Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0024500 Rhododendron simsii HOM05D007137 ORTHO05D008982 1.7e-52 209.1 110 100.0
Rhsim03G0024600 Rhododendron simsii HOM05D007137 ORTHO05D008982 7.6e-21 104.0 63 87.3
Rhsim03G0024200 Rhododendron simsii HOM05D007137 ORTHO05D008982 2.9e-20 102.1 106 59.4
Rhsim03G0024800 Rhododendron simsii HOM05D007137 ORTHO05D008982 4.9e-20 101.3 63 84.1
vmacro07849 Vaccinium macrocarpon HOM05D007137 ORTHO05D008982 6.0e-18 94.4 85 64.7
Dinv39605 Davidia involucrata HOM05D007137 ORTHO05D008982 2.4e-11 72.4 59 62.7
Cfa016812 Carpinus fangiana HOM05D007137 ORTHO05D008982 5.4e-11 71.2 49 69.4
AUR62024453 Chenopodium quinoa HOM05D007137 ORTHO05D008982 9.3e-11 70.5 50 64.0
Sc13g0001720 Simmondsia chinensis HOM05D007137 ORTHO05D008982 1.6e-10 69.7 50 66.0
Actinidia09328 Actinidia chinensis HOM05D007137 ORTHO05D008982 4.6e-10 68.2 59 57.6
MSTRG.6429 Avicennia marina HOM05D007137 ORTHO05D008982 7.8e-10 67.4 62 50.0
DCAR_020492 Daucus carota HOM05D007137 ORTHO05D008982 7.8e-10 67.4 63 54.0
SGA_v2.0_scaffold105G30410 Striga asiatica HOM05D007137 ORTHO05D008982 1.0e-09 67.0 49 61.2
Eucgr.A02346 Eucalyptus grandis HOM05D007137 ORTHO05D008982 1.3e-09 66.6 58 58.6
CSS0026997 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 1.7e-09 66.2 59 55.9
AUR62026042 Chenopodium quinoa HOM05D007137 ORTHO05D008982 3.0e-09 65.5 50 60.0
EL10Ac3g07093 Beta vulgaris HOM05D007137 ORTHO05D008982 5.1e-09 64.7 50 60.0
Cc06_g17570 Coffea canephora HOM05D007137 ORTHO05D008982 5.1e-09 64.7 50 62.0
Hma1.2p1_2002F.1_g310780 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 6.6e-09 64.3 50 64.0
Lju124C41G12 Lonicera japonica HOM05D007137 ORTHO05D008982 6.6e-09 64.3 50 60.0
Sabra06G0036100 Salix brachista HOM05D007137 ORTHO05D008982 8.7e-09 63.9 58 55.2
TAR369G0818 Trochodendron aralioides HOM05D007137 ORTHO05D008982 8.7e-09 63.9 59 55.9
Nitab4.5_0010636g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 1.1e-08 63.5 59 52.5
Migut.J01757 Erythranthe guttata HOM05D007137 ORTHO05D008982 1.5e-08 63.2 61 49.2
CANSAT80G1960 Cannabis sativa HOM05D007137 ORTHO05D008982 1.9e-08 62.8 49 61.2
FAN09G1348 Fragaria x ananassa HOM05D007137 ORTHO05D008982 2.5e-08 62.4 49 59.2
Potri.006G051500 Populus trichocarpa HOM05D007137 ORTHO05D008982 2.5e-08 62.4 58 53.4
PGR004G0226 Punica granatum HOM05D007137 ORTHO05D008982 2.5e-08 62.4 49 59.2
RcHm_v2.0_Chr3g0482531 Rosa chinensis HOM05D007137 ORTHO05D008982 2.5e-08 62.4 49 61.2
SalBow6G6768 Salvia bowleyana HOM05D007137 ORTHO05D008982 2.5e-08 62.4 61 47.5
Thecc.05G153200 Theobroma cacao HOM05D007137 ORTHO05D008982 2.5e-08 62.4 49 63.3
TWI74G1615 Tripterygium wilfordii HOM05D007137 ORTHO05D008982 3.3e-08 62.0 49 59.2
HanXRQChr15g0491151 Helianthus annuus HOM05D007137 ORTHO05D008982 4.3e-08 61.6 62 48.4
Nitab4.5_0005195g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 4.3e-08 61.6 59 50.8
Manes.09G022100 Manihot esculenta HOM05D007137 ORTHO05D008982 5.6e-08 61.2 59 49.2
CANSAT80G0539 Cannabis sativa HOM05D007137 ORTHO05D008982 9.6e-08 60.5 49 59.2
QL07p000577 Quercus lobata HOM05D007137 ORTHO05D008982 9.6e-08 60.5 48 64.6
Haze_19852 Corylus avellana HOM05D007137 ORTHO05D008982 1.3e-07 60.1 50 60.0
Duzib093G1775 Durio zibethinus HOM05D007137 ORTHO05D008982 1.3e-07 60.1 49 59.2
FvH4_6g23850 Fragaria vesca HOM05D007137 ORTHO05D008982 1.6e-07 59.7 49 55.1
Prupe.7G059700 Prunus persica HOM05D007137 ORTHO05D008982 1.6e-07 59.7 49 55.1
FAN05G2215 Fragaria x ananassa HOM05D007137 ORTHO05D008982 2.1e-07 59.3 49 57.1
Peaxi162Scf00130g00019 Petunia axillaris HOM05D007137 ORTHO05D008982 2.1e-07 59.3 50 56.0
ECA247G4023 Erigeron canadensis HOM05D007137 ORTHO05D008982 2.8e-07 58.9 49 51.0
Lsat_1_v5_gn_9_29000 Lactuca sativa HOM05D007137 ORTHO05D008982 4.8e-07 58.2 62 45.2
MD12G1074200 Malus domestica HOM05D007137 ORTHO05D008982 4.8e-07 58.2 49 59.2
CAN.G1456.1 Capsicum annuum HOM05D007137 ORTHO05D008982 6.2e-07 57.8 59 49.2
GSVIVG01033260001 Vitis vinifera HOM05D007137 ORTHO05D008982 6.2e-07 57.8 59 49.2
Atru.BG.154.p Acer truncatum HOM05D007137 ORTHO05D008982 1.1e-06 57.0 49 57.1
Sopen04g007840 Solanum pennellii HOM05D007137 ORTHO05D008982 1.4e-06 56.6 50 54.0
PGSC0003DMG400027277 Solanum tuberosum HOM05D007137 ORTHO05D008982 1.4e-06 56.6 59 47.5
Ciclev10005859m.g Citrus clementina HOM05D007137 ORTHO05D008982 1.8e-06 56.2 58 53.4
Solyc04g015760.4 Solanum lycopersicum HOM05D007137 ORTHO05D008982 1.8e-06 56.2 50 54.0
Gohir.A09G122000 Gossypium hirsutum HOM05D007137 ORTHO05D008982 3.1e-06 55.5 49 55.1
Gohir.D09G118100 Gossypium hirsutum HOM05D007137 ORTHO05D008982 3.1e-06 55.5 49 55.1
Gorai.006G136400 Gossypium raimondii HOM05D007137 ORTHO05D008982 3.1e-06 55.5 49 55.1
Nn2g15218 Nelumbo nucifera HOM05D007137 ORTHO05D008982 3.1e-06 55.5 49 49.0
Hund24707 Selenicereus undatus HOM05D007137 ORTHO05D008982 3.1e-06 55.5 50 56.0
ClCG10G017100 Citrullus lanatus HOM05D007137 ORTHO05D008982 5.3e-06 54.7 49 59.2


User provided reference genes

Program Settings