Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0108100 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.7e-307 1057.4 524 100.0
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 3.7e-283 977.6 513 94.7
vmacro15448 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 4.9e-94 349.4 432 45.1
Rhsim08G0211500 Rhododendron simsii HOM05D000045 ORTHO05D000067 5.1e-75 286.2 315 45.7
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.1e-72 276.9 307 45.6
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.9e-72 275.8 365 40.8
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 4.6e-68 263.1 354 41.8
Rhsim04G0174600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.9e-66 257.7 272 46.7
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 4.8e-65 253.1 281 47.0
Rhsim01G0084000 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.2e-49 199.1 269 34.9
Rhsim02G0073600 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.1e-48 195.7 287 33.4
RhsimUnG0063200 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-47 194.9 269 34.2
RhsimUnG0211900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-47 194.9 269 34.2
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.7e-47 192.6 237 38.8
Rhsim06G0146100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-46 191.4 237 38.8
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.8e-46 190.3 285 34.0
Rhsim10G0114400 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.8e-46 190.3 206 46.6
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.0e-46 189.9 285 34.0
Rhsim08G0155200 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.5e-46 189.1 332 35.5
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 8.5e-46 189.1 256 34.8
Dinv02278 Davidia involucrata HOM05D007376 ORTHO05D006265 1.1e-45 188.7 254 35.8
Rhsim12G0081900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.9e-45 188.0 277 33.2
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-44 184.9 322 32.3
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.1e-44 184.5 284 34.9
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.7e-44 184.1 284 34.9
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.6e-44 183.7 284 34.9
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.8e-43 181.4 246 37.4
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.3e-43 181.0 249 36.5
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.3e-41 175.3 290 33.1
vmacro09690 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.3e-41 175.3 347 34.9
Rhsim02G0117900 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.8e-41 173.3 237 35.9
Rhsim05G0021000 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.8e-41 173.3 284 32.7
TWI77G0254 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 6.3e-41 172.9 261 36.4
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.1e-40 172.2 300 33.7
Rhsim02G0220500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-40 172.2 247 37.7
Rhsim05G0036100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-40 172.2 243 38.3
Rhsim12G0031000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.4e-40 171.8 247 37.7
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 3.1e-40 170.6 290 31.0
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 5.3e-40 169.9 290 31.4
RhsimUnG0230900 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.3e-40 169.9 236 38.1
CSS0015660 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.2e-39 168.7 279 28.3
Rhsim05G0207500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.2e-39 168.7 168 47.6
Rhsim03G0047500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-39 168.3 270 35.2
CSS0008720 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.0e-39 167.9 280 29.3
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 7.7e-39 166.0 285 32.6
CSS0005751 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D001590 2.9e-38 164.1 279 27.6
CSS0034250 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 2.9e-38 164.1 246 37.4
Rhsim12G0117400 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.0e-38 163.3 209 38.8
Rhsim12G0033500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-37 162.2 233 37.8
Rhsim08G0151400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-37 161.8 255 32.2
Rhsim13G0135500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.4e-35 155.2 398 30.7
TWI63G0295 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 2.0e-34 151.4 269 31.6
vmacro09226 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 3.4e-34 150.6 214 34.6
