Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0256000 Rhododendron simsii HOM05D008080 ORTHO05D010244 2.8e-118 428.7 226 100.0
Actinidia22242 Actinidia chinensis HOM05D008080 ORTHO05D010244 1.0e-43 181.0 229 53.3
CSS0020797 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 9.7e-39 164.5 224 50.4
CSS0035203 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.3e-38 164.1 225 52.0
CSS0025371 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.7e-38 162.5 224 50.0
CSS0037763 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.7e-38 162.5 224 50.0
CSS0040065 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.7e-38 162.5 224 50.0
CSS0004858 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 6.3e-38 161.8 224 49.6
CSS0001168 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.4e-37 159.8 224 49.6
CSS0032680 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.5e-36 157.1 224 48.7
CSS0010108 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.1e-33 146.7 224 47.3
CSS0042852 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.1e-33 146.7 224 47.3
Thecc.03G213000 Theobroma cacao HOM05D008080 ORTHO05D010244 3.3e-31 139.4 159 54.1
DCAR_028394 Daucus carota HOM05D008080 ORTHO05D010244 8.2e-30 134.8 159 50.9
Gohir.A03G078700 Gossypium hirsutum HOM05D008080 ORTHO05D010244 1.4e-29 134.0 161 52.2
QL02p026515 Quercus lobata HOM05D008080 ORTHO05D010244 1.4e-29 134.0 158 51.9
Lj2A146T28 Lonicera japonica HOM05D008080 ORTHO05D010244 1.8e-29 133.7 183 48.1
Gohir.D03G089300 Gossypium hirsutum HOM05D008080 ORTHO05D010244 5.3e-29 132.1 161 52.2
CANSAT21G2269 Cannabis sativa HOM05D008080 ORTHO05D010244 9.1e-29 131.3 153 49.0
CiPaw.11G105600 Carya illinoinensis HOM05D008080 ORTHO05D010244 5.9e-28 128.6 158 50.0
GSVIVG01019727001 Vitis vinifera HOM05D008080 ORTHO05D006305 5.9e-28 128.6 213 43.7
Duzib205G0863 Durio zibethinus HOM05D008080 ORTHO05D010244 7.7e-28 128.3 212 44.3
MD06G1128100 Malus domestica HOM05D008080 ORTHO05D010244 1.3e-27 127.5 159 49.7
MBI04_g15074_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 1.9e-26 123.6 164 46.3
Potri.001G454900 Populus trichocarpa HOM05D008080 ORTHO05D010244 2.5e-26 123.2 156 48.7
Prupe.5G137900 Prunus persica HOM05D008080 ORTHO05D010244 3.2e-26 122.9 221 41.2
Aqoxy5G03619 Aquilegia oxysepala HOM05D008080 ORTHO05D010244 4.2e-26 122.5 157 47.8
PGR031G3362 Punica granatum HOM05D008080 ORTHO05D010244 7.2e-26 121.7 230 41.7
TWI81G0982 Tripterygium wilfordii HOM05D008080 ORTHO05D010244 1.2e-25 120.9 180 43.9
Potri.011G147000 Populus trichocarpa HOM05D008080 ORTHO05D010244 1.6e-25 120.6 159 48.4
Lsat_1_v5_gn_3_13260 Lactuca sativa HOM05D008080 ORTHO05D010244 4.7e-25 119.0 191 43.5
FvH4_5g10080 Fragaria vesca HOM05D008080 ORTHO05D010244 1.8e-24 117.1 159 47.2
FAN18G1060 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.8e-24 117.1 159 47.2
FAN08G1106 Fragaria x ananassa HOM05D008080 ORTHO05D010244 6.7e-24 115.2 159 46.5
CDE09G0306 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 2.0e-23 113.6 157 45.2
RcHm_v2.0_Chr7g0188191 Rosa chinensis HOM05D008080 ORTHO05D010244 2.0e-23 113.6 159 45.3
