Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0092100 Rhododendron simsii HOM05D006544 ORTHO05D008757 1.6e-163 579.3 281 100.0
vmacro07290 Vaccinium macrocarpon HOM05D006544 ORTHO05D008757 8.8e-74 281.2 236 64.0
Sabra16G0097900 Salix brachista HOM05D006544 ORTHO05D008757 4.8e-72 275.4 250 60.4
Dinv37314 Davidia involucrata HOM05D006544 ORTHO05D008757 5.4e-71 271.9 237 61.2
HanXRQChr13g0401051 Helianthus annuus HOM05D006544 ORTHO05D008757 5.4e-71 271.9 237 60.8
Actinidia28904 Actinidia chinensis HOM05D006544 ORTHO05D008757 1.2e-70 270.8 237 60.8
Gorai.006G164200 Gossypium raimondii HOM05D006544 ORTHO05D008757 2.7e-70 269.6 237 60.3
Gohir.A09G147100 Gossypium hirsutum HOM05D006544 ORTHO05D008757 7.7e-70 268.1 237 60.3
THA.LOC104816347 Tarenaya hassleriana HOM05D006544 ORTHO05D008757 1.7e-69 266.9 237 58.2
Thecc.05G065700 Theobroma cacao HOM05D006544 ORTHO05D008757 2.3e-69 266.5 237 59.9
Lalb_Chr06g0171711 Lupinus albus HOM05D006544 ORTHO05D008757 2.9e-69 266.2 237 59.9
CAN.G1169.17 Capsicum annuum HOM05D006544 ORTHO05D008757 3.8e-69 265.8 237 60.3
CiPaw.09G172700 Carya illinoinensis HOM05D006544 ORTHO05D008757 3.8e-69 265.8 234 60.3
ECA233G4064 Erigeron canadensis HOM05D006544 ORTHO05D008757 3.8e-69 265.8 234 59.8
Gohir.D09G142700 Gossypium hirsutum HOM05D006544 ORTHO05D008757 3.8e-69 265.8 237 59.5
PGSC0003DMG400010472 Solanum tuberosum HOM05D006544 ORTHO05D008757 5.0e-69 265.4 237 59.9
Duzib093G0756 Durio zibethinus HOM05D006544 ORTHO05D008757 6.5e-69 265.0 237 59.9
Solyc10g084040.2 Solanum lycopersicum HOM05D006544 ORTHO05D008757 6.5e-69 265.0 237 60.3
Sopen10g033470 Solanum pennellii HOM05D006544 ORTHO05D008757 6.5e-69 265.0 237 60.3
QL07p043583 Quercus lobata HOM05D006544 ORTHO05D008757 8.6e-69 264.6 236 60.6
Aa31LG1G21780 Aethionema arabicum HOM05D006544 ORTHO05D008757 1.1e-68 264.2 237 59.5
TWI74G1602 Tripterygium wilfordii HOM05D006544 ORTHO05D008757 2.5e-68 263.1 237 59.1
Eucgr.A01683 Eucalyptus grandis HOM05D006544 ORTHO05D008757 3.2e-68 262.7 233 60.1
Lsat_1_v5_gn_6_25121 Lactuca sativa HOM05D006544 ORTHO05D008757 3.2e-68 262.7 235 58.3
Nitab4.5_0010279g0020 Nicotiana tabacum HOM05D006544 ORTHO05D008757 3.2e-68 262.7 236 60.2
Oeu016983.1 Olea europaea HOM05D006544 ORTHO05D008757 3.2e-68 262.7 255 57.3
Potri.016G092300 Populus trichocarpa HOM05D006544 ORTHO05D008757 3.2e-68 262.7 237 59.1
ClCG04G009280 Citrullus lanatus HOM05D006544 ORTHO05D008757 5.5e-68 261.9 235 59.6
Ciclev10012670m.g Citrus clementina HOM05D006544 ORTHO05D008757 5.5e-68 261.9 237 59.1
Manes.09G066600 Manihot esculenta HOM05D006544 ORTHO05D008757 5.5e-68 261.9 237 59.1