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 9.8e-34 149.1 274 31.4
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 2.8e-33 147.5 333 28.8
Rhsim04G0163600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.2e-31 142.1 202 37.1
Rhsim02G0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.3e-30 137.9 285 28.1
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.8e-30 137.1 279 29.4
vmacro00903 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 3.8e-30 137.1 237 31.6
Rhsim04G0158100 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.6e-30 136.3 216 34.7
vmacro19840 Vaccinium macrocarpon HOM05D007376 ORTHO05D018824 8.6e-30 136.0 178 39.3
MD06G1101900 Malus domestica HOM05D001313 ORTHO05D001590 1.9e-29 134.8 277 29.2
CSS0047785 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 9.5e-29 132.5 243 30.9
Rhsim02G0013800 Rhododendron simsii HOM05D007376 ORTHO05D026098 6.1e-28 129.8 273 27.8
Rhsim13G0048400 Rhododendron simsii HOM05D007376 ORTHO05D026098 6.1e-28 129.8 273 27.8
RhsimUnG0155300 Rhododendron simsii HOM05D007376 ORTHO05D026098 6.1e-28 129.8 273 27.8
Dinv17528 Davidia involucrata HOM05D007376 ORTHO05D001590 8.0e-28 129.4 183 35.0
MD06G1101600 Malus domestica HOM05D001313 ORTHO05D001590 1.4e-27 128.6 327 25.4
Prupe.5G115000 Prunus persica HOM05D001313 ORTHO05D001590 1.8e-27 128.3 242 31.0
RcHm_v2.0_Chr7g0195461 Rosa chinensis HOM05D001313 ORTHO05D001590 2.3e-27 127.9 300 29.0
FAN08G0328 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.2e-26 125.6 298 27.2
CSS0048369 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.4e-26 124.0 255 29.8
FAN18G2114 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.4e-26 124.0 302 27.5
FvH4_5g04060 Fragaria vesca HOM05D001313 ORTHO05D001590 5.7e-26 123.2 298 27.5
Rhsim01G0025600 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.7e-26 123.2 168 38.7
FAN18G3588 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.3e-25 122.1 293 28.0
vmacro00666 Vaccinium macrocarpon HOM05D007376 ORTHO05D026098 4.9e-25 120.2 367 24.0
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.4e-24 118.6 279 24.4
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.8e-24 118.2 279 24.4
Rhsim02G0108800 Rhododendron simsii HOM05D017361 ORTHO05D001590 2.4e-24 117.9 217 30.0
RhsimUnG0042500 Rhododendron simsii HOM05D007376 ORTHO05D010137 3.1e-24 117.5 137 39.4
MD10G1135600 Malus domestica HOM05D001313 ORTHO05D001590 4.1e-24 117.1 221 28.5
vmacro00448 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 7.0e-24 116.3 251 30.7
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.0e-23 114.8 277 23.5
FAN16G1555 Fragaria x ananassa HOM05D011367 ORTHO05D001590 2.7e-23 114.4 258 27.9
FAN16G3252 Fragaria x ananassa HOM05D011367 ORTHO05D001590 2.7e-23 114.4 258 27.9
FAN06G5077 Fragaria x ananassa HOM05D011367 ORTHO05D001590 3.5e-23 114.0 258 28.7
vmacro00568 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 4.5e-23 113.6 299 27.4
RcHm_v2.0_Chr3g0457901 Rosa chinensis HOM05D028871 ORTHO05D001590 1.3e-22 112.1 238 27.7
MD06G1101700 Malus domestica HOM05D001313 ORTHO05D001590 2.3e-22 111.3 231 32.5
FvH4_5g07921 Fragaria vesca HOM05D011367 ORTHO05D001590 5.0e-22 110.2 253 28.5
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.1e-21 109.0 167 34.1
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.1e-21 109.0 167 34.1
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.1e-21 109.0 167 34.1
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.1e-21 109.0 167 34.1
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.1e-21 109.0 167 34.1
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.1e-21 109.0 167 34.1
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.1e-21 109.0 167 34.1
Rhsim02G0182500 Rhododendron simsii HOM05D007376 ORTHO05D026098 1.9e-21 108.2 223 29.6
CSS0003651 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.3e-21 107.5 171 33.3
CSS0018623 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.3e-21 107.5 139 37.4
CSS0048517 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 7.3e-21 106.3 307 24.8
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.2e-20 105.5 167 33.5
Rhsim05G0207800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.2e-20 105.5 120 42.5
CSS0005845 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 6.1e-20 103.2 176 26.1
CSS0020562 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 6.1e-20 103.2 135 36.3
MD05G1170800 Malus domestica HOM05D023633 ORTHO05D001590 8.0e-20 102.8 321 25.5