Sabra16G0307700 Salix brachista HOM05D008080 ORTHO05D010244 5.7e-23 112.1 212 39.2
CDE11G0346 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 6.3e-22 108.6 157 42.7
HanXRQChr17g0534021 Helianthus annuus HOM05D008080 ORTHO05D010244 1.1e-21 107.8 156 42.9
ECA246G2048 Erigeron canadensis HOM05D008080 ORTHO05D010244 4.5e-20 102.4 156 42.9
Os04g0577800 Oryza sativa ssp. japonica HOM05D008080 ORTHO05D010244 4.5e-20 102.4 157 42.7
Zm00001eb073300 Zea mays HOM05D008080 ORTHO05D010244 5.9e-20 102.1 158 43.0
FAN04G0887 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.3e-19 100.9 165 42.4
SMO114G0056 Selaginella moellendorffii HOM05D008080 ORTHO05D010244 1.3e-19 100.9 156 42.3
Aa31LG6G7790 Aethionema arabicum HOM05D008080 ORTHO05D010244 1.7e-19 100.5 151 41.7
CARHR032630 Cardamine hirsuta HOM05D008080 ORTHO05D010244 3.8e-19 99.4 156 40.4
Sp1g28720 Schrenkiella parvula HOM05D008080 ORTHO05D010244 8.5e-19 98.2 225 35.1
Gorai.003G072100 Gossypium raimondii HOM05D008080 ORTHO05D010244 1.1e-18 97.8 137 46.0
THA.LOC104806472 Tarenaya hassleriana HOM05D008080 ORTHO05D010244 1.5e-18 97.4 150 40.7
A09p32970 Brassica napus HOM05D008080 ORTHO05D010244 1.9e-18 97.1 156 39.1
Thhalv10008894m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 1.9e-18 97.1 156 39.1
BcaC08g43879 Brassica carinata HOM05D008080 ORTHO05D010244 3.2e-18 96.3 156 39.1
BolC6t36418H Brassica oleracea HOM05D008080 ORTHO05D010244 3.2e-18 96.3 156 39.1
BraA09t38837Z Brassica rapa HOM05D008080 ORTHO05D010244 3.2e-18 96.3 156 39.1
Carub.0001s3146 Capsella rubella HOM05D008080 ORTHO05D010244 3.2e-18 96.3 156 39.1
Dinv03669 Davidia involucrata HOM05D008080 ORTHO05D010244 3.2e-18 96.3 65 76.9
AL1G47660 Arabidopsis lyrata HOM05D008080 ORTHO05D010244 1.2e-17 94.4 225 33.3
C06p12680 Brassica napus HOM05D008080 ORTHO05D010244 1.2e-17 94.4 156 38.5
AT1G33265 Arabidopsis thaliana HOM05D008080 ORTHO05D010244 2.1e-17 93.6 156 38.5
HPP92_014501 Vanilla planifolia HOM05D008080 ORTHO05D010244 2.1e-17 93.6 214 34.1
Thhalv10008954m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 6.1e-17 92.0 156 38.5
Nn5g27399 Nelumbo nucifera HOM05D008080 ORTHO05D010244 1.0e-16 91.3 180 38.9
BcaB07g32963 Brassica carinata HOM05D008080 ORTHO05D010244 4.0e-16 89.4 205 34.6
Pp3c4_29930 Physcomitrium patens HOM05D008080 ORTHO05D010244 4.0e-16 89.4 199 36.2
Pp3c4_29940 Physcomitrium patens HOM05D008080 ORTHO05D010244 4.0e-16 89.4 199 36.2
MBI04_g47856_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 8.3e-14 81.6 56 69.6
COL.COLO4_20927 Corchorus olitorius HOM05D008080 ORTHO05D010244 4.1e-13 79.3 176 35.2
Cpa.g.sc37.123 Carica papaya HOM05D008080 ORTHO05D010244 7.2e-10 68.6 99 45.5
Eucgr.D02545 Eucalyptus grandis HOM05D008080 ORTHO05D010244 2.1e-09 67.0 52 67.3
CBR_g15957 Chara braunii HOM05D000019 ORTHO05D000002 2.7e-09 66.6 144 31.9
ATR0620G064 Amborella trichopoda HOM05D008080 ORTHO05D010244 4.0e-08 62.8 102 42.2
Sabra11G0132200 Salix brachista HOM05D008080 ORTHO05D010244 6.3e-06 55.5 132 34.1


User provided reference genes

Program Settings