GSVIVG01025731001 Vitis vinifera HOM05D006544 ORTHO05D008757 5.5e-68 261.9 237 59.9
SGA_v2.0_scaffold224G42946 Striga asiatica HOM05D006544 ORTHO05D008757 7.2e-68 261.5 237 58.6
Nitab4.5_0000063g0030 Nicotiana tabacum HOM05D006544 ORTHO05D008757 9.5e-68 261.2 237 59.9
Thhalv10014610m.g Eutrema salsugineum HOM05D006544 ORTHO05D008757 1.2e-67 260.8 237 58.2
TAR636G3123 Trochodendron aralioides HOM05D006544 ORTHO05D008757 1.2e-67 260.8 237 59.1
CsaV3_6G039870 Cucumis sativus L. HOM05D006544 ORTHO05D008757 1.6e-67 260.4 237 58.6
Lj2A122G33 Lonicera japonica HOM05D006544 ORTHO05D008757 1.6e-67 260.4 248 56.9
Sed0018427 Sechium edule HOM05D006544 ORTHO05D008757 1.6e-67 260.4 237 59.1
Migut.L01701 Erythranthe guttata HOM05D006544 ORTHO05D008757 8.0e-67 258.1 237 57.4
MELO3C024463.2 Cucumis melo HOM05D006544 ORTHO05D008757 1.0e-66 257.7 235 57.9
AL8G27480 Arabidopsis lyrata HOM05D006544 ORTHO05D008757 1.4e-66 257.3 237 57.8
Cc06_g04210 Coffea canephora HOM05D006544 ORTHO05D008757 1.4e-66 257.3 237 57.8
Cfa017605 Carpinus fangiana HOM05D006544 ORTHO05D008757 1.8e-66 256.9 234 58.5
Nn2g11585 Nelumbo nucifera HOM05D006544 ORTHO05D008757 2.3e-66 256.5 237 57.8
AT5G52970 Arabidopsis thaliana HOM05D006544 ORTHO05D008757 3.0e-66 256.1 237 57.4
arahy.Tifrunner.gnm1.ann1.4P9CL0 Arachis hypogaea HOM05D006544 ORTHO05D008757 3.0e-66 256.1 235 58.3
arahy.Tifrunner.gnm1.ann1.8Z8BZM Arachis hypogaea HOM05D006544 ORTHO05D008757 3.0e-66 256.1 235 58.3
DCAR_020819 Daucus carota HOM05D006544 ORTHO05D008757 4.0e-66 255.8 237 57.0
Phvul.007G219800 Phaseolus vulgaris HOM05D006544 ORTHO05D008757 4.0e-66 255.8 236 58.5
Lj5g0006333 Lotus japonicus HOM05D006544 ORTHO05D008757 5.2e-66 255.4 238 58.4
Sp6g39380 Schrenkiella parvula HOM05D006544 ORTHO05D008757 5.2e-66 255.4 237 57.4
RcHm_v2.0_Chr3g0470171 Rosa chinensis HOM05D006544 ORTHO05D008757 8.9e-66 254.6 237 58.2
Glyma.10G056700 Glycine max HOM05D006544 ORTHO05D008757 1.5e-65 253.8 238 58.4
Sc02g0001640 Simmondsia chinensis HOM05D006544 ORTHO05D008757 2.0e-65 253.4 236 57.2
BcaB05g21832 Brassica carinata HOM05D006544 ORTHO05D008757 2.6e-65 253.1 236 57.6
Carub.0008s1316 Capsella rubella HOM05D006544 ORTHO05D008757 2.6e-65 253.1 237 56.5
Medtr1g063350 Medicago truncatula HOM05D006544 ORTHO05D008757 3.4e-65 252.7 233 57.9
CANSAT80G1747 Cannabis sativa HOM05D006544 ORTHO05D008757 4.4e-65 252.3 235 57.0
MBI18_g04983_MAGBIO Magnolia biondii HOM05D006544 ORTHO05D008757 4.4e-65 252.3 235 56.6
BcaC03g13011 Brassica carinata HOM05D006544 ORTHO05D008757 5.7e-65 251.9 236 57.6
