Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0129900 Rhododendron simsii HOM05D008183 ORTHO05D007254 6.9e-75 283.9 143 100.0
Rhsim03G0019700 Rhododendron simsii HOM05D008183 ORTHO05D007254 7.5e-13 77.8 87 47.1
Rhsim03G0019800 Rhododendron simsii HOM05D008183 ORTHO05D007254 7.5e-13 77.8 87 47.1
vmacro06821 Vaccinium macrocarpon HOM05D001548 ORTHO05D003901 1.3e-12 77.0 86 51.2
RhsimUnG0047500 Rhododendron simsii HOM05D008183 ORTHO05D007254 6.4e-12 74.7 84 46.4
CSS0039886 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 8.3e-12 74.3 88 44.3
vmacro20957 Vaccinium macrocarpon HOM05D003698 ORTHO05D004320 1.4e-11 73.6 79 49.4
Rhsim03G0134300 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.9e-11 73.2 82 47.6
Rhsim07G0138700 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.1e-11 72.0 88 44.3
Rhsim08G0082000 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.1e-11 72.0 87 44.8
CSS0035557 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D000004 7.1e-11 71.2 78 43.6
vmacro23070 Vaccinium macrocarpon HOM05D000626 ORTHO05D007254 7.1e-11 71.2 69 53.6
CSS0019282 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.6e-10 70.1 69 46.4
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 3.5e-10 68.9 87 42.5
CSS0008839 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.6e-10 68.6 80 41.2
Rhsim11G0009800 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.6e-10 68.6 81 46.9
CSS0013917 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 7.8e-10 67.8 81 40.7
CSS0012014 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.3e-09 67.0 81 39.5
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 3.9e-09 65.5 87 42.5
vmacro20413 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 5.1e-09 65.1 84 40.5
CSS0036848 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 6.6e-09 64.7 82 39.0
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.6e-09 64.7 83 42.2
Rhsim13G0004500 Rhododendron simsii HOM05D008183 ORTHO05D007254 6.6e-09 64.7 83 42.2
vmacro18418 Vaccinium macrocarpon HOM05D001533 ORTHO05D005122 6.6e-09 64.7 63 50.8
Rhsim01G0155500 Rhododendron simsii HOM05D000003 ORTHO05D007254 1.9e-08 63.2 83 41.0
CSS0024246 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 5.6e-08 61.6 83 44.6
Rhsim03G0084200 Rhododendron simsii HOM05D008183 ORTHO05D007254 5.6e-08 61.6 82 40.2
CSS0007562 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.6e-07 60.1 85 36.5
Rhsim12G0010300 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.6e-07 60.1 85 40.0
CSS0027326 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.7e-07 58.5 75 38.7
vmacro15230 Vaccinium macrocarpon HOM05D000127 ORTHO05D000243 6.2e-07 58.2 45 57.8
CSS0014976 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.1e-06 57.4 82 39.0
RhsimUnG0189600 Rhododendron simsii HOM05D000038 ORTHO05D000423 1.4e-06 57.0 64 43.8
CSS0013490 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.8e-06 56.6 83 41.0
CSS0029699 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 2.4e-06 56.2 81 34.6
CSS0040440 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 2.4e-06 56.2 81 33.3
CSS0041363 Camellia sinensis var. sinensis HOM05D001340 ORTHO05D002318 2.4e-06 56.2 70 41.4
Rhsim01G0064200 Rhododendron simsii HOM05D008183 ORTHO05D007254 3.1e-06 55.8 125 30.4


User provided reference genes

Program Settings