Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0105800 Rhododendron simsii HOM05D008140 ORTHO05D009650 1.5e-59 232.6 115 100.0
Nitab4.5_0012334g0020 Nicotiana tabacum HOM05D009634 ORTHO05D009650 1.5e-19 99.8 95 52.6
Nitab4.5_0002878g0060 Nicotiana tabacum HOM05D009634 ORTHO05D009650 1.4e-17 93.2 95 50.5
Peaxi162Scf00244g00075 Petunia axillaris HOM05D009634 ORTHO05D009650 9.0e-17 90.5 114 46.5
Cfa011233 Carpinus fangiana HOM05D008140 ORTHO05D009650 2.6e-16 89.0 108 50.0
Prupe.2G086100 Prunus persica HOM05D008140 ORTHO05D009650 1.7e-15 86.3 118 48.3
RcHm_v2.0_Chr1g0333151 Rosa chinensis HOM05D008140 ORTHO05D009650 1.7e-15 86.3 109 47.7
Thecc.10G110900 Theobroma cacao HOM05D008140 ORTHO05D009650 3.8e-15 85.1 102 46.1
MD07G1068400 Malus domestica HOM05D008140 ORTHO05D009650 6.5e-15 84.3 108 51.9
RcHm_v2.0_Chr1g0333141 Rosa chinensis HOM05D008140 ORTHO05D009650 6.5e-15 84.3 109 46.8
Oeu026565.1 Olea europaea HOM05D009634 ORTHO05D009650 1.1e-14 83.6 114 46.5
SGA_v2.0_scaffold13G06494 Striga asiatica HOM05D009634 ORTHO05D009650 2.5e-14 82.4 113 42.5
Duzib106G0172 Durio zibethinus HOM05D008140 ORTHO05D009650 3.2e-14 82.0 99 47.5
Sabra10G0182500 Salix brachista HOM05D008140 ORTHO05D009650 3.2e-14 82.0 110 46.4
TAR636G0417 Trochodendron aralioides HOM05D008140 ORTHO05D009650 3.2e-14 82.0 117 45.3
CiPaw.13G036800 Carya illinoinensis HOM05D008140 ORTHO05D009650 4.2e-14 81.6 102 50.0
Nitab4.5_0001850g0010 Nicotiana tabacum HOM05D009634 ORTHO05D009650 1.2e-13 80.1 108 46.3
QL04p041477 Quercus lobata HOM05D008140 ORTHO05D009650 1.2e-13 80.1 103 46.6
Nitab4.5_0002878g0050 Nicotiana tabacum HOM05D009634 ORTHO05D009650 2.1e-13 79.3 99 44.4
Cfa011234 Carpinus fangiana HOM05D008140 ORTHO05D009650 2.7e-13 79.0 108 48.1
Nitab4.5_0002878g0010 Nicotiana tabacum HOM05D009634 ORTHO05D009650 3.6e-13 78.6 105 46.7
Ciclev10033301m.g Citrus clementina HOM05D008140 ORTHO05D009650 4.6e-13 78.2 106 42.5
Potri.008G025100 Populus trichocarpa HOM05D008140 ORTHO05D009650 4.6e-13 78.2 111 44.1
COL.COLO4_06812 Corchorus olitorius HOM05D008140 ORTHO05D009650 6.1e-13 77.8 118 43.2
Peaxi162Scf00244g00074 Petunia axillaris HOM05D009634 ORTHO05D009650 7.9e-13 77.4 107 45.8
Potri.008G025200 Populus trichocarpa HOM05D008140 ORTHO05D009650 7.9e-13 77.4 111 43.2
Potri.010G235400 Populus trichocarpa HOM05D008140 ORTHO05D009650 1.0e-12 77.0 108 44.4
Oeu059859.1 Olea europaea HOM05D009634 ORTHO05D009650 2.3e-12 75.9 114 42.1
SalBow6G2478 Salvia bowleyana HOM05D009634 ORTHO05D009650 2.3e-12 75.9 113 40.7
QL04p042101 Quercus lobata HOM05D008140 ORTHO05D009650 3.0e-12 75.5 108 42.6
Haze_02596 Corylus avellana HOM05D008140 ORTHO05D009650 6.7e-12 74.3 105 44.8
SalBow6G5252 Salvia bowleyana HOM05D009634 ORTHO05D009650 6.7e-12 74.3 111 41.4
CiPaw.13G036700 Carya illinoinensis HOM05D008140 ORTHO05D009650 2.5e-11 72.4 107 43.9
FvH4_7g05940 Fragaria vesca HOM05D008140 ORTHO05D009650 2.5e-11 72.4 104 44.2
FAN06G2722 Fragaria x ananassa HOM05D008140 ORTHO05D009650 2.5e-11 72.4 104 44.2
FAN01G1993 Fragaria x ananassa HOM05D008140 ORTHO05D009650 3.3e-11 72.0 99 45.5
Sopen11g003360 Solanum pennellii HOM05D009634 ORTHO05D009650 3.3e-11 72.0 114 39.5
FAN03G1479 Fragaria x ananassa HOM05D008140 ORTHO05D009650 4.3e-11 71.6 104 43.3
