Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0151100 Rhododendron simsii HOM05D009064 ORTHO05D010640 1.4e-105 386.3 197 100.0
CSS0028995 Camellia sinensis var. sinensis HOM05D020056 ORTHO05D010640 4.5e-16 89.0 119 53.8
CSS0018674 Camellia sinensis var. sinensis HOM05D020056 ORTHO05D010640 1.0e-15 87.8 119 52.9
Manes.07G140000 Manihot esculenta HOM05D009064 ORTHO05D010640 7.2e-14 81.6 113 46.9
Cfa001215 Carpinus fangiana HOM05D009064 ORTHO05D010640 8.0e-13 78.2 125 53.6
CiPaw.01G305700 Carya illinoinensis HOM05D009064 ORTHO05D010640 3.0e-12 76.3 128 43.0
TAR623G0979 Trochodendron aralioides HOM05D009064 ORTHO05D010640 1.1e-11 74.3 121 42.1
Hma1.2p1_2086F.1_g313715 Hydrangea macrophylla HOM05D009064 ORTHO05D010640 7.4e-11 71.6 122 44.3
Rhsim09G0184700 Rhododendron simsii HOM05D020056 ORTHO05D010640 7.4e-11 71.6 122 45.9
Haze_17348 Corylus avellana HOM05D009064 ORTHO05D010640 1.3e-10 70.9 119 44.5
Sabra13G0079500 Salix brachista HOM05D009064 ORTHO05D010640 2.8e-10 69.7 112 44.6
Duzib114G0015 Durio zibethinus HOM05D009064 ORTHO05D010640 3.7e-10 69.3 113 47.8
Medtr3g094130 Medicago truncatula HOM05D009064 ORTHO05D010640 4.1e-09 65.9 115 41.7
Thecc.10G183500 Theobroma cacao HOM05D009064 ORTHO05D010640 9.1e-09 64.7 126 42.1
Prupe.2G262900 Prunus persica HOM05D025368 ORTHO05D010640 1.2e-08 64.3 114 39.5
COL.COLO4_19449 Corchorus olitorius HOM05D009064 ORTHO05D010640 3.5e-08 62.8 129 43.4
FAN03G3397 Fragaria x ananassa HOM05D025368 ORTHO05D010640 4.5e-08 62.4 104 43.3
Potri.013G083500 Populus trichocarpa HOM05D009064 ORTHO05D010640 4.5e-08 62.4 118 39.0
FAN06G3295 Fragaria x ananassa HOM05D025368 ORTHO05D010640 7.7e-08 61.6 108 40.7
Dinv26058 Davidia involucrata HOM05D009064 ORTHO05D010640 1.7e-07 60.5 95 43.2
FAN10G4130 Fragaria x ananassa HOM05D025368 ORTHO05D010640 1.7e-07 60.5 104 44.2
Nn2g10339 Nelumbo nucifera HOM05D009064 ORTHO05D010640 2.9e-07 59.7 120 37.5
QL08p064693 Quercus lobata HOM05D026914 ORTHO05D010640 6.5e-07 58.5 116 48.3
Glyma.06G144000 Glycine max HOM05D009064 ORTHO05D010640 1.1e-06 57.8 114 37.7
Gorai.009G292900 Gossypium raimondii HOM05D009064 ORTHO05D010640 2.5e-06 56.6 114 41.2
MSTRG.27272 Avicennia marina HOM05D020056 ORTHO05D010640 7.2e-06 55.1 122 32.0
Gohir.D05G279400 Gossypium hirsutum HOM05D009064 ORTHO05D010640 7.2e-06 55.1 114 40.4


User provided reference genes

Program Settings