BraA02t04758Z Brassica rapa HOM05D006544 ORTHO05D008757 5.7e-65 251.9 236 57.6
MD12G1113500 Malus domestica HOM05D006544 ORTHO05D008757 5.7e-65 251.9 237 57.0
Aqoxy2G01774 Aquilegia oxysepala HOM05D006544 ORTHO05D008757 9.8e-65 251.1 235 57.9
FvH4_6g16320 Fragaria vesca HOM05D006544 ORTHO05D008757 1.3e-64 250.8 237 57.0
CARHR265950 Cardamine hirsuta HOM05D006544 ORTHO05D008757 2.8e-64 249.6 235 56.6
COL.COLO4_26969 Corchorus olitorius HOM05D006544 ORTHO05D008757 6.3e-64 248.4 260 53.8
FAN05G5519 Fragaria x ananassa HOM05D006544 ORTHO05D008757 6.3e-64 248.4 236 57.2
PGR004G0128 Punica granatum HOM05D006544 ORTHO05D008757 8.3e-64 248.1 238 56.7
TPR.G11258 Trifolium pratense HOM05D006544 ORTHO05D008757 8.3e-64 248.1 238 56.7
Peaxi162Scf00311g00059 Petunia axillaris HOM05D006544 ORTHO05D008757 1.1e-63 247.7 263 53.2
C02p01030 Brassica napus HOM05D006544 ORTHO05D008757 1.4e-63 247.3 237 57.4
BolC2t06093H Brassica oleracea HOM05D006544 ORTHO05D008757 1.4e-63 247.3 237 57.4
AUR62040358 Chenopodium quinoa HOM05D006544 ORTHO05D008757 1.4e-63 247.3 237 56.1
Psat6g072960 Pisum sativum HOM05D006544 ORTHO05D008757 2.4e-63 246.5 238 55.9
Ah.15g092510 Amaranthus hybridus HOM05D006544 ORTHO05D008757 3.1e-63 246.1 245 55.1
FAN09G3810 Fragaria x ananassa HOM05D006544 ORTHO05D008757 3.1e-63 246.1 233 57.1
Ca_11495_v3 Cicer arietinum L. HOM05D006544 ORTHO05D008757 4.1e-63 245.7 238 56.3
FAN14G3080 Fragaria x ananassa HOM05D006544 ORTHO05D008757 4.1e-63 245.7 233 56.7
PSO339G0933 Papaver somniferum HOM05D006544 ORTHO05D008757 5.4e-63 245.4 238 56.3
SalBow5G2848 Salvia bowleyana HOM05D006544 ORTHO05D008757 5.4e-63 245.4 234 54.3
VMungo0720G1694 Vigna mungo HOM05D006544 ORTHO05D008757 5.4e-63 245.4 235 56.6
PSO801G0526 Papaver somniferum HOM05D006544 ORTHO05D008757 7.0e-63 245.0 238 56.3
EL10Ac7g16625 Beta vulgaris HOM05D006544 ORTHO05D008757 1.6e-62 243.8 238 55.9
MSTRG.10320 Avicennia marina HOM05D006544 ORTHO05D008757 1.3e-61 240.7 235 53.6
ATR1093G019 Amborella trichopoda HOM05D006544 ORTHO05D008757 1.7e-61 240.4 237 52.7
AUR62042496 Chenopodium quinoa HOM05D006544 ORTHO05D008757 1.7e-61 240.4 246 54.1
Zm00001eb088350 Zea mays HOM05D006544 ORTHO05D008757 2.9e-61 239.6 234 53.4
HPP92_009890 Vanilla planifolia HOM05D006544 ORTHO05D008757 3.8e-61 239.2 231 55.8
unitig_578.g16041 Utricularia gibba HOM05D006544 ORTHO05D008757 5.6e-60 235.3 237 51.9
CDE09G0170 Ceratophyllum demersum HOM05D006544 ORTHO05D008757 6.1e-59 231.9 237 50.6
Cpa.g.sc54.75 Carica papaya HOM05D006544 ORTHO05D008757 4.0e-58 229.2 119 88.2
