Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0114400 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.3e-114 416.4 207 100.0
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.4e-39 167.2 203 51.7
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.0e-39 165.6 310 41.3
Rhsim03G0060900 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.0e-38 163.3 205 50.7
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 5.4e-36 155.2 273 42.1
Rhsim01G0150700 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.3e-33 145.6 280 41.4
Rhsim01G0063300 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.5e-17 94.0 192 35.4
Rhsim06G0104000 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.2e-16 90.9 174 37.4
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.1e-16 90.1 175 38.9
RhsimUnG0041700 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.1e-16 90.1 175 38.9
Rhsim02G0157700 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.8e-16 89.7 175 38.3
Rhsim09G0073700 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.8e-16 89.7 74 56.8
RhsimUnG0063700 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.6e-16 89.4 175 38.3
CSS0022173 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.1e-15 87.8 151 41.1
Rhsim09G0076000 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-15 87.4 175 37.7
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.8e-15 87.0 100 47.0
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.8e-15 87.0 100 47.0
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.8e-15 87.0 100 47.0
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.8e-15 87.0 100 47.0
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.8e-15 87.0 175 38.3
CSS0003759 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.4e-15 86.7 151 40.4
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.1e-15 86.3 100 47.0
CSS0045394 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.1e-15 86.3 151 40.4
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.2e-15 85.5 100 46.0
Rhsim11G0003100 Rhododendron simsii HOM05D007798 ORTHO05D009882 8.9e-15 84.7 75 54.7
CSS0038208 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-14 84.3 151 39.1
Rhsim11G0015900 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.5e-14 84.0 181 37.6
vmacro07116 Vaccinium macrocarpon HOM05D001028 ORTHO05D000827 1.5e-14 84.0 57 73.7
Rhsim05G0212100 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.0e-14 83.6 74 51.4
CSS0031004 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.6e-14 83.2 100 47.0
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.6e-14 83.2 100 46.0
Rhsim02G0156600 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.4e-14 82.4 75 54.7
Rhsim05G0057700 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.8e-14 82.0 194 33.5
Rhsim11G0017600 Rhododendron simsii HOM05D007798 ORTHO05D009882 9.9e-14 81.3 103 43.7
Rhsim02G0017800 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.8e-13 79.3 74 51.4
Rhsim11G0007300 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.4e-13 78.6 128 37.5
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 1.4e-12 77.4 134 37.3
Actinidia38754 Actinidia chinensis HOM05D007798 ORTHO05D009882 3.2e-12 76.3 83 42.2
CSS0001174 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-11 74.3 60 56.7
CSS0001345 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-11 74.3 60 56.7
CSS0013307 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-11 74.3 60 56.7
CSS0017826 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-11 74.3 60 56.7
CSS0026447 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-11 74.3 60 56.7
CSS0026772 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-11 74.3 60 56.7
CSS0049921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-11 74.3 60 56.7
CSS0004443 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.6e-11 73.9 60 56.7
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 1.6e-11 73.9 133 36.8
CSS0003769 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.1e-11 73.6 60 56.7
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 2.1e-11 73.6 70 47.1
Rhsim11G0005600 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.5e-11 72.8 50 72.0
CSS0047120 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.6e-11 72.4 60 55.0
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 7.8e-11 71.6 165 32.1
QL93p0053_0646 Quercus lobata HOM05D007798 ORTHO05D009882 1.0e-10 71.2 150 34.0
QL05p075545 Quercus lobata HOM05D007798 ORTHO05D009882 6.6e-10 68.6 112 36.6
CSS0004734 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.7e-08 62.4 47 61.7
Actinidia07485 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.1e-07 61.2 62 43.5
Hma1.2p1_0849F.1_g228030 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 2.4e-07 60.1 72 41.7
CSS0021921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.0e-07 59.3 45 62.2
QL04p082690 Quercus lobata HOM05D007798 ORTHO05D009882 4.0e-07 59.3 64 46.9
CSS0011214 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D009882 1.5e-06 57.4 75 37.3
CSS0032723 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.0e-06 57.0 79 40.5


User provided reference genes

Program Settings