Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0005600 Rhododendron simsii HOM05D005841 ORTHO05D007132 2.4e-204 715.3 364 100.0
vmacro07900 Vaccinium macrocarpon HOM05D005841 ORTHO05D007132 3.7e-189 664.8 364 92.3
CSS0015441 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 8.2e-181 637.1 363 88.4
Actinidia22040 Actinidia chinensis HOM05D005841 ORTHO05D007132 1.9e-169 599.4 349 87.7
Dinv24065 Davidia involucrata HOM05D005841 ORTHO05D007132 6.1e-168 594.3 365 81.9
Dinv14310 Davidia involucrata HOM05D005841 ORTHO05D007132 1.2e-166 590.1 364 82.1
Atru.chr12.1096 Acer truncatum HOM05D005841 ORTHO05D007132 2.2e-157 559.3 363 77.7
Sabra01G0025200 Salix brachista HOM05D005841 ORTHO05D007132 1.3e-154 550.1 361 77.6
Potri.003G189400 Populus trichocarpa HOM05D005841 ORTHO05D007132 2.9e-154 548.9 363 76.9
QL04p022932 Quercus lobata HOM05D005841 ORTHO05D007132 5.0e-154 548.1 403 69.2
Lju124A25T34 Lonicera japonica HOM05D005841 ORTHO05D007132 9.5e-153 543.9 359 78.6
CiPaw.14G011500 Carya illinoinensis HOM05D005841 ORTHO05D007132 1.6e-152 543.1 412 69.7
Potri.001G036400 Populus trichocarpa HOM05D005841 ORTHO05D007132 1.6e-152 543.1 361 75.9
Glyma.04G125600 Glycine max HOM05D005841 ORTHO05D007132 1.0e-151 540.4 359 75.8
Peaxi162Scf00258g00731 Petunia axillaris HOM05D005841 ORTHO05D007132 2.6e-150 535.8 408 68.6
Manes.04G153300 Manihot esculenta HOM05D005841 ORTHO05D007132 7.5e-150 534.3 381 71.7
VMungo1080G1721 Vigna mungo HOM05D005841 ORTHO05D007132 7.5e-150 534.3 359 74.9
Ciclev10001427m.g Citrus clementina HOM05D005841 ORTHO05D007132 2.2e-149 532.7 391 70.3
Glyma.06G313000 Glycine max HOM05D005841 ORTHO05D007132 2.2e-149 532.7 359 74.9
Lj3g0005753 Lotus japonicus HOM05D005841 ORTHO05D007132 2.2e-149 532.7 358 74.9
Phvul.005G012800 Phaseolus vulgaris HOM05D005841 ORTHO05D007132 2.2e-149 532.7 359 74.4
MSTRG.19910 Avicennia marina HOM05D005841 ORTHO05D007132 2.8e-149 532.3 356 74.4
DCAR_019783 Daucus carota HOM05D005841 ORTHO05D007132 8.3e-149 530.8 360 74.7
Nitab4.5_0004458g0010 Nicotiana tabacum HOM05D005841 ORTHO05D007132 1.4e-148 530.0 410 67.6
Lalb_Chr18g0048171 Lupinus albus HOM05D005841 ORTHO05D007132 4.1e-148 528.5 363 73.6
Nitab4.5_0000324g0020 Nicotiana tabacum HOM05D005841 ORTHO05D007132 4.1e-148 528.5 410 67.8
PSO339G0077 Papaver somniferum HOM05D005841 ORTHO05D007132 5.4e-148 528.1 358 73.2
Cc06_g15810 Coffea canephora HOM05D005841 ORTHO05D007132 7.0e-148 527.7 368 72.6
Sabra03G0139600 Salix brachista HOM05D005841 ORTHO05D007132 2.0e-147 526.2 350 75.7
Thecc.10G128400 Theobroma cacao HOM05D005841 ORTHO05D007132 2.0e-147 526.2 362 73.2
Oeu007758.1 Olea europaea HOM05D005841 ORTHO05D007132 4.5e-147 525.0 357 74.2
COL.COLO4_09288 Corchorus olitorius HOM05D005841 ORTHO05D007132 5.9e-147 524.6 362 74.0
PSO384G2928 Papaver somniferum HOM05D005841 ORTHO05D007132 5.9e-147 524.6 358 72.9
Gohir.A06G171000 Gossypium hirsutum HOM05D005841 ORTHO05D007132 5.0e-146 521.5 362 73.5