FAN10G4346 Fragaria x ananassa HOM05D008140 ORTHO05D009650 4.3e-11 71.6 104 44.2
Solyc11g007520.1 Solanum lycopersicum HOM05D009634 ORTHO05D009650 5.7e-11 71.2 114 39.5
Manes.07G090200 Manihot esculenta HOM05D008140 ORTHO05D009650 9.7e-11 70.5 113 41.6
SalBow6G4194 Salvia bowleyana HOM05D009634 ORTHO05D009650 9.7e-11 70.5 97 44.3
PGSC0003DMG400027311 Solanum tuberosum HOM05D009634 ORTHO05D009650 9.7e-11 70.5 101 43.6
QL04p041480 Quercus lobata HOM05D008140 ORTHO05D009650 3.7e-10 68.6 104 43.3
Cfa011231 Carpinus fangiana HOM05D008140 ORTHO05D009650 6.3e-10 67.8 119 37.8
Migut.F00890 Erythranthe guttata HOM05D009634 ORTHO05D009650 1.1e-09 67.0 100 44.0
Haze_02595 Corylus avellana HOM05D008140 ORTHO05D009650 1.4e-09 66.6 100 45.0
Cfa011235 Carpinus fangiana HOM05D008140 ORTHO05D009650 1.8e-09 66.2 110 43.6
Haze_02597 Corylus avellana HOM05D008140 ORTHO05D009650 2.4e-09 65.9 118 38.1
Migut.F00892 Erythranthe guttata HOM05D009634 ORTHO05D009650 5.3e-09 64.7 100 40.0
PGSC0003DMG400027312 Solanum tuberosum HOM05D009634 ORTHO05D009650 6.9e-09 64.3 99 39.4
AT2G38790 Arabidopsis thaliana HOM05D008140 ORTHO05D009650 1.5e-08 63.2 106 39.6
Lalb_Chr06g0170171 Lupinus albus HOM05D008140 ORTHO05D009650 1.5e-08 63.2 97 39.2
Sp4g21180 Schrenkiella parvula HOM05D008140 ORTHO05D009650 1.5e-08 63.2 107 38.3
CAN.G135.81 Capsicum annuum HOM05D009634 ORTHO05D009650 7.7e-08 60.8 101 37.6
Cpa.g.sc19.24 Carica papaya HOM05D008140 ORTHO05D009650 7.7e-08 60.8 103 38.8
Sabra08G0016900 Salix brachista HOM05D008140 ORTHO05D009650 7.7e-08 60.8 109 38.5
QL04p041665 Quercus lobata HOM05D008140 ORTHO05D009650 1.7e-07 59.7 96 43.8
A03p21600 Brassica napus HOM05D008140 ORTHO05D009650 2.9e-07 58.9 110 35.5
BolC4t22473H Brassica oleracea HOM05D008140 ORTHO05D009650 2.9e-07 58.9 101 37.6
BraA03t11396Z Brassica rapa HOM05D008140 ORTHO05D009650 2.9e-07 58.9 110 35.5
THA.LOC104803183 Tarenaya hassleriana HOM05D008140 ORTHO05D009650 3.8e-07 58.5 107 40.2
AL4G36090 Arabidopsis lyrata HOM05D008140 ORTHO05D009650 5.0e-07 58.2 107 33.6
C04p08800 Brassica napus HOM05D008140 ORTHO05D009650 5.0e-07 58.2 99 37.4
C03p25590 Brassica napus HOM05D008140 ORTHO05D009650 6.5e-07 57.8 102 37.3
BolC3t14947H Brassica oleracea HOM05D008140 ORTHO05D009650 6.5e-07 57.8 102 37.3
CARHR133500 Cardamine hirsuta HOM05D008140 ORTHO05D009650 6.5e-07 57.8 103 36.9
BcaC02g12023 Brassica carinata HOM05D008140 ORTHO05D009650 1.4e-06 56.6 99 36.4
Carub.0004s2081 Capsella rubella HOM05D008140 ORTHO05D009650 1.4e-06 56.6 102 36.3
CiPaw.13G036900 Carya illinoinensis HOM05D008140 ORTHO05D009650 1.4e-06 56.6 116 36.2
BcaB02g09155 Brassica carinata HOM05D008140 ORTHO05D009650 3.2e-06 55.5 99 35.4
BcaB02g09156 Brassica carinata HOM05D008140 ORTHO05D009650 3.2e-06 55.5 99 35.4
Migut.F00891 Erythranthe guttata HOM05D009634 ORTHO05D009650 4.2e-06 55.1 105 37.1
A05p07360 Brassica napus HOM05D008140 ORTHO05D009650 5.5e-06 54.7 99 35.4
BraA05t19701Z Brassica rapa HOM05D008140 ORTHO05D009650 5.5e-06 54.7 99 35.4
A05p07380 Brassica napus HOM05D008140 ORTHO05D009650 7.2e-06 54.3 99 34.3
BraA05t19703Z Brassica rapa HOM05D008140 ORTHO05D009650 7.2e-06 54.3 99 34.3


User provided reference genes

Program Settings