Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0057500 Rhododendron simsii HOM05D007071 ORTHO05D008677 4.4e-147 524.6 268 100.0
Actinidia37784 Actinidia chinensis HOM05D007071 ORTHO05D008677 7.1e-105 384.4 266 75.2
vmacro07528 Vaccinium macrocarpon HOM05D007071 ORTHO05D008677 8.6e-103 377.5 305 70.8
Dinv25088 Davidia involucrata HOM05D007071 ORTHO05D008677 5.3e-84 315.1 265 65.7
GSVIVG01022502001 Vitis vinifera HOM05D007071 ORTHO05D008677 4.0e-76 288.9 275 58.9
Manes.08G038400 Manihot esculenta HOM05D007071 ORTHO05D008677 4.5e-75 285.4 287 55.1
Duzib093G1750 Durio zibethinus HOM05D007071 ORTHO05D008677 2.2e-74 283.1 272 57.4
Gorai.006G146400 Gossypium raimondii HOM05D007071 ORTHO05D008677 4.6e-72 275.4 272 55.1
TWI77G0807 Tripterygium wilfordii HOM05D007071 ORTHO05D008677 4.6e-72 275.4 288 54.9
Nn2g14444 Nelumbo nucifera HOM05D007071 ORTHO05D008677 1.0e-71 274.2 294 53.7
Gohir.D09G127800 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.6e-69 266.9 271 55.7
Gohir.A09G131600 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.8e-69 266.2 272 54.8
Cfa020101 Carpinus fangiana HOM05D007071 ORTHO05D008677 1.2e-67 260.8 286 51.7
PSO339G2219 Papaver somniferum HOM05D007071 ORTHO05D008677 2.6e-67 259.6 288 51.7
Potri.016G064200 Populus trichocarpa HOM05D007071 ORTHO05D008677 5.8e-67 258.5 286 50.3
Aqoxy2G00613 Aquilegia oxysepala HOM05D007071 ORTHO05D008677 6.5e-66 255.0 286 51.4
Atru.chr8.1251 Acer truncatum HOM05D007071 ORTHO05D008677 5.5e-65 251.9 262 53.4
Lsat_1_v5_gn_1_56481 Lactuca sativa HOM05D000137 ORTHO05D000503 1.2e-64 250.8 266 56.0
CANSAT64G1821 Cannabis sativa HOM05D007071 ORTHO05D008677 1.6e-64 250.4 280 52.1
QL07p025881 Quercus lobata HOM05D007071 ORTHO05D008677 2.1e-64 250.0 290 51.0
CiPaw.09G025100 Carya illinoinensis HOM05D007071 ORTHO05D008677 7.9e-64 248.1 286 51.4
PGR004G1089 Punica granatum HOM05D007071 ORTHO05D008677 7.9e-64 248.1 280 51.1
FvH4_6g21190 Fragaria vesca HOM05D007071 ORTHO05D008677 1.8e-63 246.9 265 53.2
MBI11_g24568_MAGBIO Magnolia biondii HOM05D007071 ORTHO05D008677 1.8e-63 246.9 303 47.9
Lj1g0020560 Lotus japonicus HOM05D007071 ORTHO05D008677 3.0e-63 246.1 283 51.2
HanXRQChr11g0347671 Helianthus annuus HOM05D007071 ORTHO05D008677 3.9e-63 245.7 267 55.1
ECA248G1335 Erigeron canadensis HOM05D007071 ORTHO05D008677 1.9e-62 243.4 269 54.6
Cpa.g.sc222.1 Carica papaya HOM05D007071 ORTHO05D008677 4.3e-62 242.3 290 50.0
RcHm_v2.0_Chr3g0477671 Rosa chinensis HOM05D007071 ORTHO05D008677 4.3e-62 242.3 266 55.6
MD14G1046200 Malus domestica HOM05D007071 ORTHO05D008677 7.4e-62 241.5 273 52.7
Prupe.7G088000 Prunus persica HOM05D007071 ORTHO05D008677 1.6e-61 240.4 275 54.2
Sed0020351 Sechium edule HOM05D007071 ORTHO05D008677 1.6e-61 240.4 281 50.9
Glyma.19G203500 Glycine max HOM05D007071 ORTHO05D008677 3.7e-61 239.2 283 48.8
Sc01g0005210 Simmondsia chinensis HOM05D007071 ORTHO05D008677 4.8e-61 238.8 287 50.2
Sabra16G0066300 Salix brachista HOM05D007071 ORTHO05D008677 8.2e-61 238.0 338 44.7
VMungo1383G1243 Vigna mungo HOM05D007071 ORTHO05D008677 4.1e-60 235.7 282 48.6
Sp6g36270 Schrenkiella parvula HOM05D007071 ORTHO05D008677 1.2e-59 234.2 288 46.9
COL.COLO4_29462 Corchorus olitorius HOM05D007071 ORTHO05D008677 1.5e-59 233.8 245 53.5
