Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0137700 Rhododendron simsii HOM05D001751 ORTHO05D338614 7.3e-92 340.9 217 100.0
vmacro07014 Vaccinium macrocarpon HOM05D001360 ORTHO05D001231 3.3e-12 76.3 117 43.6
CSS0048241 Camellia sinensis var. sinensis HOM05D001751 ORTHO05D001672 1.2e-09 67.8 71 52.1
Dinv16276 Davidia involucrata HOM05D001751 ORTHO05D001672 1.2e-09 67.8 71 52.1
CSS0025476 Camellia sinensis var. sinensis HOM05D001751 ORTHO05D001672 2.6e-09 66.6 71 50.7
vmacro10196 Vaccinium macrocarpon HOM05D001751 ORTHO05D001672 4.5e-09 65.9 71 52.1
Manes.09G098600 Manihot esculenta HOM05D001751 ORTHO05D001672 5.9e-09 65.5 72 52.8
Hma1.2p1_0039F.1_g024900 Hydrangea macrophylla HOM05D001751 ORTHO05D001672 2.2e-08 63.5 70 51.4
Lsat_1_v5_gn_2_117100 Lactuca sativa HOM05D001751 ORTHO05D001672 3.8e-08 62.8 71 50.7
Atru.chr8.2092 Acer truncatum HOM05D001751 ORTHO05D001672 5.0e-08 62.4 72 48.6
CANSAT56G0758 Cannabis sativa HOM05D001751 ORTHO05D001672 6.5e-08 62.0 72 48.6
MD07G1207500 Malus domestica HOM05D001751 ORTHO05D001672 6.5e-08 62.0 91 42.9
GSVIVG01016435001 Vitis vinifera HOM05D001751 ORTHO05D001672 6.5e-08 62.0 70 48.6
CSS0001797 Camellia sinensis var. sinensis HOM05D001751 ORTHO05D001672 8.5e-08 61.6 62 53.2
Ah.16g102780 Amaranthus hybridus HOM05D001360 ORTHO05D001231 1.1e-07 61.2 71 50.7
COL.COLO4_14693 Corchorus olitorius HOM05D001751 ORTHO05D001672 1.1e-07 61.2 71 50.7
Rhsim09G0170400 Rhododendron simsii HOM05D001751 ORTHO05D001672 1.4e-07 60.8 71 47.9
Sabra08G0045400 Salix brachista HOM05D001751 ORTHO05D001672 1.4e-07 60.8 72 47.2
CANSAT35G0577 Cannabis sativa HOM05D001751 ORTHO05D001672 1.9e-07 60.5 70 50.0
Cfa001398 Carpinus fangiana HOM05D001751 ORTHO05D001672 1.9e-07 60.5 71 49.3
PGR142G2952 Punica granatum HOM05D001751 ORTHO05D001672 1.9e-07 60.5 71 49.3
Thecc.10G031200 Theobroma cacao HOM05D001751 ORTHO05D001672 1.9e-07 60.5 72 48.6
vmacro10195 Vaccinium macrocarpon HOM05D001751 ORTHO05D001672 1.9e-07 60.5 71 49.3
DCAR_011756 Daucus carota HOM05D001751 ORTHO05D001672 2.5e-07 60.1 72 43.1
ECA238G2034 Erigeron canadensis HOM05D001360 ORTHO05D001672 2.5e-07 60.1 71 47.9
Potri.008G061800 Populus trichocarpa HOM05D001751 ORTHO05D001672 2.5e-07 60.1 72 45.8
Atru.chr12.268 Acer truncatum HOM05D001751 ORTHO05D001672 3.2e-07 59.7 71 52.1
Haze_20894 Corylus avellana HOM05D001751 ORTHO05D001672 4.2e-07 59.3 72 45.8
Prupe.2G242800 Prunus persica HOM05D001751 ORTHO05D001672 4.2e-07 59.3 71 49.3
Cfa001400 Carpinus fangiana HOM05D001751 ORTHO05D001672 5.5e-07 58.9 71 47.9
Gohir.D11G347000 Gossypium hirsutum HOM05D001751 ORTHO05D001672 9.4e-07 58.2 71 46.5
