Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 5.9e-285 983.4 460 100.0
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 7.2e-267 923.3 460 92.4
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 3.1e-257 891.3 460 89.3
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 3.1e-257 891.3 460 89.3
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 2.6e-256 888.3 460 88.5
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 1.7e-255 885.6 460 88.3
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 6.4e-255 883.6 461 87.6
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 1.9e-254 882.1 460 87.6
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 7.0e-254 880.2 460 87.6
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 1.0e-252 876.3 460 86.3
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 5.0e-252 874.0 460 86.5
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 8.6e-252 873.2 460 87.8
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 1.1e-251 872.8 475 84.0
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 7.3e-251 870.2 460 86.5
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 9.5e-251 869.8 461 86.6
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 3.6e-250 867.8 461 86.3
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.4e-249 865.9 461 86.3
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 1.4e-249 865.9 460 86.3
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 2.3e-249 865.1 461 86.3
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 2.3e-249 865.1 460 85.9
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 3.1e-249 864.8 460 86.1
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 4.0e-249 864.4 461 86.6
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.0e-249 864.4 460 85.9
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 2.0e-248 862.1 460 85.0
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 3.4e-248 861.3 460 84.8
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 5.8e-248 860.5 460 85.4
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 5.8e-248 860.5 460 85.7
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 5.8e-248 860.5 460 86.1
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 5.8e-248 860.5 460 85.7
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 7.5e-248 860.1 461 85.5
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 2.2e-247 858.6 460 86.1
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 4.9e-247 857.4 460 85.7
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 4.9e-247 857.4 460 85.4
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 8.3e-247 856.7 460 86.3
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 2.4e-246 855.1 460 85.2
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 3.2e-246 854.7 460 85.4
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 5.4e-246 854.0 460 84.6
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 3.5e-245 851.3 462 85.1
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 1.3e-244 849.4 460 84.3
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 1.3e-244 849.4 481 81.7
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 3.9e-244 847.8 460 84.1
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 1.5e-243 845.9 460 83.3
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 1.9e-243 845.5 460 83.5
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 1.2e-242 842.8 460 83.9
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 2.1e-242 842.0 460 83.7
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.8e-241 839.0 460 84.1
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 4.0e-241 837.8 460 84.1
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 6.8e-241 837.0 461 84.4
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 1.2e-240 836.3 462 83.8
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 2.0e-240 835.5 460 83.3
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 1.3e-239 832.8 460 82.0
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 1.3e-239 832.8 460 82.0
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 2.9e-239 831.6 458 82.5
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 4.9e-239 830.9 460 82.8
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 7.1e-238 827.0 460 81.5
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 7.1e-238 827.0 460 81.5
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 1.6e-237 825.9 460 82.8
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 1.3e-236 822.8 459 81.7
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 5.1e-236 820.8 461 79.8
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 1.2e-234 816.2 460 81.3
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 3.1e-233 811.6 460 80.0
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 6.8e-233 810.4 460 80.0
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 6.8e-233 810.4 460 81.1
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 8.9e-233 810.1 460 80.0
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 3.4e-232 808.1 460 81.1
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 1.3e-231 806.2 460 79.6
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 1.3e-231 806.2 460 79.8
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 1.7e-231 805.8 462 79.7
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 1.1e-230 803.1 449 81.5
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 4.2e-230 801.2 460 79.6
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 1.0e-228 796.6 443 81.5
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 1.3e-228 796.2 460 80.2
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 8.7e-228 793.5 487 75.6
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 4.3e-227 791.2 458 78.6
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 1.6e-226 789.3 460 80.4
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 1.1e-225 786.6 460 80.0
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 9.0e-225 783.5 460 78.3
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 7.6e-224 780.4 498 73.9
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 3.9e-220 768.1 460 78.5
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 9.9e-216 753.4 458 73.8
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 1.1e-214 750.0 464 74.1
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 5.5e-214 747.7 460 74.8
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 4.1e-201 704.9 499 66.3
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 2.5e-198 695.7 460 70.4
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 2.1e-197 692.6 458 71.8
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 2.2e-191 672.5 338 93.5
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 3.8e-191 671.8 457 66.7
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 8.5e-191 670.6 393 77.6
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.8e-188 662.9 451 66.1
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 3.3e-187 658.7 451 66.1
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.1e-185 652.1 338 89.1
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 1.5e-184 649.8 341 88.6
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.5e-184 649.8 456 64.5
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 5.5e-182 641.3 338 88.2
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.9e-181 637.5 339 86.4
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.0e-180 635.6 339 86.4
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 2.0e-179 632.9 323 91.0
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 2.6e-179 632.5 342 86.5
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 2.6e-179 632.5 342 86.5
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 6.3e-178 627.9 462 61.3
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 3.2e-174 615.5 337 84.3
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.1e-169 600.5 337 82.5
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 9.4e-166 587.4 299 89.6
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 1.0e-164 583.9 465 57.8
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 2.0e-152 543.1 300 84.0
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 1.1e-150 537.3 337 76.0
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 8.0e-149 531.2 291 84.5
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 8.0e-149 531.2 291 83.5
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 8.0e-149 531.2 313 79.9
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 4.3e-142 508.8 277 83.0
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 1.2e-133 480.7 342 62.9
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 3.4e-131 472.6 280 77.9
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 2.6e-107 393.3 450 42.4
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 3.5e-96 356.3 484 37.4
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.3e-74 284.6 157 79.6
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.4e-54 216.5 110 88.2
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.4e-54 216.5 110 88.2
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 9.7e-54 215.3 110 87.3
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 2.4e-52 210.7 185 57.3
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 1.8e-39 167.9 99 80.8
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 3.6e-08 63.9 40 67.5


User provided reference genes

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