Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0127600 Rhododendron simsii HOM05D000970 ORTHO05D000788 5.7e-52 207.2 98 100.0
Actinidia02985 Actinidia chinensis HOM05D000970 ORTHO05D000788 1.4e-10 69.7 61 60.7
CSS0021743 Camellia sinensis var. sinensis HOM05D000970 ORTHO05D000788 1.4e-10 69.7 62 58.1
COL.COLO4_10913 Corchorus olitorius HOM05D000970 ORTHO05D000788 9.1e-10 67.0 61 54.1
Actinidia16956 Actinidia chinensis HOM05D000970 ORTHO05D000788 1.2e-09 66.6 62 58.1
Dinv31403 Davidia involucrata HOM05D000970 ORTHO05D000788 1.6e-09 66.2 65 56.9
COL.COLO4_20177 Corchorus olitorius HOM05D000970 ORTHO05D000788 3.5e-09 65.1 61 54.1
Nn2g12859 Nelumbo nucifera HOM05D000970 ORTHO05D000788 3.5e-09 65.1 62 58.1
Ah.16g107670 Amaranthus hybridus HOM05D000970 ORTHO05D000788 1.7e-08 62.8 65 53.8
Lj7P133T20 Lonicera japonica HOM05D000970 ORTHO05D000788 1.7e-08 62.8 62 54.8
Thecc.10G058800 Theobroma cacao HOM05D000970 ORTHO05D000788 1.7e-08 62.8 63 52.4
Duzib114G0623 Durio zibethinus HOM05D000970 ORTHO05D000788 2.2e-08 62.4 63 52.4
GSVIVG01005968001 Vitis vinifera HOM05D000970 ORTHO05D000788 2.2e-08 62.4 59 55.9
Duzib106G0409 Durio zibethinus HOM05D000970 ORTHO05D000788 2.9e-08 62.0 63 50.8
ClCG02G013480 Citrullus lanatus HOM05D000970 ORTHO05D000788 3.8e-08 61.6 65 52.3
Haze_16987 Corylus avellana HOM05D000970 ORTHO05D000788 5.0e-08 61.2 67 49.3
Ah.05g172690 Amaranthus hybridus HOM05D000970 ORTHO05D000788 6.5e-08 60.8 64 51.6
DCAR_027687 Daucus carota HOM05D000970 ORTHO05D000788 8.5e-08 60.5 64 50.0
DCAR_027688 Daucus carota HOM05D000970 ORTHO05D000788 8.5e-08 60.5 64 50.0
HanXRQChr07g0200771 Helianthus annuus HOM05D000970 ORTHO05D000788 8.5e-08 60.5 61 54.1
Lj8A90G51 Lonicera japonica HOM05D000970 ORTHO05D000788 8.5e-08 60.5 62 54.8
PGR044G1313 Punica granatum HOM05D000970 ORTHO05D000788 8.5e-08 60.5 65 52.3
TAR369G0640 Trochodendron aralioides HOM05D000970 ORTHO05D000788 8.5e-08 60.5 62 53.2
Hma1.2p1_0402F.1_g145160 Hydrangea macrophylla HOM05D000970 ORTHO05D000788 1.1e-07 60.1 64 51.6
Aqoxy4G03058 Aquilegia oxysepala HOM05D000970 ORTHO05D000788 1.5e-07 59.7 66 51.5
Nn6g32396 Nelumbo nucifera HOM05D000970 ORTHO05D000788 1.5e-07 59.7 62 53.2
TWI38G1439 Tripterygium wilfordii HOM05D000970 ORTHO05D000788 1.5e-07 59.7 63 50.8
Cpa.g.sc1.327 Carica papaya HOM05D000970 ORTHO05D000788 1.9e-07 59.3 47 59.6
Migut.F02115 Erythranthe guttata HOM05D000970 ORTHO05D000788 1.9e-07 59.3 65 49.2
TWI63G0765 Tripterygium wilfordii HOM05D000970 ORTHO05D000788 1.9e-07 59.3 64 50.0
Oeu016151.1 Olea europaea HOM05D000970 ORTHO05D000788 2.5e-07 58.9 62 50.0
SGA_v2.0_scaffold62G21496 Striga asiatica HOM05D000970 ORTHO05D000788 2.5e-07 58.9 63 50.8
CiPaw.01G281300 Carya illinoinensis HOM05D000970 ORTHO05D000788 3.2e-07 58.5 66 47.0
Ciclev10033309m.g Citrus clementina HOM05D000970 ORTHO05D000788 3.2e-07 58.5 67 49.3
MELO3C023825.2 Cucumis melo HOM05D000970 ORTHO05D000788 3.2e-07 58.5 65 50.8
Cfa001546 Carpinus fangiana HOM05D000970 ORTHO05D000788 4.2e-07 58.2 67 47.8
MD07G1189200 Malus domestica HOM05D000970 ORTHO05D000788 4.2e-07 58.2 61 50.8
Manes.07G109200 Manihot esculenta HOM05D000970 ORTHO05D000788 4.2e-07 58.2 61 52.5
Peaxi162Scf00060g00047 Petunia axillaris HOM05D000970 ORTHO05D000788 4.2e-07 58.2 61 50.8
