Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0149600 Rhododendron simsii HOM05D000609 ORTHO05D339764 1.0e-269 932.9 515 100.0
AUR62044004 Chenopodium quinoa HOM05D000609 ORTHO05D000462 4.3e-10 70.5 160 36.9
Duzib132G0836 Durio zibethinus HOM05D000609 ORTHO05D000462 3.1e-08 64.3 141 37.6
AUR62037338 Chenopodium quinoa HOM05D000609 ORTHO05D000462 5.3e-08 63.5 133 39.1
Actinidia11051 Actinidia chinensis HOM05D000609 ORTHO05D000462 6.9e-08 63.2 133 37.6
MD17G1244300 Malus domestica HOM05D000609 ORTHO05D000462 6.9e-08 63.2 163 34.4
Ah.06g183500 Amaranthus hybridus HOM05D000609 ORTHO05D000462 9.0e-08 62.8 120 36.7
Rhsim06G0147200 Rhododendron simsii HOM05D000609 ORTHO05D000462 9.0e-08 62.8 128 36.7
CSS0011861 Camellia sinensis var. sinensis HOM05D000609 ORTHO05D000462 1.2e-07 62.4 110 41.8
PSO210G6649 Papaver somniferum HOM05D000609 ORTHO05D000462 1.2e-07 62.4 162 32.7
Nn1g06634 Nelumbo nucifera HOM05D000609 ORTHO05D000462 1.5e-07 62.0 119 41.2
Actinidia09869 Actinidia chinensis HOM05D000609 ORTHO05D000462 4.5e-07 60.5 135 37.8
CSS0000647 Camellia sinensis var. sinensis HOM05D000609 ORTHO05D000462 4.5e-07 60.5 119 40.3
Carub.0003s3555 Capsella rubella HOM05D000609 ORTHO05D000462 5.9e-07 60.1 116 39.7
Migut.H01065 Erythranthe guttata HOM05D000609 ORTHO05D000462 7.7e-07 59.7 116 36.2
Thhalv10025862m.g Eutrema salsugineum HOM05D000609 ORTHO05D000462 1.0e-06 59.3 153 34.0
MSTRG.12310 Avicennia marina HOM05D000609 ORTHO05D000462 1.3e-06 58.9 132 37.1
CiPaw.03G174500 Carya illinoinensis HOM05D000609 ORTHO05D000462 1.3e-06 58.9 119 40.3
DCAR_021235 Daucus carota HOM05D000609 ORTHO05D000462 1.3e-06 58.9 119 38.7
Duzib052G0967 Durio zibethinus HOM05D000609 ORTHO05D000462 1.3e-06 58.9 136 34.6
Eucgr.K00961 Eucalyptus grandis HOM05D000609 ORTHO05D000462 1.3e-06 58.9 140 37.1
EL10Ac9g20699 Beta vulgaris HOM05D000609 ORTHO05D000462 2.2e-06 58.2 134 37.3
Gohir.A01G016300 Gossypium hirsutum HOM05D000609 ORTHO05D000462 2.2e-06 58.2 132 37.9
Gohir.D01G016300 Gossypium hirsutum HOM05D000609 ORTHO05D000462 2.2e-06 58.2 132 37.9
Gorai.002G018000 Gossypium raimondii HOM05D000609 ORTHO05D000462 2.2e-06 58.2 132 37.9
Nn1g04000 Nelumbo nucifera HOM05D000609 ORTHO05D000462 2.2e-06 58.2 117 37.6
Prupe.3G157100 Prunus persica HOM05D000609 ORTHO05D000462 2.2e-06 58.2 125 37.6
Ciclev10015144m.g Citrus clementina HOM05D000609 ORTHO05D000462 2.9e-06 57.8 117 38.5
MD09G1252000 Malus domestica HOM05D000609 ORTHO05D000462 2.9e-06 57.8 116 37.9
PGR142G3899 Punica granatum HOM05D000609 ORTHO05D000462 2.9e-06 57.8 112 41.1
DCAR_012996 Daucus carota HOM05D000609 ORTHO05D000462 3.8e-06 57.4 135 34.1
QL08p038189 Quercus lobata HOM05D000609 ORTHO05D000462 3.8e-06 57.4 126 38.1
Hma1.2p1_1201F.1_g266770 Hydrangea macrophylla HOM05D000609 ORTHO05D000462 5.0e-06 57.0 121 39.7
PGR042G1808 Punica granatum HOM05D000609 ORTHO05D000462 5.0e-06 57.0 113 38.1
AL3G54150 Arabidopsis lyrata HOM05D000609 ORTHO05D000462 6.5e-06 56.6 118 39.0
Lj1P727T48 Lonicera japonica HOM05D000609 ORTHO05D000462 6.5e-06 56.6 106 39.6
Lj1P730T46 Lonicera japonica HOM05D000609 ORTHO05D000462 6.5e-06 56.6 106 39.6
Nitab4.5_0002526g0070 Nicotiana tabacum HOM05D000609 ORTHO05D000462 6.5e-06 56.6 140 34.3
Potri.019G102200 Populus trichocarpa HOM05D000609 ORTHO05D000462 6.5e-06 56.6 118 38.1
Sp3g34150 Schrenkiella parvula HOM05D000609 ORTHO05D000462 6.5e-06 56.6 125 36.8
AT2G20880 Arabidopsis thaliana HOM05D000609 ORTHO05D000462 8.5e-06 56.2 117 38.5
CARHR111650 Cardamine hirsuta HOM05D000609 ORTHO05D000462 8.5e-06 56.2 141 34.8
Ca_01509_v3 Cicer arietinum L. HOM05D000609 ORTHO05D000462 8.5e-06 56.2 115 38.3
Glyma.12G110400 Glycine max HOM05D000609 ORTHO05D000462 8.5e-06 56.2 116 37.9
THA.LOC104824714 Tarenaya hassleriana HOM05D000609 ORTHO05D000462 8.5e-06 56.2 127 34.6


User provided reference genes

Program Settings