CSS0013522 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.8e-19 101.7 173 32.9
MD10G1053600 Malus domestica HOM05D023633 ORTHO05D001590 3.0e-19 100.9 243 28.4
CSS0047844 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 5.2e-19 100.1 139 36.7
Rhsim08G0172300 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.8e-19 99.8 153 35.3
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.2e-18 99.0 165 32.1
Rhsim09G0046000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.2e-18 99.0 244 29.9
FAN04G0718 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.6e-18 97.8 302 25.2
CSS0037922 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 4.4e-18 97.1 155 32.3
RhsimUnG0169600 Rhododendron simsii HOM05D017361 ORTHO05D001590 1.3e-17 95.5 237 25.7
Sabra05G0039100 Salix brachista HOM05D007376 ORTHO05D001969 1.7e-17 95.1 230 27.8
vmacro15977 Vaccinium macrocarpon HOM05D006123 ORTHO05D007578 1.7e-17 95.1 182 33.0
Rhsim03G0174200 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.2e-17 94.7 97 47.4
MD05G1071400 Malus domestica HOM05D001313 ORTHO05D001590 2.4e-16 91.3 257 25.7
CSS0022404 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 9.2e-16 89.4 135 32.6
RhsimUnG0093700 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.5e-15 87.4 93 43.0
RhsimUnG0084500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-13 82.4 107 40.2
TWI14G1239 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 1.5e-13 82.0 91 39.6
TWI23G0081 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 1.5e-13 82.0 91 39.6
FAN27G1165 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.9e-13 81.6 189 27.5
Rhsim07G0128100 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.3e-13 79.7 118 39.8
FAN18G1449 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.7e-12 77.0 232 26.3
FvH4_2g15701 Fragaria vesca HOM05D001313 ORTHO05D008319 1.1e-11 75.9 205 25.4
vmacro05246 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.3e-11 74.7 207 24.2
RhsimUnG0016200 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.0e-11 73.9 101 29.7
MBI01_g19130_MAGBIO Magnolia biondii HOM05D029362 ORTHO05D022891 8.9e-11 72.8 201 24.9
FAN05G1235 Fragaria x ananassa HOM05D011367 ORTHO05D001590 3.4e-10 70.9 164 26.2
FvH4_6g20108 Fragaria vesca HOM05D023564 ORTHO05D001590 4.4e-10 70.5 193 24.4
FvH4_7g07291 Fragaria vesca HOM05D016428 ORTHO05D017916 8.3e-09 66.2 176 26.7
PSO210G2316 Papaver somniferum HOM05D008588 ORTHO05D010137 8.3e-09 66.2 150 30.7
FvH4_6g39110 Fragaria vesca HOM05D003258 ORTHO05D010103 1.1e-08 65.9 248 25.4
FvH4_3g06730 Fragaria vesca HOM05D003258 ORTHO05D010103 1.4e-08 65.5 248 25.4
PSO675G7395 Papaver somniferum HOM05D008588 ORTHO05D010137 1.4e-08 65.5 134 31.3
CSS0042257 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D018824 1.9e-08 65.1 115 32.2
PSO063G2004 Papaver somniferum HOM05D008588 ORTHO05D010137 1.9e-08 65.1 116 33.6
PSO063G6468 Papaver somniferum HOM05D008588 ORTHO05D010137 2.4e-08 64.7 164 28.0
CSS0001173 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.2e-08 64.3 79 36.7
FvH4_4g09880 Fragaria vesca HOM05D003258 ORTHO05D010103 3.2e-08 64.3 247 25.5
Actinidia08651 Actinidia chinensis HOM05D001081 ORTHO05D004708 4.1e-08 63.9 67 38.8
Actinidia09092 Actinidia chinensis HOM05D026250 ORTHO05D026319 4.1e-08 63.9 89 34.8
CSS0042152 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.1e-08 63.9 102 30.4
FAN26G1492 Fragaria x ananassa HOM05D003258 ORTHO05D010103 7.0e-08 63.2 237 24.5
PSO541G0958 Papaver somniferum HOM05D008588 ORTHO05D010137 9.2e-08 62.8 149 30.2
CSS0041926 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D018824 1.2e-07 62.4 115 33.0
Actinidia12982 Actinidia chinensis HOM05D007376 ORTHO05D001590 1.6e-07 62.0 78 41.0
Rhsim01G0158100 Rhododendron simsii HOM05D017361 ORTHO05D001590 2.1e-07 61.6 79 41.8
Rhsim09G0109800 Rhododendron simsii HOM05D007651 ORTHO05D000898 4.6e-07 60.5 214 23.8
FAN05G3237 Fragaria x ananassa HOM05D003258 ORTHO05D010103 6.0e-07 60.1 237 24.5
PSO104G0253 Papaver somniferum HOM05D009650 ORTHO05D011166 7.8e-07 59.7 128 28.1
vmacro05225 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.0e-06 59.3 60 45.0
Rhsim02G0102000 Rhododendron simsii HOM05D002347 ORTHO05D000898 2.3e-06 58.2 217 24.4
FAN20G1692 Fragaria x ananassa HOM05D003258 ORTHO05D010103 3.0e-06 57.8 231 22.1
FAN09G0027 Fragaria x ananassa HOM05D003258 ORTHO05D010103 5.1e-06 57.0 223 24.2
FAN23G2739 Fragaria x ananassa HOM05D003258 ORTHO05D010103 8.6e-06 56.2 293 21.2


User provided reference genes

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