Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0253700 Rhododendron simsii HOM05D008613 ORTHO05D006961 6.3e-35 150.2 75 100.0
vmacro11487 Vaccinium macrocarpon HOM05D008613 ORTHO05D006961 2.5e-15 85.1 97 54.6
Manes.01G055100 Manihot esculenta HOM05D008613 ORTHO05D006961 1.7e-11 72.4 80 48.8
Duzib205G1760 Durio zibethinus HOM05D008613 ORTHO05D006961 2.8e-11 71.6 84 52.4
Actinidia22218 Actinidia chinensis HOM05D008613 ORTHO05D006961 1.4e-10 69.3 87 50.6
Gohir.A02G099100 Gossypium hirsutum HOM05D008613 ORTHO05D006961 1.8e-10 68.9 87 47.1
Gorai.003G077900 Gossypium raimondii HOM05D008613 ORTHO05D006961 1.8e-10 68.9 87 47.1
Manes.01G055000 Manihot esculenta HOM05D008613 ORTHO05D006961 1.8e-10 68.9 80 47.5
Atru.chr9.1866 Acer truncatum HOM05D008613 ORTHO05D006961 2.4e-10 68.6 85 45.9
Gohir.D03G084800 Gossypium hirsutum HOM05D008613 ORTHO05D006961 4.1e-10 67.8 87 46.0
Thecc.03G217500 Theobroma cacao HOM05D008613 ORTHO05D006961 2.0e-09 65.5 87 48.3
Potri.001G450000 Populus trichocarpa HOM05D008613 ORTHO05D006961 3.5e-09 64.7 93 44.1
Potri.001G449800 Populus trichocarpa HOM05D008613 ORTHO05D006961 4.5e-09 64.3 93 44.1
Potri.001G449900 Populus trichocarpa HOM05D008613 ORTHO05D006961 4.5e-09 64.3 93 44.1
Gohir.A08G109100 Gossypium hirsutum HOM05D008613 ORTHO05D006961 5.9e-09 63.9 83 47.0
Sabra16G0303600 Salix brachista HOM05D008613 ORTHO05D006961 1.0e-08 63.2 92 41.3
Prupe.5G133100 Prunus persica HOM05D008613 ORTHO05D006961 1.3e-08 62.8 89 43.8
Sabra16G0303800 Salix brachista HOM05D008613 ORTHO05D006961 1.3e-08 62.8 92 42.4
Cfa011897 Carpinus fangiana HOM05D019613 ORTHO05D006961 2.2e-08 62.0 81 48.1
Sabra16G0303500 Salix brachista HOM05D008613 ORTHO05D006961 2.2e-08 62.0 92 41.3
Sabra16G0303700 Salix brachista HOM05D008613 ORTHO05D006961 3.8e-08 61.2 92 42.4
Sabra16G0303900 Salix brachista HOM05D008613 ORTHO05D006961 3.8e-08 61.2 92 43.5
CiPaw.11G110000 Carya illinoinensis HOM05D008613 ORTHO05D006961 5.0e-08 60.8 92 42.4
Gohir.D08G121900 Gossypium hirsutum HOM05D008613 ORTHO05D006961 5.0e-08 60.8 85 43.5
FvH4_5g10560 Fragaria vesca HOM05D008613 ORTHO05D006961 6.5e-08 60.5 82 45.1
FAN04G2016 Fragaria x ananassa HOM05D008613 ORTHO05D006961 6.5e-08 60.5 82 45.1
FAN08G0050 Fragaria x ananassa HOM05D008613 ORTHO05D006961 6.5e-08 60.5 82 45.1
FAN18G1327 Fragaria x ananassa HOM05D008613 ORTHO05D006961 6.5e-08 60.5 82 45.1
Oeu023688.1 Olea europaea HOM05D008613 ORTHO05D006961 1.1e-07 59.7 79 45.6
Gorai.004G128500 Gossypium raimondii HOM05D008613 ORTHO05D006961 1.5e-07 59.3 85 43.5
THA.LOC104815392 Tarenaya hassleriana HOM05D008703 ORTHO05D006961 1.5e-07 59.3 78 44.9
Cpa.g.sc37.99 Carica papaya HOM05D008613 ORTHO05D006961 3.2e-07 58.2 91 41.8
RcHm_v2.0_Chr7g0187591 Rosa chinensis HOM05D008613 ORTHO05D006961 3.2e-07 58.2 83 43.4
TWI15G0337 Tripterygium wilfordii HOM05D008613 ORTHO05D006961 3.2e-07 58.2 86 41.9
Oeu023687.1 Olea europaea HOM05D008613 ORTHO05D006961 5.5e-07 57.4 86 40.7
Sopen03g022050 Solanum pennellii HOM05D008837 ORTHO05D006961 9.4e-07 56.6 86 41.9
COL.COLO4_10830 Corchorus olitorius HOM05D008613 ORTHO05D006961 1.2e-06 56.2 88 38.6
QL02p027286 Quercus lobata HOM05D008613 ORTHO05D006961 1.2e-06 56.2 97 38.1
CSS0023145 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 2.1e-06 55.5 83 41.0
Haze_09201 Corylus avellana HOM05D019613 ORTHO05D006961 2.7e-06 55.1 86 46.5
AL1G47210 Arabidopsis lyrata HOM05D008703 ORTHO05D006961 4.7e-06 54.3 80 45.0
CSS0022315 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 4.7e-06 54.3 83 39.8
CARHR032250 Cardamine hirsuta HOM05D008703 ORTHO05D006961 4.7e-06 54.3 78 41.0
ClCG01G001400 Citrullus lanatus HOM05D018156 ORTHO05D006961 4.7e-06 54.3 81 45.7
Solyc03g081330.1 Solanum lycopersicum HOM05D008837 ORTHO05D006961 6.1e-06 53.9 88 42.0
Dinv29215 Davidia involucrata HOM05D008837 ORTHO05D006961 8.0e-06 53.5 94 40.4


User provided reference genes

Program Settings