Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0134300 Rhododendron simsii HOM05D008183 ORTHO05D007254 5.9e-89 330.9 170 100.0
Rhsim07G0138700 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.0e-36 156.4 158 54.4
vmacro20413 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 6.0e-33 144.8 133 55.6
vmacro20957 Vaccinium macrocarpon HOM05D003698 ORTHO05D004320 1.5e-28 130.2 117 55.6
CSS0007562 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.7e-24 116.7 125 48.8
CSS0039886 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.5e-23 113.6 150 37.3
Rhsim11G0009800 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.5e-23 112.8 125 50.4
CSS0012014 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.1e-22 109.8 139 40.3
CSS0013917 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.6e-22 109.0 139 41.0
Rhsim03G0084200 Rhododendron simsii HOM05D008183 ORTHO05D007254 3.6e-22 109.0 130 44.6
CSS0027326 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.7e-22 108.6 144 43.1
RhsimUnG0047500 Rhododendron simsii HOM05D008183 ORTHO05D007254 8.1e-22 107.8 125 48.0
CSS0024246 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.4e-21 107.1 142 38.0
Rhsim03G0019700 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.4e-21 107.1 130 46.2
Rhsim03G0019800 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.4e-21 107.1 130 46.2
Rhsim13G0004500 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.8e-21 106.7 129 44.2
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.4e-21 106.3 129 44.2
Rhsim01G0155500 Rhododendron simsii HOM05D000003 ORTHO05D007254 6.9e-21 104.8 129 43.4
Rhsim08G0082000 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.2e-20 104.0 115 48.7
vmacro23070 Vaccinium macrocarpon HOM05D000626 ORTHO05D007254 2.6e-20 102.8 110 50.0
CSS0013490 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.4e-20 102.1 142 37.3
Rhsim12G0010300 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.9e-18 96.7 131 40.5
CSS0008839 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.2e-18 95.9 137 40.9
CSS0014976 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.2e-18 95.5 129 39.5
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 7.1e-18 94.7 125 42.4
CSS0036610 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 1.2e-17 94.0 138 37.0
Rhsim04G0100600 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.6e-17 93.6 102 47.1
vmacro06821 Vaccinium macrocarpon HOM05D001548 ORTHO05D003901 2.7e-17 92.8 106 50.0
Rhsim01G0063000 Rhododendron simsii HOM05D008183 ORTHO05D007254 3.9e-16 89.0 125 41.6
CSS0000077 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 5.1e-16 88.6 139 36.0
Rhsim02G0203700 Rhododendron simsii HOM05D000001 ORTHO05D009494 5.1e-16 88.6 101 46.5
vmacro21152 Vaccinium macrocarpon HOM05D003664 ORTHO05D003077 5.1e-16 88.6 133 37.6
Lj1P1217T36 Lonicera japonica HOM05D008183 ORTHO05D007254 2.5e-15 86.3 131 32.8
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 3.3e-15 85.9 123 41.5
CSS0036848 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.6e-14 83.6 97 44.3
Lju110C5T8 Lonicera japonica HOM05D008183 ORTHO05D007254 4.8e-14 82.0 117 36.8
CSS0000654 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 6.2e-14 81.6 155 32.9
CSS0023048 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 6.2e-14 81.6 139 36.7
Lj1P289T15 Lonicera japonica HOM05D008183 ORTHO05D007254 6.2e-14 81.6 123 35.0
vmacro18048 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 6.2e-14 81.6 78 55.1
Lj2C65T12 Lonicera japonica HOM05D008183 ORTHO05D007254 8.1e-14 81.3 130 34.6
Rhsim03G0017000 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.1e-13 80.9 88 48.9
CSS0019282 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.4e-13 80.5 83 51.8
CSS0043494 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.4e-13 80.5 133 37.6
