Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 2.1e-194 682.2 345 100.0
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 1.8e-124 449.9 368 63.9
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 3.7e-122 442.2 344 63.7
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 3.1e-121 439.1 345 64.6
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 9.7e-107 391.0 339 58.1
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 2.3e-100 369.8 341 54.5
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 3.0e-100 369.4 339 54.3
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 5.2e-100 368.6 333 54.1
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 5.7e-99 365.2 355 53.2
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 1.7e-98 363.6 355 53.2
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 4.8e-98 362.1 341 53.1
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 1.8e-97 360.1 340 54.1
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 3.1e-97 359.4 339 52.8
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 4.1e-97 359.0 344 53.5
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 1.2e-96 357.5 335 53.7
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 2.7e-96 356.3 333 53.8
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 2.2e-95 353.2 340 52.9
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 3.8e-95 352.4 331 52.6
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 3.8e-95 352.4 341 54.5
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 8.5e-95 351.3 327 52.9
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 3.2e-94 349.4 327 54.7
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 3.2e-94 349.4 340 54.4
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 1.2e-93 347.4 330 53.0
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 8.0e-93 344.7 329 51.7
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 1.0e-92 344.4 327 50.8
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 3.0e-92 342.8 344 51.7
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 1.2e-91 340.9 313 54.0
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 1.5e-91 340.5 340 48.5
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 1.5e-91 340.5 317 53.9
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 2.0e-91 340.1 343 51.3
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 7.5e-91 338.2 330 50.9
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 1.7e-90 337.0 333 48.6
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 2.8e-90 336.3 328 51.5
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 6.3e-90 335.1 319 51.4
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 8.3e-90 334.7 315 52.4
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 1.1e-89 334.3 333 49.5
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 1.4e-89 334.0 330 51.5
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 3.1e-89 332.8 320 51.6
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 4.1e-89 332.4 333 50.5
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 4.1e-89 332.4 345 51.3
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 9.1e-89 331.3 333 47.4
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 2.7e-88 329.7 257 64.6
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 1.0e-87 327.8 327 49.5
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 1.3e-87 327.4 327 49.5
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 3.8e-87 325.9 345 50.7
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 5.0e-87 325.5 320 51.2
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 8.5e-87 324.7 338 47.0
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 8.5e-87 324.7 328 49.4
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 4.2e-86 322.4 336 50.3
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 5.5e-86 322.0 324 51.2
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 7.2e-86 321.6 340 48.8
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 9.5e-86 321.2 352 48.3
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 2.3e-84 316.6 373 46.1
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 6.8e-84 315.1 316 49.7
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 6.8e-84 315.1 336 50.6
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 6.3e-82 308.5 326 46.9
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.1e-81 307.8 338 49.4
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 3.1e-81 306.2 351 47.3
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 1.6e-80 303.9 363 46.6
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 2.7e-80 303.1 334 46.1
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 2.7e-80 303.1 345 48.7
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 1.0e-79 301.2 370 43.2
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 1.0e-79 301.2 309 50.5
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 1.7e-79 300.4 334 45.5
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 1.7e-79 300.4 331 47.4
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 2.3e-79 300.1 334 45.8
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 2.3e-79 300.1 330 46.1
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 2.5e-78 296.6 332 45.5
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 4.3e-78 295.8 315 49.8
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 7.3e-78 295.0 334 44.3
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 4.7e-77 292.4 429 38.9
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 1.8e-76 290.4 320 45.9
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 3.0e-76 289.7 334 45.2
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 3.0e-76 289.7 332 44.3
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 7.5e-75 285.0 333 44.1
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 5.4e-73 278.9 333 43.2
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 9.2e-73 278.1 302 45.0
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 1.3e-71 274.2 333 42.6
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 2.5e-70 270.0 243 54.3
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 4.3e-70 269.2 238 55.0
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 2.1e-69 266.9 338 44.4
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 1.4e-68 264.2 319 44.5
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 1.4e-68 264.2 243 53.1
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 4.0e-68 262.7 242 53.3
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 8.9e-68 261.5 328 45.1
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 1.5e-67 260.8 314 42.7
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 3.4e-67 259.6 222 59.5
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 5.8e-67 258.8 238 53.4
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 8.3e-66 255.0 293 43.7
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 2.4e-65 253.4 229 54.1
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 2.4e-65 253.4 312 42.0
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 3.2e-65 253.1 246 49.6
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 7.0e-65 251.9 236 47.9
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 1.2e-64 251.1 238 52.1
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 2.0e-64 250.4 236 47.9
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 6.0e-64 248.8 288 45.5
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 1.3e-63 247.7 330 39.4
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 1.3e-63 247.7 358 42.2
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 1.5e-62 244.2 246 48.0
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 8.9e-60 235.0 265 44.2
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 3.0e-55 219.9 216 50.0
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 2.0e-51 207.2 409 33.7
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 5.8e-51 205.7 158 65.2
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 2.8e-45 186.8 276 37.7
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 8.1e-45 185.3 346 34.7
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 6.9e-44 182.2 246 40.2
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 9.0e-44 181.8 268 38.8
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 5.8e-43 179.1 350 32.0
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 1.9e-38 164.1 326 31.0
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 1.4e-33 147.9 244 37.3
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 1.1e-25 121.7 152 44.7
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 2.7e-24 117.1 218 30.3
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 3.0e-23 113.6 218 35.3
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 5.1e-23 112.8 244 27.9
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 7.4e-22 109.0 248 33.9
SEGI_38425 Sequoiadendron giganteum HOM05D006653 ORTHO05D008346 1.2e-16 91.7 78 50.0
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 2.7e-16 90.5 303 24.4
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 3.7e-13 80.1 128 36.7
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 5.3e-12 76.3 77 46.8
CDE04G0201 Ceratophyllum demersum HOM05D002034 ORTHO05D006399 1.9e-06 57.8 74 40.5
Rhsim08G0184200 Rhododendron simsii HOM05D006653 ORTHO05D339565 2.5e-06 57.4 91 40.7
HanXRQChr08g0221941 Helianthus annuus HOM05D006653 ORTHO05D008346 5.7e-06 56.2 68 48.5


User provided reference genes

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