Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 2.2e-134 482.3 233 100.0
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 1.3e-57 227.3 118 89.0
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 8.1e-57 224.6 118 89.0
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 1.5e-55 220.3 120 87.5
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 1.5e-55 220.3 118 86.4
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 7.6e-55 218.0 118 85.6
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 1.3e-54 217.2 117 87.2
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 1.3e-54 217.2 118 85.6
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 2.9e-54 216.1 118 87.3
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.1e-53 214.2 118 82.2
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 1.1e-53 214.2 123 80.5
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 1.1e-53 214.2 118 84.7
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 1.4e-53 213.8 118 84.7
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 1.4e-53 213.8 118 83.9
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 2.4e-53 213.0 117 85.5
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 5.5e-53 211.8 118 81.4
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 7.1e-53 211.5 116 85.3
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 7.1e-53 211.5 119 82.4
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 9.3e-53 211.1 121 80.2
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 9.3e-53 211.1 118 83.1
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 9.3e-53 211.1 119 81.5
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 9.3e-53 211.1 119 81.5
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 1.6e-52 210.3 117 83.8
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 2.1e-52 209.9 118 82.2
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 2.7e-52 209.5 123 78.0
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 2.7e-52 209.5 118 83.1
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 3.5e-52 209.1 123 78.0
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 3.5e-52 209.1 118 81.4
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 4.6e-52 208.8 117 83.8
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 4.6e-52 208.8 118 81.4
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 6.0e-52 208.4 118 81.4
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 7.9e-52 208.0 118 79.7
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 1.0e-51 207.6 118 80.5
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 1.3e-51 207.2 115 82.6
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 1.3e-51 207.2 118 80.5
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 1.8e-51 206.8 117 76.9
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 3.9e-51 205.7 119 82.4
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 1.5e-50 203.8 112 83.0
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 4.3e-50 202.2 117 80.3
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 4.3e-50 202.2 117 80.3
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 5.6e-50 201.8 120 79.2
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 9.6e-50 201.1 117 79.5
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 9.6e-50 201.1 100 94.0
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.3e-49 200.7 118 78.0
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 1.6e-49 200.3 117 78.6
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 3.7e-49 199.1 118 77.1
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 6.2e-49 198.4 118 76.3
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 8.2e-49 198.0 113 84.1
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 8.2e-49 198.0 118 76.3
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 8.2e-49 198.0 118 76.3
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 1.8e-48 196.8 110 80.9
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 3.1e-48 196.1 118 75.4
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 4.0e-48 195.7 131 71.0
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 6.9e-48 194.9 117 76.1
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 9.0e-48 194.5 112 81.2
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 1.2e-47 194.1 117 78.6
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 1.2e-47 194.1 116 77.6
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 5.8e-47 191.8 118 73.7
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 1.0e-46 191.0 116 77.6
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 3.8e-46 189.1 133 64.7
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 8.4e-46 188.0 118 72.9
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 1.4e-45 187.2 115 74.8
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 9.3e-45 184.5 118 73.7
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 1.6e-44 183.7 161 60.2
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 1.6e-44 183.7 115 75.7
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 2.7e-44 183.0 112 70.5
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 3.5e-44 182.6 119 70.6
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 3.5e-44 182.6 118 71.2
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 6.0e-44 181.8 115 73.0
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 1.0e-43 181.0 118 71.2
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 2.3e-43 179.9 118 71.2
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 3.0e-43 179.5 118 71.2
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 3.9e-43 179.1 166 55.4
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 3.9e-43 179.1 117 71.8
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 5.1e-43 178.7 118 70.3
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 5.1e-43 178.7 118 66.9
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 1.1e-42 177.6 99 81.8
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 1.1e-42 177.6 118 70.3
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 1.1e-42 177.6 117 71.8
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 1.1e-42 177.6 118 69.5
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 1.5e-42 177.2 113 70.8
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 1.9e-42 176.8 113 70.8
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 1.9e-42 176.8 119 68.1
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 2.5e-42 176.4 111 72.1
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 3.3e-42 176.0 119 66.4
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 5.7e-42 175.3 116 72.4
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 5.7e-42 175.3 102 78.4
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 5.7e-42 175.3 102 78.4
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 5.7e-42 175.3 102 78.4
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 5.7e-42 175.3 102 78.4
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 5.7e-42 175.3 102 78.4
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 5.7e-42 175.3 118 72.0
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 7.4e-42 174.9 102 77.5
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 7.4e-42 174.9 102 77.5
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 7.4e-42 174.9 114 71.9
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 1.3e-41 174.1 117 70.1
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 1.3e-41 174.1 117 70.1
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 2.8e-41 172.9 118 66.1
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 6.3e-41 171.8 117 69.2
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 6.3e-41 171.8 118 66.9
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 6.3e-41 171.8 104 76.9
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 6.3e-41 171.8 104 76.9
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 6.3e-41 171.8 118 68.6
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 8.2e-41 171.4 117 68.4
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 1.1e-40 171.0 102 74.5
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 2.4e-40 169.9 98 80.6
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 2.4e-40 169.9 120 66.7
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.7e-38 163.7 118 66.1
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 2.2e-38 163.3 158 53.2
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 5.0e-38 162.2 98 74.5
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 6.5e-38 161.8 117 66.7
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 7.9e-36 154.8 87 82.8
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 1.1e-34 151.0 102 66.7
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 2.8e-33 146.4 116 62.1
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 1.8e-32 143.7 84 77.4
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 1.5e-26 124.0 97 54.6
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 2.6e-26 123.2 101 54.5
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 2.6e-26 123.2 78 70.5
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 4.1e-24 115.9 101 51.5
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 2.0e-23 113.6 61 83.6
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 4.5e-23 112.5 97 52.6
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 3.8e-22 109.4 61 80.3
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 2.1e-20 103.6 98 52.0
Cpa.g.sc20.36 Carica papaya HOM05D005630 ORTHO05D006979 8.0e-20 101.7 113 50.4
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 1.8e-19 100.5 61 73.8
Eucgr.L01073 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.3e-17 94.4 58 74.1
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 2.2e-17 93.6 61 68.9
Nn2g11495 Nelumbo nucifera HOM05D005630 ORTHO05D006979 4.8e-17 92.4 54 72.2
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 1.1e-16 91.3 85 51.8
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 2.4e-16 90.1 58 70.7
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 7.0e-16 88.6 48 83.3
MBI07_g26347_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 2.6e-15 86.7 57 68.4
TPR.G10852 Trifolium pratense HOM05D005630 ORTHO05D006979 1.1e-13 81.3 55 69.1
SalBow1G6627 Salvia bowleyana HOM05D005630 ORTHO05D006979 2.6e-10 70.1 49 65.3
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 6.3e-09 65.5 48 56.2
MCO04G088 Micromonas commoda HOM05D005630 ORTHO05D006979 1.8e-08 63.9 101 29.7
Cre12.g558000 Chlamydomonas reinhardtii HOM05D005630 ORTHO05D006979 3.1e-08 63.2 96 34.4
Medtr5g037160 Medicago truncatula HOM05D005630 ORTHO05D000782 5.0e-06 55.8 34 70.6


User provided reference genes

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