Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0030900 Rhododendron simsii HOM05D002173 ORTHO05D002189 3.1e-83 312.0 186 100.0
vmacro21955 Vaccinium macrocarpon HOM05D002173 ORTHO05D002189 8.0e-47 191.0 177 57.1
Actinidia09298 Actinidia chinensis HOM05D002173 ORTHO05D002189 3.6e-31 139.0 188 48.4
Actinidia39195 Actinidia chinensis HOM05D002173 ORTHO05D002189 5.0e-25 118.6 185 53.5
Actinidia38141 Actinidia chinensis HOM05D002173 ORTHO05D002189 6.6e-25 118.2 201 38.8
Dinv30304 Davidia involucrata HOM05D002173 ORTHO05D002189 5.5e-24 115.2 260 33.8
Dinv39677 Davidia involucrata HOM05D002173 ORTHO05D002189 5.5e-24 115.2 260 33.8
CSS0036465 Camellia sinensis var. sinensis HOM05D002173 ORTHO05D002189 4.7e-23 112.1 182 38.5
TAR369G1091 Trochodendron aralioides HOM05D002173 ORTHO05D002189 1.8e-22 110.2 199 36.7
TAR623G0334 Trochodendron aralioides HOM05D002173 ORTHO05D002189 2.7e-18 96.3 173 34.7
CSS0044762 Camellia sinensis var. sinensis HOM05D002173 ORTHO05D002189 8.6e-17 91.3 174 41.4
Ciclev10005335m.g Citrus clementina HOM05D002173 ORTHO05D002189 1.1e-16 90.9 200 38.0
Cc06_g18320 Coffea canephora HOM05D002173 ORTHO05D002189 8.9e-14 81.3 198 30.3
Actinidia17676 Actinidia chinensis HOM05D002173 ORTHO05D002189 6.4e-12 75.1 181 33.1
CiPaw.09G042000 Carya illinoinensis HOM05D002173 ORTHO05D002189 7.0e-11 71.6 148 31.1
Nn7g36438 Nelumbo nucifera HOM05D002173 ORTHO05D002189 2.7e-10 69.7 75 44.0
Gohir.D13G011700 Gossypium hirsutum HOM05D002173 ORTHO05D002189 6.0e-10 68.6 151 32.5
Gorai.013G012800 Gossypium raimondii HOM05D002173 ORTHO05D002189 2.3e-09 66.6 151 33.8
Gohir.A13G011000 Gossypium hirsutum HOM05D002173 ORTHO05D002189 3.0e-09 66.2 151 29.8
Thecc.05G145400 Theobroma cacao HOM05D002173 ORTHO05D002189 3.0e-09 66.2 165 38.8
GSVIVG01033550001 Vitis vinifera HOM05D002173 ORTHO05D002189 3.0e-09 66.2 76 42.1
Duzib128G1350 Durio zibethinus HOM05D002173 ORTHO05D002189 1.5e-08 63.9 159 27.7
Potri.016G042400 Populus trichocarpa HOM05D002173 ORTHO05D002189 3.3e-08 62.8 157 28.0
Aqoxy2G00260 Aquilegia oxysepala HOM05D002173 ORTHO05D002189 5.6e-08 62.0 77 41.6
COL.COLO4_21307 Corchorus olitorius HOM05D002173 ORTHO05D002189 7.3e-08 61.6 136 31.6
Manes.08G054000 Manihot esculenta HOM05D002173 ORTHO05D002189 1.2e-07 60.8 156 28.8
QL07p005240 Quercus lobata HOM05D002173 ORTHO05D002189 1.6e-07 60.5 177 28.8
Sabra16G0047900 Salix brachista HOM05D002173 ORTHO05D002189 1.6e-07 60.5 150 27.3
Duzib106G0754 Durio zibethinus HOM05D002173 ORTHO05D002189 4.7e-07 58.9 165 27.9
PSO384G0372 Papaver somniferum HOM05D002173 ORTHO05D002189 4.7e-07 58.9 78 47.4
Duzib093G0515 Durio zibethinus HOM05D002173 ORTHO05D002189 8.0e-07 58.2 165 27.9
PSO339G1669 Papaver somniferum HOM05D002173 ORTHO05D002189 1.1e-06 57.8 78 47.4


User provided reference genes

Program Settings