CSS0022949 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.1e-13 79.3 133 33.8
CSS0037115 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.0e-13 79.0 131 36.6
RhsimUnG0189600 Rhododendron simsii HOM05D000038 ORTHO05D000423 9.0e-13 77.8 64 59.4
CSS0027596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.8e-12 75.1 101 41.6
CSS0040440 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 5.8e-12 75.1 102 37.3
Rhsim12G0201300 Rhododendron simsii HOM05D002908 ORTHO05D009379 7.6e-12 74.7 79 50.6
Lj4C77T3 Lonicera japonica HOM05D008183 ORTHO05D007254 9.9e-12 74.3 118 35.6
Rhsim03G0129900 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.3e-11 73.9 82 47.6
CSS0016507 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.7e-11 73.6 133 33.8
CSS0035533 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.7e-11 73.6 84 47.6
Lj3P1014T21 Lonicera japonica HOM05D008183 ORTHO05D007254 2.2e-11 73.2 111 33.3
CSS0029699 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 4.9e-11 72.0 102 37.3
CSS0049610 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 6.4e-11 71.6 102 35.3
CSS0035557 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D000004 8.4e-11 71.2 81 43.2
CSS0048899 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.1e-10 70.9 131 34.4
Lj3P354T13 Lonicera japonica HOM05D008183 ORTHO05D007254 1.1e-10 70.9 92 38.0
CSS0041363 Camellia sinensis var. sinensis HOM05D001340 ORTHO05D002318 1.9e-10 70.1 112 38.4
CSS0001686 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.4e-10 69.7 80 45.0
Lj2C40G9 Lonicera japonica HOM05D008183 ORTHO05D007254 4.2e-10 68.9 138 29.7
Lj3P854T34 Lonicera japonica HOM05D008183 ORTHO05D007254 4.2e-10 68.9 100 38.0
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 1.2e-09 67.4 80 45.0
CSS0048373 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.1e-09 66.6 142 32.4
Rhsim01G0064200 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.1e-09 66.6 129 34.1
CSS0034453 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 7.9e-09 64.7 148 31.1
Lj1g0019137 Lotus japonicus HOM05D000003 ORTHO05D007254 1.0e-08 64.3 146 31.5
CSS0002638 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.3e-08 63.9 99 40.4
CSS0025139 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.3e-08 63.9 99 40.4
COL.COLO4_15583 Corchorus olitorius HOM05D000003 ORTHO05D000004 2.3e-08 63.2 130 33.1
Lj1P1006T30 Lonicera japonica HOM05D008183 ORTHO05D007254 2.3e-08 63.2 121 32.2
COL.COLO4_07023 Corchorus olitorius HOM05D000003 ORTHO05D000004 3.0e-08 62.8 138 32.6
vmacro01134 Vaccinium macrocarpon HOM05D000740 ORTHO05D003236 3.0e-08 62.8 108 38.9
FvH4_6g30670 Fragaria vesca HOM05D021529 ORTHO05D009449 1.1e-07 60.8 133 29.3
Lj1P880T38 Lonicera japonica HOM05D008183 ORTHO05D007254 1.5e-07 60.5 102 32.4
vmacro05176 Vaccinium macrocarpon HOM05D000646 ORTHO05D009105 1.9e-07 60.1 51 62.7
Lj8P205T42 Lonicera japonica HOM05D008183 ORTHO05D007254 2.5e-07 59.7 91 34.1
RcHm_v2.0_Chr1g0367181 Rosa chinensis HOM05D017965 ORTHO05D009449 4.3e-07 58.9 127 34.6
vmacro01918 Vaccinium macrocarpon HOM05D008183 ORTHO05D007254 9.6e-07 57.8 67 41.8
Lj7P396T52 Lonicera japonica HOM05D008183 ORTHO05D007254 1.6e-06 57.0 102 30.4
Lj9P645T45 Lonicera japonica HOM05D008183 ORTHO05D007254 1.6e-06 57.0 91 35.2
Nn3g18091 Nelumbo nucifera HOM05D030777 ORTHO05D000167 1.6e-06 57.0 136 30.1
CSS0033631 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 2.1e-06 56.6 60 48.3
CSS0034752 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 2.8e-06 56.2 153 28.1
Rhsim03G0007500 Rhododendron simsii HOM05D033359 ORTHO05D340347 3.7e-06 55.8 92 37.0
PSO832G1772 Papaver somniferum HOM05D007919 ORTHO05D006738 4.8e-06 55.5 91 37.4
vmacro05982 Vaccinium macrocarpon HOM05D002315 ORTHO05D002416 6.2e-06 55.1 76 38.2


User provided reference genes

Program Settings