Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0005900 Rhododendron simsii HOM05D007306 ORTHO05D009112 3.1e-63 245.0 125 100.0
vmacro07907 Vaccinium macrocarpon HOM05D007306 ORTHO05D009112 1.1e-47 193.4 129 82.2
Actinidia32393 Actinidia chinensis HOM05D007306 ORTHO05D009112 1.4e-31 139.8 132 60.6
Hma1.2p1_0386F.1_g141880 Hydrangea macrophylla HOM05D007306 ORTHO05D009112 9.2e-31 137.1 140 58.6
Actinidia22036 Actinidia chinensis HOM05D007306 ORTHO05D009112 5.9e-30 134.4 133 59.4
Nitab4.5_0001137g0060 Nicotiana tabacum HOM05D007306 ORTHO05D009112 7.8e-30 134.0 136 56.6
Peaxi162Scf00258g00720 Petunia axillaris HOM05D007306 ORTHO05D009112 1.3e-29 133.3 135 57.0
Dinv14300 Davidia involucrata HOM05D007306 ORTHO05D009112 5.0e-29 131.3 145 57.2
Nitab4.5_0007619g0010 Nicotiana tabacum HOM05D007306 ORTHO05D009112 1.1e-28 130.2 137 54.7
QL07p023738 Quercus lobata HOM05D007306 ORTHO05D009112 8.0e-27 124.0 140 55.7
Phvul.007G259800 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 6.8e-26 120.9 124 54.8
Nn2g15686 Nelumbo nucifera HOM05D007306 ORTHO05D009112 3.4e-25 118.6 133 54.9
Cpa.g.sc85.66 Carica papaya HOM05D007306 ORTHO05D009112 4.4e-25 118.2 128 56.2
Duzib093G0428 Durio zibethinus HOM05D007306 ORTHO05D009112 4.4e-25 118.2 140 49.3
TAR623G0307 Trochodendron aralioides HOM05D007306 ORTHO05D009112 7.5e-25 117.5 141 51.8
Gohir.A01G191300 Gossypium hirsutum HOM05D007306 ORTHO05D009112 9.8e-25 117.1 144 51.4
Gorai.002G224300 Gossypium raimondii HOM05D007306 ORTHO05D009112 9.8e-25 117.1 144 51.4
Atru.chr8.1112 Acer truncatum HOM05D007306 ORTHO05D009112 1.7e-24 116.3 136 52.9
Gohir.D01G178600 Gossypium hirsutum HOM05D007306 ORTHO05D009112 2.9e-24 115.5 144 47.2
CANSAT64G1677 Cannabis sativa HOM05D007306 ORTHO05D009112 4.9e-24 114.8 140 49.3
Oeu063786.1 Olea europaea HOM05D007306 ORTHO05D009112 4.9e-24 114.8 125 55.2
Thecc.05G171400 Theobroma cacao HOM05D007306 ORTHO05D009112 4.9e-24 114.8 150 48.7
SalBow6G0438 Salvia bowleyana HOM05D007306 ORTHO05D009112 8.3e-24 114.0 133 50.4
SalBow6G2293 Salvia bowleyana HOM05D007306 ORTHO05D009112 8.3e-24 114.0 133 50.4
PGR004G2053 Punica granatum HOM05D007306 ORTHO05D009112 1.1e-23 113.6 137 50.4
Solyc03g120950.3 Solanum lycopersicum HOM05D007306 ORTHO05D009112 1.9e-23 112.8 122 53.3
Sopen03g039780 Solanum pennellii HOM05D007306 ORTHO05D009112 1.9e-23 112.8 122 53.3
CiPaw.09G030300 Carya illinoinensis HOM05D007306 ORTHO05D009112 2.4e-23 112.5 139 51.1
TWI74G1393 Tripterygium wilfordii HOM05D007306 ORTHO05D009112 3.2e-23 112.1 126 52.4
Cc06_g15870 Coffea canephora HOM05D007306 ORTHO05D009112 4.1e-23 111.7 151 44.4
COL.COLO4_33982 Corchorus olitorius HOM05D007306 ORTHO05D009112 7.0e-23 110.9 154 49.4
arahy.Tifrunner.gnm1.ann1.I9AM74 Arachis hypogaea HOM05D007306 ORTHO05D009112 9.2e-23 110.5 142 49.3
Cfa020165 Carpinus fangiana HOM05D007306 ORTHO05D009112 1.2e-22 110.2 145 49.7
Migut.J01836 Erythranthe guttata HOM05D007306 ORTHO05D009112 1.2e-22 110.2 137 48.9
Potri.006G192500 Populus trichocarpa HOM05D007306 ORTHO05D009112 1.2e-22 110.2 146 46.6