HanXRQChr07g0202031 Helianthus annuus HOM05D001751 ORTHO05D001672 9.4e-07 58.2 71 46.5
MD12G1154900 Malus domestica HOM05D001751 ORTHO05D001672 9.4e-07 58.2 70 45.7
Dinv37113 Davidia involucrata HOM05D001751 ORTHO05D001672 1.2e-06 57.8 71 47.9
Gohir.A05G346800 Gossypium hirsutum HOM05D001751 ORTHO05D001672 1.2e-06 57.8 71 49.3
Gorai.012G073600 Gossypium raimondii HOM05D001751 ORTHO05D001672 1.2e-06 57.8 71 49.3
HanXRQChr14g0458461 Helianthus annuus HOM05D001751 ORTHO05D001672 1.2e-06 57.8 65 50.8
Potri.010G196300 Populus trichocarpa HOM05D001751 ORTHO05D001672 1.2e-06 57.8 67 49.3
FvH4_7g23600 Fragaria vesca HOM05D001751 ORTHO05D001672 1.6e-06 57.4 72 45.8
FAN06G4386 Fragaria x ananassa HOM05D001751 ORTHO05D001672 1.6e-06 57.4 72 45.8
FAN06G4821 Fragaria x ananassa HOM05D001751 ORTHO05D001672 1.6e-06 57.4 72 45.8
RcHm_v2.0_Chr1g0368841 Rosa chinensis HOM05D001751 ORTHO05D001672 1.6e-06 57.4 72 44.4
Cpa.g.sc17.158 Carica papaya HOM05D001751 ORTHO05D001672 2.1e-06 57.0 72 48.6
Haze_20885 Corylus avellana HOM05D001751 ORTHO05D001672 2.1e-06 57.0 72 44.4
Gorai.007G377400 Gossypium raimondii HOM05D001751 ORTHO05D001672 2.1e-06 57.0 71 46.5
Sabra10G0150900 Salix brachista HOM05D001751 ORTHO05D001672 2.1e-06 57.0 67 47.8
TPR.G34920 Trifolium pratense HOM05D001751 ORTHO05D001672 2.1e-06 57.0 72 47.2
Actinidia28656 Actinidia chinensis HOM05D001751 ORTHO05D001672 2.7e-06 56.6 71 45.1
Cc02_g07220 Coffea canephora HOM05D001751 ORTHO05D001672 2.7e-06 56.6 71 46.5
TPR.G34927 Trifolium pratense HOM05D001751 ORTHO05D001672 2.7e-06 56.6 72 47.2
AUR62022801 Chenopodium quinoa HOM05D001751 ORTHO05D001672 3.6e-06 56.2 71 46.5
Ca_07571_v3 Cicer arietinum L. HOM05D001751 ORTHO05D001672 3.6e-06 56.2 67 49.3
Duzib106G0083 Durio zibethinus HOM05D001751 ORTHO05D001672 3.6e-06 56.2 71 46.5
Duzib106G0665 Durio zibethinus HOM05D001751 ORTHO05D001672 3.6e-06 56.2 71 46.5
Duzib106G0808 Durio zibethinus HOM05D001751 ORTHO05D001672 3.6e-06 56.2 71 46.5
Duzib106G1524 Durio zibethinus HOM05D001751 ORTHO05D001672 3.6e-06 56.2 71 46.5
Gohir.D04G065400 Gossypium hirsutum HOM05D001751 ORTHO05D001672 3.6e-06 56.2 71 47.9
Lsat_1_v5_gn_9_63001 Lactuca sativa HOM05D001751 ORTHO05D001672 3.6e-06 56.2 71 45.1
Solyc03g079880.4 Solanum lycopersicum HOM05D001751 ORTHO05D001672 3.6e-06 56.2 71 43.7
AUR62012164 Chenopodium quinoa HOM05D001751 ORTHO05D001672 6.1e-06 55.5 71 46.5
PGR004G0216 Punica granatum HOM05D001751 ORTHO05D001672 6.1e-06 55.5 71 46.5
TAR633G1255 Trochodendron aralioides HOM05D001751 ORTHO05D001672 6.1e-06 55.5 71 45.1
Phvul.008G113900 Phaseolus vulgaris HOM05D001751 ORTHO05D001672 7.9e-06 55.1 67 44.8


User provided reference genes

Program Settings