Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0040600 Rhododendron simsii HOM05D008071 ORTHO05D009954 2.4e-88 328.9 179 100.0
THA.LOC104827706 Tarenaya hassleriana HOM05D008071 ORTHO05D009954 4.0e-19 99.0 129 40.3
Dinv06965 Davidia involucrata HOM05D008071 ORTHO05D009954 7.5e-18 94.7 124 46.0
QL07p015274 Quercus lobata HOM05D008071 ORTHO05D009954 3.1e-16 89.4 106 46.2
Nitab4.5_0000123g0160 Nicotiana tabacum HOM05D013183 ORTHO05D009954 4.1e-16 89.0 132 40.9
Thhalv10009029m.g Eutrema salsugineum HOM05D008071 ORTHO05D009954 7.0e-16 88.2 127 38.6
AL1G40040 Arabidopsis lyrata HOM05D008071 ORTHO05D009954 3.5e-15 85.9 127 39.4
Sp5g23220 Schrenkiella parvula HOM05D008071 ORTHO05D009954 4.5e-15 85.5 125 36.8
Carub.0001s2524 Capsella rubella HOM05D008071 ORTHO05D009954 5.9e-15 85.1 127 38.6
BcaC03g14931 Brassica carinata HOM05D008071 ORTHO05D009954 7.7e-15 84.7 125 36.0
BolC2t08535H Brassica oleracea HOM05D008071 ORTHO05D009954 7.7e-15 84.7 125 36.0
Nitab4.5_0006448g0040 Nicotiana tabacum HOM05D013183 ORTHO05D009954 7.7e-15 84.7 132 38.6
Aa31LG7G9180 Aethionema arabicum HOM05D008071 ORTHO05D009954 1.0e-14 84.3 127 35.4
BcaB05g24356 Brassica carinata HOM05D008071 ORTHO05D009954 1.0e-14 84.3 127 35.4
C02p24260 Brassica napus HOM05D008071 ORTHO05D009954 1.0e-14 84.3 125 36.0
BraA02t06549Z Brassica rapa HOM05D008071 ORTHO05D009954 1.0e-14 84.3 125 36.0
Rhsim03G0062600 Rhododendron simsii HOM05D063104 ORTHO05D009954 1.7e-14 83.6 113 52.2
CARHR136500 Cardamine hirsuta HOM05D008071 ORTHO05D009954 2.2e-14 83.2 133 39.8
A02p14820 Brassica napus HOM05D008071 ORTHO05D009954 8.5e-14 81.3 125 35.2
A07p31290 Brassica napus HOM05D008071 ORTHO05D009954 1.9e-13 80.1 126 36.5
BraA07t30762Z Brassica rapa HOM05D008071 ORTHO05D009954 1.9e-13 80.1 126 36.5
THA.LOC104827708 Tarenaya hassleriana HOM05D008071 ORTHO05D009954 1.9e-13 80.1 131 36.6
Carub.0001s2523 Capsella rubella HOM05D008071 ORTHO05D009954 5.5e-13 78.6 127 34.6
Carub.0001s2525 Capsella rubella HOM05D008071 ORTHO05D009954 8.0e-12 74.7 119 33.6
BolC4t28398H Brassica oleracea HOM05D008071 ORTHO05D009954 1.4e-11 73.9 127 36.2
BcaC02g12899 Brassica carinata HOM05D008071 ORTHO05D009954 1.8e-11 73.6 134 36.6
A04p31550 Brassica napus HOM05D008071 ORTHO05D009954 1.8e-11 73.6 127 37.0
BraA04t18611Z Brassica rapa HOM05D008071 ORTHO05D009954 1.8e-11 73.6 127 37.0
C04p68980 Brassica napus HOM05D008071 ORTHO05D009954 2.3e-11 73.2 127 37.0
DCAR_008209 Daucus carota HOM05D014896 ORTHO05D016270 1.2e-10 70.9 109 43.1
AT5G05020 Arabidopsis thaliana HOM05D008071 ORTHO05D009954 1.5e-10 70.5 126 34.1
BraA08t34634Z Brassica rapa HOM05D008071 ORTHO05D009954 5.7e-10 68.6 115 30.4
CARHR026190 Cardamine hirsuta HOM05D008071 ORTHO05D009954 5.7e-10 68.6 129 29.5
BcaC01g01683 Brassica carinata HOM05D008071 ORTHO05D009954 9.8e-10 67.8 115 29.6
BolC3t19602H Brassica oleracea HOM05D008071 ORTHO05D009954 9.8e-10 67.8 115 29.6
Sp2g26770 Schrenkiella parvula HOM05D008071 ORTHO05D009954 9.8e-10 67.8 115 34.8
Carub.0006s3123 Capsella rubella HOM05D008071 ORTHO05D009954 1.3e-09 67.4 132 33.3
BcaB03g12034 Brassica carinata HOM05D008071 ORTHO05D009954 1.7e-09 67.0 121 29.8
Eucgr.K01697 Eucalyptus grandis HOM05D008071 ORTHO05D009954 4.9e-09 65.5 130 36.2
CARHR026210 Cardamine hirsuta HOM05D008071 ORTHO05D009954 1.8e-08 63.5 131 29.8
Dinv13279 Davidia involucrata HOM05D008071 ORTHO05D009954 2.4e-08 63.2 128 35.9
Eucgr.K01698 Eucalyptus grandis HOM05D008071 ORTHO05D009954 2.4e-08 63.2 130 34.6
Nitab4.5_0000511g0080 Nicotiana tabacum HOM05D031502 ORTHO05D009954 4.5e-07 58.9 122 35.2
Rhsim03G0040900 Rhododendron simsii HOM05D063104 ORTHO05D009954 4.5e-07 58.9 135 40.7
PGSC0003DMG400026885 Solanum tuberosum HOM05D013183 ORTHO05D018130 4.5e-07 58.9 96 36.5
BcaB03g15516 Brassica carinata HOM05D008071 ORTHO05D009954 1.0e-06 57.8 126 29.4
DCAR_008212 Daucus carota HOM05D014896 ORTHO05D016270 2.9e-06 56.2 109 33.9
AT2G41400 Arabidopsis thaliana HOM05D008071 ORTHO05D009954 3.8e-06 55.8 115 27.8
CANSAT78G1840 Cannabis sativa HOM05D008071 ORTHO05D009954 6.6e-06 55.1 126 34.9


User provided reference genes

Program Settings