Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0024300 Rhododendron simsii HOM05D007273 ORTHO05D009230 3.7e-82 308.1 154 100.0
Rhsim03G0024400 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.0e-79 300.1 154 96.8
Rhsim03G0024700 Rhododendron simsii HOM05D007273 ORTHO05D009230 2.9e-71 271.9 152 88.8
Rhsim03G0024900 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.1e-70 270.0 152 90.1
vmacro07848 Vaccinium macrocarpon HOM05D007273 ORTHO05D009230 1.2e-61 240.0 152 80.9
Actinidia39224 Actinidia chinensis HOM05D007273 ORTHO05D009230 1.6e-53 213.0 138 80.4
Dinv12487 Davidia involucrata HOM05D007273 ORTHO05D009230 1.5e-51 206.5 144 71.5
Rhsim03G0023900 Rhododendron simsii HOM05D007273 ORTHO05D009230 4.9e-50 201.4 149 72.5
TAR369G0984 Trochodendron aralioides HOM05D007273 ORTHO05D009230 8.6e-47 190.7 151 66.2
Lsat_1_v5_gn_9_29100 Lactuca sativa HOM05D007273 ORTHO05D009230 3.1e-44 182.2 142 63.4
Nn2g15217 Nelumbo nucifera HOM05D007273 ORTHO05D009230 9.8e-43 177.2 143 64.3
Peaxi162Scf00002g02715 Petunia axillaris HOM05D007273 ORTHO05D009230 1.3e-42 176.8 138 63.0
Solyc02g087600.3 Solanum lycopersicum HOM05D007273 ORTHO05D009230 3.7e-42 175.3 138 62.3
Cfa016813 Carpinus fangiana HOM05D007273 ORTHO05D009230 4.9e-42 174.9 148 62.2
PGSC0003DMG401001308 Solanum tuberosum HOM05D007273 ORTHO05D009230 4.9e-42 174.9 138 61.6
Oeu017941.1 Olea europaea HOM05D007273 ORTHO05D009230 1.1e-41 173.7 134 63.4
Haze_19853 Corylus avellana HOM05D007273 ORTHO05D009230 1.4e-41 173.3 148 62.2
CAN.G417.4 Capsicum annuum HOM05D007273 ORTHO05D009230 3.2e-41 172.2 138 62.3
EL10Ac3g07092 Beta vulgaris HOM05D007273 ORTHO05D009230 5.4e-41 171.4 140 60.0
ECA247G0394 Erigeron canadensis HOM05D007273 ORTHO05D009230 7.1e-41 171.0 141 59.6
Sopen02g032350 Solanum pennellii HOM05D007273 ORTHO05D009230 7.1e-41 171.0 138 60.9
Nitab4.5_0000082g0140 Nicotiana tabacum HOM05D007273 ORTHO05D009230 9.2e-41 170.6 138 60.1
MSTRG.6428 Avicennia marina HOM05D007273 ORTHO05D009230 1.2e-40 170.2 145 55.9
HanXRQChr05g0128781 Helianthus annuus HOM05D007273 ORTHO05D009230 1.2e-40 170.2 145 60.0
Lj1g0021019 Lotus japonicus HOM05D007273 ORTHO05D009230 2.3e-39 166.0 149 59.1
CiPaw.09G038500 Carya illinoinensis HOM05D007273 ORTHO05D009230 3.9e-39 165.2 142 62.7
AUR62024452 Chenopodium quinoa HOM05D007273 ORTHO05D009230 6.6e-39 164.5 131 63.4
SalBow6G5536 Salvia bowleyana HOM05D007273 ORTHO05D009230 6.6e-39 164.5 143 58.7
arahy.Tifrunner.gnm1.ann1.J7IQUN Arachis hypogaea HOM05D007273 ORTHO05D009230 1.1e-38 163.7 141 62.4
Cc06_g17580 Coffea canephora HOM05D007273 ORTHO05D009230 3.3e-38 162.2 142 57.7
MBI17_g36895_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 3.3e-38 162.2 143 56.6
Sc25g0005300 Simmondsia chinensis HOM05D007273 ORTHO05D009230 3.3e-38 162.2 143 60.1
AUR62026041 Chenopodium quinoa HOM05D007273 ORTHO05D009230 5.6e-38 161.4 131 61.8
