Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 1.2e-138 496.5 251 100.0
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 3.7e-116 421.8 251 84.9
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 2.1e-98 362.8 251 70.9
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 6.6e-97 357.8 253 71.9
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 1.5e-96 356.7 253 71.5
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 7.6e-77 291.2 250 62.8
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 7.1e-75 284.6 238 63.4
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 2.7e-74 282.7 249 61.0
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 3.0e-73 279.3 258 60.5
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 3.0e-73 279.3 240 62.5
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 5.1e-73 278.5 260 57.7
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 6.7e-73 278.1 248 62.1
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 6.7e-73 278.1 235 62.1
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.5e-72 276.9 250 61.2
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 1.9e-72 276.6 253 62.8
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 3.3e-72 275.8 250 59.2
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.6e-71 273.5 235 61.7
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 1.4e-70 270.4 232 63.4
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 2.0e-69 266.5 245 58.8
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 3.4e-69 265.8 249 58.6
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 5.8e-69 265.0 247 58.7
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 7.6e-69 264.6 258 56.2
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 1.7e-68 263.5 208 64.9
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 2.2e-68 263.1 235 60.0
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 2.9e-68 262.7 255 58.8
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 1.4e-67 260.4 213 63.8
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 4.2e-67 258.8 252 60.3
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 1.2e-66 257.3 241 56.8
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 2.7e-66 256.1 281 53.4
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 3.5e-66 255.8 201 64.2
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 4.6e-66 255.4 253 57.3
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 4.6e-66 255.4 248 54.0
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 4.6e-66 255.4 246 56.9
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 7.9e-66 254.6 249 56.2
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 1.8e-65 253.4 255 57.6
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 3.0e-65 252.7 259 56.0
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 3.0e-65 252.7 256 56.2
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 1.1e-64 250.8 247 54.3
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 1.1e-64 250.8 236 58.1
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 2.5e-64 249.6 245 58.8
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 7.4e-64 248.1 255 58.0
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 3.7e-63 245.7 215 58.1
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 1.1e-62 244.2 240 57.9
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.1e-62 244.2 273 51.6
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 1.1e-62 244.2 224 56.7
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 1.4e-62 243.8 205 61.5
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 1.4e-62 243.8 249 54.2
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 2.4e-62 243.0 219 57.1
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 6.9e-62 241.5 238 55.5
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 1.2e-61 240.7 259 56.4
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 2.0e-61 240.0 254 54.7
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 4.5e-61 238.8 210 60.0
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 5.9e-61 238.4 254 53.9
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 7.7e-61 238.0 248 55.2
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 2.2e-60 236.5 285 49.1
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 6.5e-60 235.0 228 56.1
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 1.1e-59 234.2 217 57.6
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 2.5e-59 233.0 255 54.5
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 4.2e-59 232.3 250 53.2
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 4.2e-59 232.3 231 56.3
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 4.2e-59 232.3 235 54.9
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 7.2e-59 231.5 211 61.6
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 3.6e-58 229.2 235 54.9
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 1.8e-57 226.9 194 60.8
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 3.0e-57 226.1 220 59.1
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 8.8e-57 224.6 246 52.4
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 2.5e-56 223.0 233 52.4
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 2.5e-56 223.0 238 53.4
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 2.5e-56 223.0 253 53.4
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 4.3e-56 222.2 208 59.1
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 7.4e-56 221.5 194 62.9
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 1.7e-55 220.3 187 63.1
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 2.2e-55 219.9 245 54.3
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 1.1e-54 217.6 245 53.9
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 1.8e-54 216.9 258 51.2
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 2.4e-54 216.5 250 49.6
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 4.1e-54 215.7 255 49.8
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 5.3e-54 215.3 168 63.7
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 5.3e-54 215.3 168 63.7
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 7.7e-53 211.5 200 60.5
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 2.2e-52 209.9 246 50.8
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 2.9e-52 209.5 240 53.8
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 3.8e-52 209.1 247 48.2
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 8.5e-52 208.0 208 58.7
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 1.1e-51 207.6 188 61.7
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 1.1e-51 207.6 159 67.9
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 4.2e-51 205.7 176 60.2
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 1.2e-50 204.1 202 51.5
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 1.6e-50 203.8 172 62.8
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 1.6e-50 203.8 183 62.8
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 2.1e-50 203.4 195 56.9
CSS0028177 Camellia sinensis var. sinensis HOM05D007016 ORTHO05D008847 2.7e-50 203.0 251 51.4
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 3.6e-50 202.6 179 62.6
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 7.9e-50 201.4 205 57.6
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 2.3e-49 199.9 210 58.6
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 3.9e-49 199.1 192 59.9
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 5.1e-49 198.7 187 59.4
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 5.1e-49 198.7 192 59.9
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 1.5e-48 197.2 190 60.0
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 1.5e-48 197.2 190 60.0
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 4.4e-48 195.7 241 44.8
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 9.7e-48 194.5 254 50.0
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 3.7e-47 192.6 191 58.6
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 3.7e-47 192.6 204 48.0
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 4.8e-47 192.2 214 53.3
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 8.2e-47 191.4 252 47.6
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 8.2e-47 191.4 220 48.2
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 8.2e-47 191.4 214 49.5
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 4.1e-38 162.5 195 50.3
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 7.0e-38 161.8 145 58.6
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 5.9e-37 158.7 216 44.4
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 9.4e-35 151.4 201 42.3
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 1.2e-34 151.0 131 58.0
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 4.0e-33 146.0 143 51.0
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 4.4e-32 142.5 163 50.9
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 9.8e-32 141.4 114 56.1
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 2.4e-30 136.7 102 65.7
CANSAT21G1603 Cannabis sativa HOM05D007016 ORTHO05D008847 4.1e-30 136.0 231 40.7
CBR_g26222 Chara braunii HOM05D007016 ORTHO05D008847 1.1e-27 127.9 166 43.4
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 1.6e-26 124.0 83 72.3
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 1.4e-25 120.9 99 57.6
Hund14199 Selenicereus undatus HOM05D007016 ORTHO05D008847 5.0e-20 102.4 103 53.4
arahy.Tifrunner.gnm1.ann1.HM96ZH Arachis hypogaea HOM05D007016 ORTHO05D008847 1.5e-19 100.9 108 49.1
PSO675G1839 Papaver somniferum HOM05D000047 ORTHO05D000044 7.0e-06 55.5 61 50.8


User provided reference genes

Program Settings