arahy.Tifrunner.gnm1.ann1.T0JWFY Arachis hypogaea HOM05D007306 ORTHO05D009112 2.7e-22 109.0 142 49.3
MD14G1057700 Malus domestica HOM05D007306 ORTHO05D009112 2.7e-22 109.0 140 52.1
SGA_v2.0_scaffold69G23062 Striga asiatica HOM05D007306 ORTHO05D009112 2.7e-22 109.0 122 53.3
Aqoxy1G00127 Aquilegia oxysepala HOM05D007306 ORTHO05D009112 3.5e-22 108.6 142 50.0
PGSC0003DMG400002614 Solanum tuberosum HOM05D007306 ORTHO05D009112 3.5e-22 108.6 122 51.6
CiPaw.10G026400 Carya illinoinensis HOM05D007306 ORTHO05D009112 6.0e-22 107.8 139 48.9
FvH4_6g22320 Fragaria vesca HOM05D007306 ORTHO05D009112 1.0e-21 107.1 140 47.1
FAN05G3567 Fragaria x ananassa HOM05D007306 ORTHO05D009112 1.0e-21 107.1 140 47.1
FAN14G0362 Fragaria x ananassa HOM05D007306 ORTHO05D009112 1.0e-21 107.1 140 47.1
HanXRQChr13g0390881 Helianthus annuus HOM05D007306 ORTHO05D009112 1.0e-21 107.1 130 47.7
MD12G1057100 Malus domestica HOM05D007306 ORTHO05D009112 1.7e-21 106.3 144 47.9
Psat3g068560 Pisum sativum HOM05D007306 ORTHO05D009112 2.3e-21 105.9 131 50.4
Prupe.7G077000 Prunus persica HOM05D007306 ORTHO05D009112 3.9e-21 105.1 141 49.6
Lsat_1_v5_gn_5_163480 Lactuca sativa HOM05D007306 ORTHO05D009112 8.6e-21 104.0 147 46.9
RcHm_v2.0_Chr3g0479681 Rosa chinensis HOM05D007306 ORTHO05D009112 8.6e-21 104.0 137 46.7
Manes.08G044500 Manihot esculenta HOM05D007306 ORTHO05D009112 1.1e-20 103.6 147 44.9
Potri.016G045700 Populus trichocarpa HOM05D007306 ORTHO05D009112 1.1e-20 103.6 144 44.4
Ciclev10013031m.g Citrus clementina HOM05D007306 ORTHO05D009112 1.5e-20 103.2 145 44.1
FAN09G2453 Fragaria x ananassa HOM05D007306 ORTHO05D009112 1.5e-20 103.2 138 46.4
MSTRG.19909 Avicennia marina HOM05D007306 ORTHO05D009112 3.3e-20 102.1 139 46.8
Glyma.09G111500 Glycine max HOM05D007306 ORTHO05D009112 4.3e-20 101.7 126 47.6
Lalb_Chr18g0047871 Lupinus albus HOM05D007306 ORTHO05D009112 4.3e-20 101.7 127 49.6
Sed0004413 Sechium edule HOM05D007306 ORTHO05D009112 4.3e-20 101.7 124 50.0
Lj1g0014955 Lotus japonicus HOM05D007306 ORTHO05D009112 5.6e-20 101.3 128 49.2
DCAR_017009 Daucus carota HOM05D004472 ORTHO05D007169 7.3e-20 100.9 133 45.1
FAN02G3291 Fragaria x ananassa HOM05D007306 ORTHO05D009112 9.5e-20 100.5 138 44.9
PSO339G5155 Papaver somniferum HOM05D007306 ORTHO05D009112 9.5e-20 100.5 138 47.8
PSO384G4645 Papaver somniferum HOM05D007306 ORTHO05D009112 9.5e-20 100.5 138 47.8
AL4G40480 Arabidopsis lyrata HOM05D007306 ORTHO05D009112 1.6e-19 99.8 129 47.3
AT2G42110 Arabidopsis thaliana HOM05D007306 ORTHO05D009112 2.8e-19 99.0 132 46.2
VMungo1383G3094 Vigna mungo HOM05D007306 ORTHO05D009112 2.8e-19 99.0 128 50.8
CAN.G1143.4 Capsicum annuum HOM05D007306 ORTHO05D009112 3.6e-19 98.6 131 51.1
BcaNung04408 Brassica carinata HOM05D007306 ORTHO05D009112 4.7e-19 98.2 135 46.7
CARHR137170 Cardamine hirsuta HOM05D007306 ORTHO05D009112 4.7e-19 98.2 131 43.5
BcaC02g12458 Brassica carinata HOM05D007306 ORTHO05D009112 6.2e-19 97.8 130 48.5
BcaC02g12459 Brassica carinata HOM05D007306 ORTHO05D009112 6.2e-19 97.8 130 48.5
