Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0129100 Rhododendron simsii HOM05D007209 ORTHO05D000921 6.8e-90 334.0 166 100.0
Rhsim12G0067000 Rhododendron simsii HOM05D000034 ORTHO05D000037 9.5e-76 287.0 165 86.1
Rhsim08G0139300 Rhododendron simsii HOM05D000251 ORTHO05D007889 2.7e-70 268.9 153 90.8
Rhsim03G0151700 Rhododendron simsii HOM05D000114 ORTHO05D000037 5.1e-61 238.0 165 73.9
Rhsim01G0206100 Rhododendron simsii HOM05D007209 ORTHO05D000921 1.3e-51 206.8 177 66.7
Rhsim01G0206000 Rhododendron simsii HOM05D007209 ORTHO05D000921 6.4e-48 194.5 102 94.1
vmacro19172 Vaccinium macrocarpon HOM05D005764 ORTHO05D006600 6.2e-43 177.9 161 59.6
vmacro18043 Vaccinium macrocarpon HOM05D007209 ORTHO05D000005 5.8e-41 171.4 114 74.6
Rhsim08G0112700 Rhododendron simsii HOM05D007209 ORTHO05D000921 1.3e-40 170.2 98 90.8
vmacro19171 Vaccinium macrocarpon HOM05D005764 ORTHO05D006600 9.0e-34 147.5 137 60.6
Rhsim04G0134000 Rhododendron simsii HOM05D000034 ORTHO05D000037 4.2e-23 112.1 182 40.7
vmacro05171 Vaccinium macrocarpon HOM05D004340 ORTHO05D006363 4.6e-22 108.6 192 35.4
MELO3C030897.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.3e-21 107.1 166 41.0
Actinidia24178 Actinidia chinensis HOM05D013777 ORTHO05D000921 3.0e-21 105.9 176 37.5
Rhsim12G0122900 Rhododendron simsii HOM05D000034 ORTHO05D000037 5.7e-20 101.7 182 39.6
Dinv20825 Davidia involucrata HOM05D007209 ORTHO05D000921 9.7e-20 100.9 176 35.8
Dinv01169 Davidia involucrata HOM05D007209 ORTHO05D000921 2.8e-19 99.4 171 34.5
Actinidia05403 Actinidia chinensis HOM05D013777 ORTHO05D000921 8.2e-19 97.8 178 36.5
ClCG03G011480 Citrullus lanatus HOM05D007209 ORTHO05D000921 8.2e-19 97.8 161 39.1
Dinv32776 Davidia involucrata HOM05D007209 ORTHO05D000921 8.2e-19 97.8 174 34.5
ClCG07G007780 Citrullus lanatus HOM05D007209 ORTHO05D000921 4.1e-18 95.5 158 36.7
TAR080G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 4.1e-18 95.5 182 33.0
MELO3C029648.2 Cucumis melo HOM05D007209 ORTHO05D000921 5.3e-18 95.1 163 36.2
MELO3C031338.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.5e-17 93.6 162 35.8
CSS0009073 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 4.5e-17 92.0 178 36.5
MELO3C030714.2 Cucumis melo HOM05D007209 ORTHO05D000921 7.7e-17 91.3 156 36.5
MELO3C034280.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.9e-16 89.4 163 37.4
Hma1.2p1_0805F.1_g221293 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 3.8e-16 89.0 173 34.1
Hma1.2p1_0805F.1_g221299 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 3.8e-16 89.0 173 34.1
TAR599G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 6.5e-16 88.2 163 33.7
TAR597G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 8.5e-16 87.8 165 33.9
Hma1.2p1_0309F.1_g120595 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 1.4e-15 87.0 173 34.1
MELO3C032092.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.2e-15 85.9 151 38.4
Dinv05467 Davidia involucrata HOM05D007209 ORTHO05D000921 4.2e-15 85.5 164 34.8
Sed0011521 Sechium edule HOM05D007209 ORTHO05D000921 2.7e-14 82.8 170 33.5
MELO3C030185.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.6e-14 82.4 162 35.2