Medtr3g011510 Medicago truncatula HOM05D005841 ORTHO05D007132 5.0e-146 521.5 359 72.7
Haze_02951 Corylus avellana HOM05D005841 ORTHO05D007132 8.6e-146 520.8 458 61.8
Gohir.D06G178900 Gossypium hirsutum HOM05D005841 ORTHO05D007132 8.6e-146 520.8 362 73.2
Gorai.010G208800 Gossypium raimondii HOM05D005841 ORTHO05D007132 5.6e-145 518.1 362 72.9
Duzib128G0994 Durio zibethinus HOM05D005841 ORTHO05D007132 1.6e-144 516.5 362 73.2
TWI38G1535 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 4.7e-144 515.0 358 73.2
Sc20g0000960 Simmondsia chinensis HOM05D005841 ORTHO05D007132 8.0e-144 514.2 362 71.8
THA.LOC104809184 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 1.5e-142 510.0 361 69.5
arahy.Tifrunner.gnm1.ann1.AX9XXP Arachis hypogaea HOM05D005841 ORTHO05D007132 4.9e-141 505.0 370 70.0
Ca_26913_v3 Cicer arietinum L. HOM05D005841 ORTHO05D007132 6.4e-141 504.6 345 73.0
Lsat_1_v5_gn_5_163601 Lactuca sativa HOM05D005841 ORTHO05D007132 8.3e-141 504.2 407 65.1
THA.LOC104824200 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 1.4e-140 503.4 363 71.1
TPR.G5121 Trifolium pratense HOM05D005841 ORTHO05D007132 1.4e-140 503.4 395 66.3
MSTRG.26082 Avicennia marina HOM05D005841 ORTHO05D007132 2.4e-140 502.7 375 69.3
ECA248G0891 Erigeron canadensis HOM05D005841 ORTHO05D007132 4.1e-140 501.9 415 63.9
TWI15G0221 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 4.1e-140 501.9 364 71.2
Aa31sc488G20 Aethionema arabicum HOM05D005841 ORTHO05D007132 2.3e-138 496.1 356 70.2
GSVIVG01027370001 Vitis vinifera HOM05D005841 ORTHO05D007132 5.0e-138 495.0 367 69.8
unitig_699.g19444 Utricularia gibba HOM05D005841 ORTHO05D007132 3.3e-137 492.3 357 68.6
Eucgr.G03178 Eucalyptus grandis HOM05D005841 ORTHO05D007132 7.3e-137 491.1 406 64.3
Hund07799 Selenicereus undatus HOM05D005841 ORTHO05D007132 2.8e-136 489.2 358 69.6
PGSC0003DMG400023670 Solanum tuberosum HOM05D005841 ORTHO05D007132 4.7e-136 488.4 423 62.9
HanXRQChr13g0390471 Helianthus annuus HOM05D005841 ORTHO05D007132 6.8e-135 484.6 326 73.9
EL10Ac9g20941 Beta vulgaris HOM05D005841 ORTHO05D007132 2.6e-134 482.6 342 70.2
Sopen10g031070 Solanum pennellii HOM05D005841 ORTHO05D007132 4.4e-134 481.9 448 60.0
CANSAT56G0667 Cannabis sativa HOM05D005841 ORTHO05D007132 4.9e-133 478.4 383 64.5
MELO3C011778.2 Cucumis melo HOM05D005841 ORTHO05D007132 1.4e-132 476.9 398 62.8
MBI19_g24060_MAGBIO Magnolia biondii HOM05D005841 ORTHO05D007132 2.4e-132 476.1 410 63.2
Thhalv10010421m.g Eutrema salsugineum HOM05D005841 ORTHO05D007132 3.2e-132 475.7 403 62.5
Ah.07g203740 Amaranthus hybridus HOM05D005841 ORTHO05D007132 5.4e-132 474.9 351 69.5
CsaV3_5G029280 Cucumis sativus L. HOM05D005841 ORTHO05D007132 9.2e-132 474.2 398 63.1
Solyc10g080520.3 Solanum lycopersicum HOM05D005841 ORTHO05D007132 1.2e-131 473.8 399 65.4
arahy.Tifrunner.gnm1.ann1.87YK44 Arachis hypogaea HOM05D005841 ORTHO05D007132 1.7e-130 469.9 374 65.8