C04p03260 Brassica napus HOM05D007306 ORTHO05D009112 6.2e-19 97.8 130 48.5
BolC4t21964H Brassica oleracea HOM05D007306 ORTHO05D009112 6.2e-19 97.8 130 48.5
MELO3C009626.2 Cucumis melo HOM05D007306 ORTHO05D009112 6.2e-19 97.8 134 44.8
A05p02730 Brassica napus HOM05D007306 ORTHO05D009112 8.0e-19 97.4 136 46.3
BraA05t19265Z Brassica rapa HOM05D007306 ORTHO05D009112 8.0e-19 97.4 136 46.3
CsaV3_3G038820 Cucumis sativus L. HOM05D007306 ORTHO05D009112 1.1e-18 97.1 136 44.9
Manes.09G035400 Manihot esculenta HOM05D007306 ORTHO05D009112 1.1e-18 97.1 126 50.0
Hund24792 Selenicereus undatus HOM05D007306 ORTHO05D009112 1.1e-18 97.1 152 47.4
Glyma.03G144700 Glycine max HOM05D007306 ORTHO05D009112 1.8e-18 96.3 128 48.4
Phvul.001G142300 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 1.8e-18 96.3 127 50.4
Aa31LG1G24110 Aethionema arabicum HOM05D007306 ORTHO05D009112 3.1e-18 95.5 135 45.9
Medtr7g093220 Medicago truncatula HOM05D007306 ORTHO05D009112 3.1e-18 95.5 130 47.7
Carub.0004s2445 Capsella rubella HOM05D007306 ORTHO05D009112 5.2e-18 94.7 137 42.3
ClCG10G017530 Citrullus lanatus HOM05D007306 ORTHO05D009112 5.2e-18 94.7 133 45.1
TPR.G22157 Trifolium pratense HOM05D007306 ORTHO05D009112 5.2e-18 94.7 131 48.1
VMungo0720G2523 Vigna mungo HOM05D007306 ORTHO05D009112 6.8e-18 94.4 123 46.3
Duzib106G0602 Durio zibethinus HOM05D007306 ORTHO05D009112 1.5e-17 93.2 146 43.8
Thhalv10017403m.g Eutrema salsugineum HOM05D007306 ORTHO05D009112 1.5e-17 93.2 128 44.5
Sabra16G0049700 Salix brachista HOM05D007306 ORTHO05D009112 2.0e-17 92.8 101 51.5
GSVIVG01033497001 Vitis vinifera HOM05D007306 ORTHO05D009112 1.3e-16 90.1 128 43.0
Sp4g24320 Schrenkiella parvula HOM05D007306 ORTHO05D009112 1.7e-16 89.7 129 41.1
ECA248G3448 Erigeron canadensis HOM05D007306 ORTHO05D009112 6.4e-16 87.8 140 42.1
Glyma.19G147700 Glycine max HOM05D007306 ORTHO05D009112 1.9e-15 86.3 123 46.3
MBI06_g29488_MAGBIO Magnolia biondii HOM05D007306 ORTHO05D009112 1.6e-14 83.2 127 46.5
AUR62012035 Chenopodium quinoa HOM05D007306 ORTHO05D009112 2.1e-14 82.8 136 41.2
Sc19g0007100 Simmondsia chinensis HOM05D007306 ORTHO05D009112 6.6e-13 77.8 86 52.3
Ah.04g152480 Amaranthus hybridus HOM05D007306 ORTHO05D009112 2.8e-11 72.4 166 36.1
THA.LOC104802563 Tarenaya hassleriana HOM05D007306 ORTHO05D009112 6.2e-11 71.2 135 39.3
CDE02G0820 Ceratophyllum demersum HOM05D007306 ORTHO05D009112 1.8e-10 69.7 135 41.5
AUR62015369 Chenopodium quinoa HOM05D007306 ORTHO05D009112 1.8e-10 69.7 156 37.8
CSS0009036 Camellia sinensis var. sinensis HOM05D007306 ORTHO05D009112 3.4e-09 65.5 94 43.6
ATR0807G086 Amborella trichopoda HOM05D007306 ORTHO05D009112 2.2e-08 62.8 133 36.1
EL10Ac3g06917 Beta vulgaris HOM05D007306 ORTHO05D009112 2.9e-08 62.4 175 29.1
Ca_08521_v3 Cicer arietinum L. HOM05D007306 ORTHO05D009112 2.4e-07 59.3 108 43.5
unitig_22.g6026 Utricularia gibba HOM05D007306 ORTHO05D009112 2.4e-07 59.3 124 35.5
Os03g0128300 Oryza sativa ssp. japonica HOM05D007306 ORTHO05D009112 1.2e-06 57.0 149 32.2


User provided reference genes

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