Atru.chr12.573 Acer truncatum HOM05D000970 ORTHO05D000788 5.5e-07 57.8 66 48.5
AUR62022534 Chenopodium quinoa HOM05D000970 ORTHO05D000788 5.5e-07 57.8 64 48.4
AUR62035963 Chenopodium quinoa HOM05D000970 ORTHO05D000788 5.5e-07 57.8 64 48.4
Eucgr.G02765 Eucalyptus grandis HOM05D000970 ORTHO05D000788 5.5e-07 57.8 64 48.4
HanXRQChr12g0370701 Helianthus annuus HOM05D000970 ORTHO05D000788 5.5e-07 57.8 61 50.8
Rhsim09G0158200 Rhododendron simsii HOM05D000970 ORTHO05D000788 5.5e-07 57.8 65 53.8
RcHm_v2.0_Chr1g0365391 Rosa chinensis HOM05D000970 ORTHO05D000788 5.5e-07 57.8 57 52.6
Atru.chr3.3806 Acer truncatum HOM05D000970 ORTHO05D000788 7.2e-07 57.4 56 51.8
EL10Ac2g03466 Beta vulgaris HOM05D000970 ORTHO05D000788 7.2e-07 57.4 64 50.0
Duzib150G0970 Durio zibethinus HOM05D000970 ORTHO05D000788 7.2e-07 57.4 63 47.6
Prupe.2G226700 Prunus persica HOM05D000970 ORTHO05D000788 7.2e-07 57.4 59 50.8
FvH4_7g21000 Fragaria vesca HOM05D000970 ORTHO05D000788 1.2e-06 56.6 57 52.6
FAN06G1490 Fragaria x ananassa HOM05D000970 ORTHO05D000788 1.2e-06 56.6 57 52.6
FAN06G2063 Fragaria x ananassa HOM05D000970 ORTHO05D000788 1.2e-06 56.6 57 52.6
FAN10G2425 Fragaria x ananassa HOM05D000970 ORTHO05D000788 1.2e-06 56.6 57 52.6
Peaxi162Scf00015g00232 Petunia axillaris HOM05D000970 ORTHO05D000788 1.2e-06 56.6 65 52.3
Cc02_g08530 Coffea canephora HOM05D000970 ORTHO05D000788 1.6e-06 56.2 66 53.0
Medtr1g115510 Medicago truncatula HOM05D000970 ORTHO05D000788 1.6e-06 56.2 61 50.8
MBI14_g44801_MAGBIO Magnolia biondii HOM05D000970 ORTHO05D000788 2.1e-06 55.8 53 52.8
MD01G1119900 Malus domestica HOM05D000970 ORTHO05D000788 2.1e-06 55.8 61 47.5
Nitab4.5_0000008g0350 Nicotiana tabacum HOM05D000970 ORTHO05D000788 2.1e-06 55.8 63 50.8
CANSAT56G2775 Cannabis sativa HOM05D000970 ORTHO05D000788 2.7e-06 55.5 67 47.8
MBI14_g31255_MAGBIO Magnolia biondii HOM05D000970 ORTHO05D000788 2.7e-06 55.5 53 52.8
Potri.010G211900 Populus trichocarpa HOM05D000970 ORTHO05D000788 2.7e-06 55.5 63 50.8
Sabra10G0164100 Salix brachista HOM05D000970 ORTHO05D000788 2.7e-06 55.5 61 52.5
Eucgr.J01166 Eucalyptus grandis HOM05D000970 ORTHO05D000788 3.6e-06 55.1 61 45.9
Nitab4.5_0004055g0010 Nicotiana tabacum HOM05D000970 ORTHO05D000788 3.6e-06 55.1 65 49.2
Ciclev10029904m.g Citrus clementina HOM05D000970 ORTHO05D000788 4.7e-06 54.7 56 51.8
FAN01G1355 Fragaria x ananassa HOM05D000970 ORTHO05D000788 4.7e-06 54.7 57 50.9
Glyma.08G258300 Glycine max HOM05D000970 ORTHO05D000788 4.7e-06 54.7 65 44.6
PGSC0003DMG400030182 Solanum tuberosum HOM05D000970 ORTHO05D000788 4.7e-06 54.7 62 48.4
CAN.G1339.3 Capsicum annuum HOM05D000970 ORTHO05D000788 6.1e-06 54.3 64 51.6
CAN.G1557.9 Capsicum annuum HOM05D000970 ORTHO05D000788 6.1e-06 54.3 64 48.4
Glyma.18G282600 Glycine max HOM05D000970 ORTHO05D000788 6.1e-06 54.3 66 45.5
Nitab4.5_0000426g0120 Nicotiana tabacum HOM05D000970 ORTHO05D000788 6.1e-06 54.3 64 50.0
Solyc04g010270.1 Solanum lycopersicum HOM05D000970 ORTHO05D000788 6.1e-06 54.3 62 48.4
Sopen04g005460 Solanum pennellii HOM05D000970 ORTHO05D000788 6.1e-06 54.3 62 48.4
Gohir.A03G037950 Gossypium hirsutum HOM05D000970 ORTHO05D000788 8.0e-06 53.9 47 53.2
Nitab4.5_0012497g0030 Nicotiana tabacum HOM05D000970 ORTHO05D000788 8.0e-06 53.9 62 50.0


User provided reference genes

Program Settings