Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 5.4e-110 401.0 198 100.0
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 1.3e-82 310.1 198 81.3
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 2.5e-67 259.2 201 71.1
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 2.5e-67 259.2 201 71.1
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 2.0e-64 249.6 201 69.2
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 8.7e-60 234.2 201 65.2
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 1.4e-57 226.9 202 63.9
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 1.8e-57 226.5 199 64.8
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 2.4e-57 226.1 202 64.4
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 1.7e-55 219.9 207 61.8
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 1.7e-55 219.9 200 64.0
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 2.2e-55 219.5 203 63.5
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 3.8e-55 218.8 203 63.1
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 1.4e-54 216.9 208 63.0
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 2.5e-54 216.1 203 63.1
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 4.2e-54 215.3 200 62.5
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 5.5e-54 214.9 203 57.6
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 7.2e-54 214.5 190 62.6
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 9.3e-54 214.2 199 61.8
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 1.6e-53 213.4 200 61.0
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 2.7e-53 212.6 204 61.8
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 3.5e-53 212.2 201 60.7
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 3.5e-53 212.2 200 62.5
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 4.6e-53 211.8 198 59.6
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 1.0e-52 210.7 203 61.6
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 1.3e-52 210.3 197 60.4
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 1.8e-52 209.9 205 61.0
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 2.3e-52 209.5 198 60.1
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 5.1e-52 208.4 157 70.1
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 5.1e-52 208.4 198 60.1
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 1.1e-51 207.2 201 60.7
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 1.5e-51 206.8 191 60.2
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 3.3e-51 205.7 200 61.0
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 3.3e-51 205.7 188 60.6
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 5.7e-51 204.9 203 58.6
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 9.7e-51 204.1 148 72.3
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 1.3e-50 203.8 193 59.6
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 2.2e-50 203.0 149 73.2
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 1.1e-49 200.7 185 64.3
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 1.1e-49 200.7 130 79.2
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 1.4e-49 200.3 192 60.9
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 5.3e-49 198.4 204 56.9
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 1.2e-48 197.2 145 71.0
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 2.6e-48 196.1 115 86.1
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 3.4e-48 195.7 173 60.1
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 2.9e-47 192.6 204 54.9
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 2.9e-47 192.6 179 62.6
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 5.0e-47 191.8 131 74.0
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 1.1e-46 190.7 199 56.3
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 1.9e-46 189.9 115 83.5
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 2.5e-46 189.5 142 69.7
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 3.2e-46 189.1 196 58.2
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 7.2e-46 188.0 197 57.4
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 2.7e-45 186.0 142 68.3
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 3.6e-45 185.7 199 52.8
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 4.6e-45 185.3 160 63.8
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 7.9e-45 184.5 204 55.9
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 7.9e-45 184.5 199 53.3
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 1.8e-44 183.3 126 71.4
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 1.8e-44 183.3 124 73.4
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 1.8e-44 183.3 141 67.4
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 2.3e-44 183.0 199 54.3
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 3.9e-44 182.2 174 58.6
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 6.7e-44 181.4 145 66.2
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 6.7e-44 181.4 200 53.5
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 6.7e-44 181.4 198 56.1
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 1.1e-43 180.6 126 71.4
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 1.1e-43 180.6 126 71.4
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 1.1e-43 180.6 156 62.2
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 1.1e-43 180.6 126 71.4
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 4.3e-43 178.7 124 73.4
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 1.3e-42 177.2 142 66.9
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 1.7e-42 176.8 142 66.2
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 2.2e-42 176.4 125 69.6
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 2.8e-42 176.0 204 51.5
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 3.7e-42 175.6 126 69.8
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 6.3e-42 174.9 125 69.6
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 6.3e-42 174.9 125 69.6
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 1.1e-41 174.1 209 56.5
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 1.4e-41 173.7 130 67.7
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 2.4e-41 172.9 142 64.8
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 3.1e-41 172.6 204 53.4
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 4.1e-41 172.2 123 70.7
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 2.2e-39 166.4 141 65.2
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 6.5e-39 164.9 134 64.2
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 4.2e-38 162.2 141 66.0
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 5.5e-38 161.8 122 69.7
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 2.1e-37 159.8 136 64.0
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 5.1e-36 155.2 127 64.6
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 1.1e-35 154.1 151 60.9
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 1.1e-35 154.1 151 60.9
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 4.1e-33 145.6 207 46.9
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 8.0e-29 131.3 172 47.7
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 1.0e-28 131.0 134 53.0
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 3.7e-26 122.5 130 51.5
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 2.4e-25 119.8 119 54.6
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 2.0e-24 116.7 380 29.5
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 3.8e-23 112.5 83 66.3
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 9.4e-22 107.8 83 65.1
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 8.0e-21 104.8 97 57.7
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.8e-20 103.6 89 58.4
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 1.5e-19 100.5 81 61.7
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 1.1e-14 84.3 62 71.0
Ciclev10013843m.g Citrus clementina HOM05D007282 ORTHO05D009214 3.1e-09 66.2 111 44.1
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 4.1e-09 65.9 52 69.2
PRCOL_00005178 Prasinoderma coloniale HOM05D007282 ORTHO05D049198 5.6e-06 55.5 105 38.1
Glyma.02G201900 Glycine max HOM05D007282 ORTHO05D009214 9.5e-06 54.7 77 46.8
MD14G1029800 Malus domestica HOM05D007282 ORTHO05D009214 9.5e-06 54.7 75 52.0


User provided reference genes

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