SEGI_38453 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 2.6e-57 226.5 237 50.6
SEGI_20985 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 1.0e-53 214.5 121 79.3
Prupe.6G232400 Prunus persica HOM05D006544 ORTHO05D008757 4.3e-52 209.1 210 54.8
SMO118G0079 Selaginella moellendorffii HOM05D006544 ORTHO05D008757 4.3e-52 209.1 228 48.7
Pp3c13_11800 Physcomitrium patens HOM05D006544 ORTHO05D008757 9.5e-52 208.0 239 47.7
Mapoly0064s0090 Marchantia polymorpha HOM05D006544 ORTHO05D008757 1.6e-51 207.2 228 47.8
AagrBONN_evm.TU.Sc2ySwM_344.816 Anthoceros agrestis HOM05D006544 ORTHO05D008757 6.8e-50 201.8 121 75.2
AagrBONN_evm.TU.Sc2ySwM_228.4577 Anthoceros agrestis HOM05D006544 ORTHO05D008757 4.6e-46 189.1 219 48.4
CBR_g11899 Chara braunii HOM05D006544 ORTHO05D008757 3.0e-45 186.4 119 68.1
Cre15.g636050 Chlamydomonas reinhardtii HOM05D006544 ORTHO05D008757 3.9e-45 186.0 120 69.2
Cpa.g.sc4277.1 Carica papaya HOM05D006544 ORTHO05D008757 1.4e-42 177.6 116 75.9
Cpa.g.sc54.73 Carica papaya HOM05D006544 ORTHO05D008757 1.4e-42 177.6 116 75.9
Lj5g0024591 Lotus japonicus HOM05D006544 ORTHO05D008757 6.8e-42 175.3 96 83.3
MCO09G250 Micromonas commoda HOM05D006544 ORTHO05D008757 1.2e-41 174.5 118 64.4
Os07g0534000 Oryza sativa ssp. japonica HOM05D006544 ORTHO05D008757 3.4e-41 172.9 94 81.9
PRCOL_00002491 Prasinoderma coloniale HOM05D006544 ORTHO05D008757 5.8e-41 172.2 118 65.3
CSS0000889 Camellia sinensis var. sinensis HOM05D006544 ORTHO05D008757 6.4e-32 142.1 183 45.4
HPP92_009894 Vanilla planifolia HOM05D006544 ORTHO05D008757 5.8e-25 119.0 65 84.6
Rhsim08G0031600 Rhododendron simsii HOM05D003128 ORTHO05D004333 4.8e-19 99.4 79 63.3
AagrBONN_evm.TU.Sc2ySwM_368.258 Anthoceros agrestis HOM05D006544 ORTHO05D021234 2.2e-16 90.5 108 37.0
CBR_g20266 Chara braunii HOM05D006544 ORTHO05D021234 2.2e-16 90.5 111 38.7
Medtr5g037320 Medicago truncatula HOM05D006544 ORTHO05D008757 4.2e-15 86.3 149 38.9
SalBow5G0971 Salvia bowleyana HOM05D008540 ORTHO05D009454 2.1e-14 84.0 48 77.1
Hund20313 Selenicereus undatus HOM05D006544 ORTHO05D008757 6.0e-14 82.4 159 36.5
SEGI_36386 Sequoiadendron giganteum HOM05D006544 ORTHO05D021234 2.1e-11 73.9 114 30.7
Cpa.g.sc54.74 Carica papaya HOM05D006544 ORTHO05D008757 8.4e-08 62.0 45 68.9
HPP92_009893 Vanilla planifolia HOM05D006544 ORTHO05D008757 8.4e-08 62.0 30 96.7
Cre03.g154600 Chlamydomonas reinhardtii HOM05D006544 ORTHO05D021234 1.9e-07 60.8 114 27.2
Nn2g13777 Nelumbo nucifera HOM05D006544 ORTHO05D008757 9.3e-07 58.5 153 32.0


User provided reference genes

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