Aqoxy1G00330 Aquilegia oxysepala HOM05D007273 ORTHO05D009230 7.3e-38 161.0 137 60.6
Ca_08456_v3 Cicer arietinum L. HOM05D007273 ORTHO05D009230 1.2e-37 160.2 135 63.0
Psat3g072760 Pisum sativum HOM05D007273 ORTHO05D009230 2.1e-37 159.5 147 61.2
Glyma.03G136600 Glycine max HOM05D007273 ORTHO05D009230 6.2e-37 157.9 149 59.7
VMungo1383G0084 Vigna mungo HOM05D007273 ORTHO05D009230 6.2e-37 157.9 148 57.4
DCAR_003245 Daucus carota HOM05D007273 ORTHO05D009230 8.1e-37 157.5 139 58.3
Migut.J01756 Erythranthe guttata HOM05D007273 ORTHO05D009230 8.1e-37 157.5 126 61.9
Lalb_Chr01g0017311 Lupinus albus HOM05D007273 ORTHO05D009230 1.1e-36 157.1 140 60.7
Prupe.7G059600 Prunus persica HOM05D007273 ORTHO05D009230 2.3e-36 156.0 139 61.9
RcHm_v2.0_Chr3g0482541 Rosa chinensis HOM05D007273 ORTHO05D009230 4.0e-36 155.2 143 58.7
Medtr7g091490 Medicago truncatula HOM05D007273 ORTHO05D009230 5.2e-36 154.8 136 61.0
CANSAT80G0412 Cannabis sativa HOM05D007273 ORTHO05D009230 6.8e-36 154.5 141 58.9
Nitab4.5_0010316g0010 Nicotiana tabacum HOM05D007273 ORTHO05D009230 8.9e-36 154.1 122 61.5
SGA_v2.0_scaffold69G23119 Striga asiatica HOM05D007273 ORTHO05D009230 2.0e-35 152.9 135 58.5
CANSAT80G2704 Cannabis sativa HOM05D007273 ORTHO05D009230 2.6e-35 152.5 141 56.7
Phvul.001G131900 Phaseolus vulgaris HOM05D007273 ORTHO05D009230 3.4e-35 152.1 147 55.1
Sabra06G0036200 Salix brachista HOM05D007273 ORTHO05D009230 1.7e-34 149.8 144 54.9
ClCG04G000150 Citrullus lanatus HOM05D007273 ORTHO05D009230 4.9e-34 148.3 143 58.0
PSO339G1789 Papaver somniferum HOM05D007273 ORTHO05D009230 6.4e-34 147.9 147 55.1
Potri.006G051600 Populus trichocarpa HOM05D007273 ORTHO05D009230 6.4e-34 147.9 146 52.7
Eucgr.A02345 Eucalyptus grandis HOM05D007273 ORTHO05D009230 8.4e-34 147.5 139 53.2
PSO384G4400 Papaver somniferum HOM05D007273 ORTHO05D009230 1.4e-33 146.7 150 54.0
Gohir.D09G118000 Gossypium hirsutum HOM05D007273 ORTHO05D009230 1.6e-32 143.3 142 51.4
CsaV3_4G011670 Cucumis sativus L. HOM05D007273 ORTHO05D009230 2.1e-32 142.9 137 56.9
COL.COLO4_28286 Corchorus olitorius HOM05D007273 ORTHO05D009230 2.7e-32 142.5 145 51.0
Gorai.006G136300 Gossypium raimondii HOM05D007273 ORTHO05D009230 4.6e-32 141.7 140 51.4
Cpa.g.sc92.54 Carica papaya HOM05D007273 ORTHO05D009230 1.3e-31 140.2 152 52.0
Gohir.A09G121900 Gossypium hirsutum HOM05D007273 ORTHO05D009230 1.3e-31 140.2 142 50.7
FAN05G2271 Fragaria x ananassa HOM05D007273 ORTHO05D009230 5.1e-31 138.3 138 54.3
Manes.09G022200 Manihot esculenta HOM05D007273 ORTHO05D009230 6.6e-31 137.9 132 56.8
Carub.0004s2403 Capsella rubella HOM05D007273 ORTHO05D009230 8.6e-31 137.5 141 53.9
AL4G40060 Arabidopsis lyrata HOM05D007273 ORTHO05D009230 1.1e-30 137.1 146 54.1
AT2G41750 Arabidopsis thaliana HOM05D007273 ORTHO05D009230 1.5e-30 136.7 146 53.4
FvH4_6g23860 Fragaria vesca HOM05D007273 ORTHO05D009230 1.5e-30 136.7 138 53.6