AUR62041651 Chenopodium quinoa HOM05D005841 ORTHO05D007132 1.7e-130 469.9 342 68.4
AT3G54360 Arabidopsis thaliana HOM05D005841 ORTHO05D007132 1.9e-129 466.5 394 62.4
BcaB01g00199 Brassica carinata HOM05D005841 ORTHO05D007132 9.5e-129 464.2 377 64.2
Sp5g08040 Schrenkiella parvula HOM05D005841 ORTHO05D007132 9.5e-129 464.2 408 59.8
Sed0011967 Sechium edule HOM05D005841 ORTHO05D007132 9.5e-129 464.2 411 60.8
Aqoxy3G04362 Aquilegia oxysepala HOM05D005841 ORTHO05D007132 1.2e-128 463.8 356 66.3
AL5G35420 Arabidopsis lyrata HOM05D005841 ORTHO05D007132 1.2e-128 463.8 406 60.3
Sed0002293 Sechium edule HOM05D005841 ORTHO05D007132 1.2e-128 463.8 381 63.8
Carub.0005s2096 Capsella rubella HOM05D005841 ORTHO05D007132 6.2e-128 461.5 406 59.6
CARHR164270 Cardamine hirsuta HOM05D005841 ORTHO05D007132 1.4e-127 460.3 398 60.8
BcaB02g07739 Brassica carinata HOM05D005841 ORTHO05D007132 1.8e-127 459.9 323 69.3
A09p47340 Brassica napus HOM05D005841 ORTHO05D007132 6.8e-127 458.0 401 60.1
C08p29570 Brassica napus HOM05D005841 ORTHO05D007132 2.0e-126 456.4 401 59.6
SGA_v2.0_scaffold69G23059 Striga asiatica HOM05D005841 ORTHO05D007132 2.6e-126 456.1 354 67.2
AUR62035532 Chenopodium quinoa HOM05D005841 ORTHO05D007132 4.4e-126 455.3 342 66.7
BolC8t50563H Brassica oleracea HOM05D005841 ORTHO05D007132 7.5e-126 454.5 402 59.5
BraA09t40195Z Brassica rapa HOM05D005841 ORTHO05D007132 2.2e-125 453.0 402 59.5
Psat5g225080 Pisum sativum HOM05D005841 ORTHO05D007132 4.9e-125 451.8 309 73.1
A07p22080 Brassica napus HOM05D005841 ORTHO05D007132 1.9e-124 449.9 394 60.7
BraA07t29891Z Brassica rapa HOM05D005841 ORTHO05D007132 1.9e-124 449.9 394 60.7
MD07G1085200 Malus domestica HOM05D005841 ORTHO05D007132 4.1e-124 448.7 366 65.0
Migut.J01841 Erythranthe guttata HOM05D005841 ORTHO05D007132 9.2e-124 447.6 357 65.3
Prupe.2G051700 Prunus persica HOM05D005841 ORTHO05D007132 3.0e-122 442.6 367 65.1
RcHm_v2.0_Chr1g0330051 Rosa chinensis HOM05D005841 ORTHO05D007132 1.1e-121 440.7 361 65.4
Zm00001eb126920 Zea mays HOM05D005841 ORTHO05D007132 1.1e-121 440.7 337 66.5
Nn2g15922 Nelumbo nucifera HOM05D005841 ORTHO05D007132 4.3e-121 438.7 354 65.3
Os01g0104100 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 2.1e-120 436.4 363 62.3
SEGI_15550 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 2.1e-120 436.4 365 61.1
CDE02G3427 Ceratophyllum demersum HOM05D005841 ORTHO05D007132 6.2e-120 434.9 359 61.8
FvH4_7g04620 Fragaria vesca HOM05D005841 ORTHO05D007132 1.1e-119 434.1 357 65.3
ClCG11G012870 Citrullus lanatus HOM05D005841 ORTHO05D007132 9.9e-118 427.6 397 59.2
FAN06G4202 Fragaria x ananassa HOM05D005841 ORTHO05D007132 4.3e-113 412.1 342 64.3
FAN06G1077 Fragaria x ananassa HOM05D005841 ORTHO05D007132 7.3e-113 411.4 342 64.3
FAN10G3225 Fragaria x ananassa HOM05D005841 ORTHO05D007132 9.6e-113 411.0 363 62.0
FAN01G0675 Fragaria x ananassa HOM05D005841 ORTHO05D007132 8.1e-112 407.9 342 64.0