Medtr7g107150 Medicago truncatula HOM05D007071 ORTHO05D008677 2.0e-59 233.4 285 49.1
CSS0047921 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 1.0e-58 231.1 190 68.4
Aa31sc291G40 Aethionema arabicum HOM05D007071 ORTHO05D008677 6.5e-58 228.4 283 47.7
MELO3C009585.2 Cucumis melo HOM05D007071 ORTHO05D008677 6.5e-58 228.4 295 47.8
Glyma.03G206000 Glycine max HOM05D007071 ORTHO05D008677 6.5e-58 228.4 283 48.1
TPR.G14411 Trifolium pratense HOM05D007071 ORTHO05D008677 8.5e-58 228.0 282 48.9
CsaV3_3G038410 Cucumis sativus L. HOM05D007071 ORTHO05D008677 1.4e-57 227.3 295 47.5
THA.LOC104809942 Tarenaya hassleriana HOM05D007071 ORTHO05D008677 5.5e-57 225.3 282 45.0
Sopen01g021160 Solanum pennellii HOM05D007071 ORTHO05D008677 9.4e-57 224.6 274 48.5
Thhalv10014151m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 1.0e-55 221.1 280 47.5
BolC9t59762H Brassica oleracea HOM05D007071 ORTHO05D008677 1.4e-55 220.7 268 47.8
A10p29800 Brassica napus HOM05D007071 ORTHO05D008677 1.8e-55 220.3 269 48.3
C09p70180 Brassica napus HOM05D007071 ORTHO05D008677 3.0e-55 219.5 268 47.4
BraA10t45019Z Brassica rapa HOM05D007071 ORTHO05D008677 2.5e-54 216.5 269 47.6
AL6G16680 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 1.3e-53 214.2 281 44.8
MSTRG.5919 Avicennia marina HOM05D007071 ORTHO05D008677 1.3e-53 214.2 278 47.1
Psat3g026600 Pisum sativum HOM05D007071 ORTHO05D008677 1.3e-53 214.2 276 47.5
AT5G06590 Arabidopsis thaliana HOM05D007071 ORTHO05D008677 2.2e-53 213.4 280 45.7
CARHR206610 Cardamine hirsuta HOM05D007071 ORTHO05D008677 3.7e-53 212.6 282 45.0
ClCG10G017880 Citrullus lanatus HOM05D007071 ORTHO05D008677 8.2e-53 211.5 355 42.0
Carub.0006s0547 Capsella rubella HOM05D007071 ORTHO05D008677 2.4e-52 209.9 278 45.7
Lalb_Chr25g0287781 Lupinus albus HOM05D007071 ORTHO05D008677 3.1e-52 209.5 284 46.1
FAN09G1879 Fragaria x ananassa HOM05D007071 ORTHO05D008677 4.5e-51 205.7 243 49.0
Phvul.001G199700 Phaseolus vulgaris HOM05D007071 ORTHO05D008677 1.3e-50 204.1 266 45.5
FAN14G3447 Fragaria x ananassa HOM05D007071 ORTHO05D008677 8.5e-50 201.4 234 50.4
SGA_v2.0_scaffold31G12809 Striga asiatica HOM05D007071 ORTHO05D008677 1.1e-49 201.1 273 46.5
Solyc01g056990.3 Solanum lycopersicum HOM05D007071 ORTHO05D008677 1.9e-49 200.3 256 46.5
arahy.Tifrunner.gnm1.ann1.P13BQJ Arachis hypogaea HOM05D007071 ORTHO05D008677 3.2e-49 199.5 266 46.6
arahy.Tifrunner.gnm1.ann1.B8MRUG Arachis hypogaea HOM05D007071 ORTHO05D008677 1.2e-48 197.6 266 46.6
Peaxi162Scf00425g00036 Petunia axillaris HOM05D007071 ORTHO05D008677 1.2e-48 197.6 271 44.3
Peaxi162Scf00645g00018 Petunia axillaris HOM05D007071 ORTHO05D008677 1.6e-48 197.2 271 43.9
Migut.J00748 Erythranthe guttata HOM05D007071 ORTHO05D008677 6.1e-48 195.3 268 46.3
Ciclev10012576m.g Citrus clementina HOM05D007071 ORTHO05D008677 6.7e-47 191.8 214 50.9
ATR0697G054 Amborella trichopoda HOM05D007071 ORTHO05D008677 2.0e-46 190.3 320 42.8
TAR633G1119 Trochodendron aralioides HOM05D007071 ORTHO05D008677 2.6e-46 189.9 198 54.0
Cc06_g07070 Coffea canephora HOM05D007071 ORTHO05D008677 7.4e-46 188.3 287 42.5
Hund10779 Selenicereus undatus HOM05D007071 ORTHO05D008677 1.3e-45 187.6 275 43.6