ClCG10G015090 Citrullus lanatus HOM05D007209 ORTHO05D000921 6.1e-14 81.6 171 31.6
AUR62040593 Chenopodium quinoa HOM05D007209 ORTHO05D000921 7.9e-14 81.3 171 30.4
MELO3C035563.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.4e-13 80.5 163 35.6
ClCG03G008640 Citrullus lanatus HOM05D007209 ORTHO05D000921 1.8e-13 80.1 141 33.3
MELO3C028998.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.0e-13 79.3 163 34.4
AUR62037953 Chenopodium quinoa HOM05D007209 ORTHO05D000921 2.2e-11 73.2 162 29.6
MELO3C033912.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.7e-11 72.4 163 31.9
MELO3C009866.2 Cucumis melo HOM05D007209 ORTHO05D000921 4.8e-11 72.0 170 34.1
CsaV3_3G041440 Cucumis sativus L. HOM05D007209 ORTHO05D000921 8.2e-11 71.2 173 34.7
ClCG09G017130 Citrullus lanatus HOM05D007209 ORTHO05D000921 1.8e-10 70.1 107 38.3
MELO3C030181.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.8e-10 70.1 155 32.9
MELO3C035609.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.8e-10 70.1 113 34.5
Dinv27628 Davidia involucrata HOM05D007209 ORTHO05D000921 1.8e-10 70.1 137 34.3
Sed0003641 Sechium edule HOM05D000034 ORTHO05D000037 6.9e-10 68.2 94 40.4
Sed0024451 Sechium edule HOM05D007209 ORTHO05D000921 6.9e-10 68.2 171 29.8
Dinv13268 Davidia involucrata HOM05D000097 ORTHO05D000041 9.1e-10 67.8 113 33.6
Actinidia23315 Actinidia chinensis HOM05D013777 ORTHO05D000921 1.2e-09 67.4 165 30.3
COL.COLO4_05628 Corchorus olitorius HOM05D007209 ORTHO05D000921 1.5e-09 67.0 188 29.8
Lj1g0016199 Lotus japonicus HOM05D007209 ORTHO05D000921 2.0e-09 66.6 162 29.0
Dinv23928 Davidia involucrata HOM05D007209 ORTHO05D000921 5.9e-09 65.1 102 31.4
CANSAT54G0727 Cannabis sativa HOM05D007209 ORTHO05D000921 7.7e-09 64.7 173 27.7
Lj2g0013227 Lotus japonicus HOM05D007209 ORTHO05D000921 1.1e-07 60.8 164 26.2
RcHm_v2.0_Chr1g0346821 Rosa chinensis HOM05D009879 ORTHO05D009647 1.1e-07 60.8 126 28.6
RcHm_v2.0_Chr1g0346841 Rosa chinensis HOM05D009879 ORTHO05D009647 1.1e-07 60.8 126 28.6
COL.COLO4_33426 Corchorus olitorius HOM05D007209 ORTHO05D000921 1.4e-07 60.5 184 29.3
LjContig00141g0014815 Lotus japonicus HOM05D007209 ORTHO05D000921 2.5e-07 59.7 166 26.5
COL.COLO4_35876 Corchorus olitorius HOM05D007209 ORTHO05D000921 3.2e-07 59.3 182 29.1
MELO3C035039.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.2e-07 59.3 91 39.6
COL.COLO4_20107 Corchorus olitorius HOM05D007209 ORTHO05D000921 4.2e-07 58.9 184 27.2
Sed0007988 Sechium edule HOM05D007209 ORTHO05D000921 7.2e-07 58.2 160 28.1
MELO3C034270.2 Cucumis melo HOM05D007209 ORTHO05D000921 9.4e-07 57.8 91 37.4
MELO3C034962.2 Cucumis melo HOM05D007209 ORTHO05D000921 9.4e-07 57.8 91 40.7
Actinidia40049 Actinidia chinensis HOM05D013777 ORTHO05D000921 2.1e-06 56.6 91 34.1
AUR62042144 Chenopodium quinoa HOM05D007209 ORTHO05D000921 2.7e-06 56.2 162 25.9
AUR62024947 Chenopodium quinoa HOM05D007209 ORTHO05D000921 4.7e-06 55.5 113 29.2
MD17G1072500 Malus domestica HOM05D000005 ORTHO05D000012 6.1e-06 55.1 71 38.0
CANSAT25G0660 Cannabis sativa HOM05D000665 ORTHO05D000921 7.9e-06 54.7 159 26.4
Glyma.15G120200 Glycine max HOM05D007209 ORTHO05D000921 7.9e-06 54.7 171 25.7


User provided reference genes

Program Settings