QL07p000584 Quercus lobata HOM05D007273 ORTHO05D009230 1.5e-30 136.7 153 53.6
TWI74G1215 Tripterygium wilfordii HOM05D007273 ORTHO05D009230 2.5e-30 136.0 140 49.3
Thecc.05G153100 Theobroma cacao HOM05D007273 ORTHO05D009230 3.3e-30 135.6 142 50.0
Lju124C41T6 Lonicera japonica HOM05D007273 ORTHO05D009230 5.6e-30 134.8 98 69.4
unitig_8.g4551 Utricularia gibba HOM05D007273 ORTHO05D009230 5.6e-30 134.8 124 57.3
CARHR136850 Cardamine hirsuta HOM05D007273 ORTHO05D009230 1.6e-29 133.3 146 51.4
THA.LOC104802102 Tarenaya hassleriana HOM05D007273 ORTHO05D009230 1.6e-29 133.3 139 52.5
Ciclev10033324m.g Citrus clementina HOM05D007273 ORTHO05D009230 2.8e-29 132.5 140 51.4
Thhalv10017127m.g Eutrema salsugineum HOM05D007273 ORTHO05D009230 2.8e-29 132.5 139 52.5
Sp4g24020 Schrenkiella parvula HOM05D007273 ORTHO05D009230 8.9e-28 127.5 149 47.7
Aa31LG1G23760 Aethionema arabicum HOM05D007273 ORTHO05D009230 2.0e-27 126.3 145 48.3
ATR0626G250 Amborella trichopoda HOM05D007273 ORTHO05D009230 2.6e-27 125.9 114 53.5
BcaNung02834 Brassica carinata HOM05D007273 ORTHO05D009230 4.4e-27 125.2 146 48.6
PGR004G1947 Punica granatum HOM05D007273 ORTHO05D009230 4.4e-27 125.2 111 56.8
C04p02970 Brassica napus HOM05D007273 ORTHO05D009230 5.8e-27 124.8 146 49.3
HPP92_016047 Vanilla planifolia HOM05D007273 ORTHO05D009230 9.9e-27 124.0 141 48.2
SEGI_31103 Sequoiadendron giganteum HOM05D007273 ORTHO05D009230 1.7e-26 123.2 118 53.4
BolC4t21937H Brassica oleracea HOM05D003650 ORTHO05D004213 2.9e-26 122.5 146 47.3
A05p02510 Brassica napus HOM05D007273 ORTHO05D009230 3.8e-26 122.1 146 47.9
BraA05t19244Z Brassica rapa HOM05D007273 ORTHO05D009230 3.8e-26 122.1 146 47.9
FAN09G1358 Fragaria x ananassa HOM05D007273 ORTHO05D009230 4.9e-26 121.7 138 50.0
Pp3c17_17160 Physcomitrium patens HOM05D007273 ORTHO05D009230 1.1e-25 120.6 131 48.9
MBI17_g14625_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 3.2e-25 119.0 97 60.8
Sed0019353 Sechium edule HOM05D007273 ORTHO05D009230 1.6e-24 116.7 134 53.0
Mapoly0023s0152 Marchantia polymorpha HOM05D007273 ORTHO05D009230 6.6e-23 111.3 123 48.8
Glyma.19G139000 Glycine max HOM05D007273 ORTHO05D009230 2.5e-22 109.4 95 58.9
Os12g0142600 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 2.5e-22 109.4 122 51.6
Os11g0145100 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 4.3e-22 108.6 122 50.8
SMO240G0020 Selaginella moellendorffii HOM05D007273 ORTHO05D009230 4.2e-17 92.0 120 45.0
Ah.04g151620 Amaranthus hybridus HOM05D007273 ORTHO05D009230 3.5e-16 89.0 72 61.1
Zm00001eb163370 Zea mays HOM05D007273 ORTHO05D009230 3.5e-16 89.0 159 37.1
TPR.G3731 Trifolium pratense HOM05D007273 ORTHO05D009230 4.9e-10 68.6 61 59.0
AagrBONN_evm.TU.Sc2ySwM_228.793 Anthoceros agrestis HOM05D007273 ORTHO05D009230 1.9e-09 66.6 51 58.8


User provided reference genes

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