FAN03G2595 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.1e-111 407.5 342 64.0
BcaC08g44679 Brassica carinata HOM05D005841 ORTHO05D007132 6.9e-111 404.8 363 59.2
C06p22120 Brassica napus HOM05D005841 ORTHO05D007132 8.1e-104 381.3 293 66.2
BolC6t37399H Brassica oleracea HOM05D005841 ORTHO05D007132 8.1e-104 381.3 293 66.2
CSS0023245 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 5.3e-103 378.6 213 87.8
Os02g0795300 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 4.5e-102 375.6 366 56.8
Pp3c4_17260 Physcomitrium patens HOM05D005841 ORTHO05D007132 1.3e-101 374.0 316 58.9
Mapoly0042s0033 Marchantia polymorpha HOM05D005841 ORTHO05D007132 7.4e-97 358.2 363 52.9
Gorai.011G224300 Gossypium raimondii HOM05D005841 ORTHO05D007132 6.4e-93 345.1 270 65.2
AagrBONN_evm.TU.Sc2ySwM_344.2135 Anthoceros agrestis HOM05D005841 ORTHO05D007132 1.9e-89 333.6 367 49.0
SMO194G0025 Selaginella moellendorffii HOM05D005841 ORTHO05D007132 1.0e-85 321.2 316 52.5
AUR62039567 Chenopodium quinoa HOM05D005841 ORTHO05D007132 2.7e-83 313.2 365 51.0
Ah.15g098060 Amaranthus hybridus HOM05D005841 ORTHO05D007132 3.3e-81 306.2 234 66.2
AUR62041645 Chenopodium quinoa HOM05D005841 ORTHO05D007132 4.2e-76 289.3 217 67.3
ATR0068G039 Amborella trichopoda HOM05D005841 ORTHO05D007132 9.7e-73 278.1 216 63.4
CBR_g19049 Chara braunii HOM05D005841 ORTHO05D007132 1.8e-58 230.7 394 35.8
Cpa.g.sc33.143 Carica papaya HOM05D005841 ORTHO05D007132 1.1e-57 228.0 156 75.6
HPP92_001714 Vanilla planifolia HOM05D005841 ORTHO05D007132 2.6e-57 226.9 255 50.6
Hma1.2p1_3953F.1_g338070 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 1.1e-55 221.5 149 75.2
Gohir.D10G200101 Gossypium hirsutum HOM05D005841 ORTHO05D007132 2.2e-53 213.8 150 70.0
FAN03G2434 Fragaria x ananassa HOM05D005841 ORTHO05D007132 5.4e-47 192.6 128 74.2
TAR629G2175 Trochodendron aralioides HOM05D005841 ORTHO05D007132 7.7e-46 188.7 124 76.6
SEGI_12352 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 8.0e-43 178.7 136 63.2
Gohir.D10G200050 Gossypium hirsutum HOM05D005841 ORTHO05D007132 3.1e-39 166.8 115 71.3
Hma1.2p1_3953F.1_g338060 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 1.3e-32 144.8 79 86.1
SEGI_26376 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 1.3e-21 108.2 147 45.6
Lsat_1_v5_gn_1_17940 Lactuca sativa HOM05D005841 ORTHO05D007132 9.5e-20 102.1 73 65.8
ATR0068G030 Amborella trichopoda HOM05D005841 ORTHO05D007132 3.5e-14 83.6 66 65.2
Cre03.g172600 Chlamydomonas reinhardtii HOM05D005841 ORTHO05D007132 1.6e-11 74.7 431 21.3
Psat0s5799g0040 Pisum sativum HOM05D005841 ORTHO05D007132 3.6e-11 73.6 72 52.8
Psat7g004640 Pisum sativum HOM05D000860 ORTHO05D005731 2.0e-09 67.8 52 67.3
TPR.G5122 Trifolium pratense HOM05D003377 ORTHO05D004080 1.7e-08 64.7 76 52.6
FAN06G2188 Fragaria x ananassa HOM05D005841 ORTHO05D007132 6.0e-06 56.2 36 75.0


User provided reference genes

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