Nitab4.5_0000117g0100 Nicotiana tabacum HOM05D007071 ORTHO05D008677 3.7e-45 186.0 302 41.7
Ah.12g059560 Amaranthus hybridus HOM05D007071 ORTHO05D008677 4.1e-44 182.6 279 44.1
Thhalv10014358m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 3.5e-43 179.5 280 41.8
EL10Ac5g11787 Beta vulgaris HOM05D007071 ORTHO05D008677 6.5e-42 175.3 236 46.6
Oeu028127.1 Olea europaea HOM05D007071 ORTHO05D008677 2.5e-41 173.3 207 49.8
Haze_20090 Corylus avellana HOM05D007071 ORTHO05D008677 1.5e-38 164.1 220 45.0
Nitab4.5_0005508g0020 Nicotiana tabacum HOM05D007071 ORTHO05D008677 4.4e-38 162.5 240 45.4
AUR62036298 Chenopodium quinoa HOM05D007071 ORTHO05D008677 8.2e-37 158.3 285 41.4
Peaxi162Scf00414g00006 Petunia axillaris HOM05D007071 ORTHO05D008677 1.1e-36 157.9 265 40.0
Thecc.05G182200 Theobroma cacao HOM05D007071 ORTHO05D008677 4.1e-36 156.0 165 51.5
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 7.0e-36 155.2 285 40.7
SEGI_27522 Sequoiadendron giganteum HOM05D007071 ORTHO05D008677 1.0e-34 151.4 328 31.4
PGSC0003DMG400031498 Solanum tuberosum HOM05D007071 ORTHO05D008677 1.0e-34 151.4 239 42.7
Eucgr.A02532 Eucalyptus grandis HOM05D007071 ORTHO05D008677 1.9e-33 147.1 185 46.5
DCAR_020676 Daucus carota HOM05D007071 ORTHO05D008677 9.7e-30 134.8 123 59.3
CDE10G1223 Ceratophyllum demersum HOM05D007071 ORTHO05D008677 1.0e-26 124.8 145 49.0
Gohir.A06G128402 Gossypium hirsutum HOM05D007071 ORTHO05D008677 4.2e-25 119.4 159 44.0
Actinidia26606 Actinidia chinensis HOM05D002116 ORTHO05D002438 2.0e-22 110.5 105 58.1
Eucgr.C00285 Eucalyptus grandis HOM05D007071 ORTHO05D008677 1.3e-21 107.8 67 73.1
MD12G1047800 Malus domestica HOM05D007071 ORTHO05D008677 2.8e-21 106.7 88 64.8
Gohir.A07G056200 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.1e-20 104.8 121 49.6
Gorai.007G240500 Gossypium raimondii HOM05D007071 ORTHO05D008677 1.4e-20 104.4 127 49.6
Zm00001eb134480 Zea mays HOM05D007071 ORTHO05D008677 3.8e-18 96.3 219 36.1
Eucgr.A02531 Eucalyptus grandis HOM05D007071 ORTHO05D008677 1.5e-17 94.4 75 64.0
Gohir.A07G089166 Gossypium hirsutum HOM05D007071 ORTHO05D008677 4.2e-17 92.8 67 64.2
SHI31768 Sapria himalayana HOM05D007071 ORTHO05D008677 6.1e-16 89.0 72 61.1
TPR.G40805 Trifolium pratense HOM05D007071 ORTHO05D008677 1.3e-13 81.3 67 64.2
CSS0001330 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 2.2e-13 80.5 65 63.1
AagrBONN_evm.TU.Sc2ySwM_117.1490 Anthoceros agrestis HOM05D007071 ORTHO05D008677 4.9e-13 79.3 309 25.9
QL02p030777 Quercus lobata HOM05D007071 ORTHO05D008677 1.1e-12 78.2 45 80.0
Actinidia03957 Actinidia chinensis HOM05D002116 ORTHO05D002438 5.4e-12 75.9 41 90.2
CiPaw.16G104200 Carya illinoinensis HOM05D007071 ORTHO05D008677 1.2e-11 74.7 65 61.5
SMO165G0174 Selaginella moellendorffii HOM05D007071 ORTHO05D008677 1.0e-10 71.6 287 26.1
Pp3c26_10880 Physcomitrium patens HOM05D007071 ORTHO05D008677 1.7e-10 70.9 365 21.9
Os12g0623400 Oryza sativa ssp. japonica HOM05D007071 ORTHO05D008677 9.5e-09 65.1 79 45.6
PGSC0003DMG400019076 Solanum tuberosum HOM05D007071 ORTHO05D008677 2.8e-08 63.5 64 51.6
CBR_g40815 Chara braunii HOM05D007071 ORTHO05D008677 5.8e-06 55.8 102 32.4


User provided reference genes

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