Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0246300 Rhododendron simsii HOM05D000455 ORTHO05D023106 0.0e+00 1350.1 710 100.0
Rhsim02G0246200 Rhododendron simsii HOM05D000455 ORTHO05D023106 5.9e-175 618.6 613 62.2
Rhsim02G0245800 Rhododendron simsii HOM05D000455 ORTHO05D023106 3.1e-152 543.1 760 47.6
Rhsim02G0245600 Rhododendron simsii HOM05D000455 ORTHO05D023106 5.6e-133 479.2 446 67.5
RhsimUnG0007400 Rhododendron simsii HOM05D000455 ORTHO05D000434 2.5e-80 304.3 710 37.5
Rhsim02G0245400 Rhododendron simsii HOM05D000455 ORTHO05D000434 1.1e-75 288.9 210 86.7
Rhsim02G0245700 Rhododendron simsii HOM05D000455 ORTHO05D000434 1.7e-73 281.6 213 85.0
RhsimUnG0078200 Rhododendron simsii HOM05D000455 ORTHO05D023106 4.7e-71 273.5 230 64.3
Rhsim02G0245200 Rhododendron simsii HOM05D000455 ORTHO05D000434 3.6e-63 247.3 741 37.0
RhsimUnG0007500 Rhododendron simsii HOM05D000455 ORTHO05D000434 2.8e-52 211.1 130 82.3
Rhsim02G0250900 Rhododendron simsii HOM05D000455 ORTHO05D000434 1.6e-50 205.3 721 29.5
Rhsim02G0248000 Rhododendron simsii HOM05D000455 ORTHO05D000434 2.7e-50 204.5 213 65.3
Rhsim02G0245300 Rhododendron simsii HOM05D000455 ORTHO05D023106 1.7e-49 201.8 141 75.2
vmacro18354 Vaccinium macrocarpon HOM05D000455 ORTHO05D000434 4.0e-46 190.7 212 62.3
Rhsim02G0247800 Rhododendron simsii HOM05D000455 ORTHO05D000434 2.7e-34 151.4 128 63.3
vmacro11426 Vaccinium macrocarpon HOM05D000455 ORTHO05D000434 3.5e-34 151.0 212 57.5
Rhsim12G0172300 Rhododendron simsii HOM05D000455 ORTHO05D000434 3.8e-33 147.5 122 63.9
RhsimUnG0077500 Rhododendron simsii HOM05D000455 ORTHO05D000434 9.5e-32 142.9 213 42.7
RhsimUnG0077300 Rhododendron simsii HOM05D000455 ORTHO05D000434 1.2e-31 142.5 213 43.2
Rhsim04G0087200 Rhododendron simsii HOM05D000455 ORTHO05D000434 5.8e-29 133.7 220 50.9
RhsimUnG0078300 Rhododendron simsii HOM05D000455 ORTHO05D000434 2.4e-27 128.3 215 40.0
Rhsim02G0246400 Rhododendron simsii HOM05D000455 ORTHO05D000434 1.3e-25 122.5 72 88.9
vmacro11534 Vaccinium macrocarpon HOM05D000455 ORTHO05D000434 1.7e-25 122.1 114 55.3
vmacro22559 Vaccinium macrocarpon HOM05D000455 ORTHO05D000434 2.3e-25 121.7 221 51.1
RhsimUnG0163900 Rhododendron simsii HOM05D000455 ORTHO05D000434 5.6e-24 117.1 127 52.8
RhsimUnG0164000 Rhododendron simsii HOM05D000455 ORTHO05D000434 7.3e-24 116.7 129 52.7
vmacro11342 Vaccinium macrocarpon HOM05D000455 ORTHO05D000434 2.1e-23 115.2 253 36.4
CSS0015680 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 3.1e-22 111.3 211 38.4
CSS0010178 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 2.0e-21 108.6 213 36.6
CSS0018542 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 3.4e-21 107.8 213 37.1
vmacro11541 Vaccinium macrocarpon HOM05D000112 ORTHO05D000564 1.3e-20 105.9 87 64.4
CSS0025475 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.7e-20 105.5 213 36.6
CSS0026143 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 2.2e-20 105.1 213 36.2
RhsimUnG0077800 Rhododendron simsii HOM05D000455 ORTHO05D000434 2.9e-20 104.8 166 41.0
RhsimUnG0164300 Rhododendron simsii HOM05D000455 ORTHO05D000434 1.1e-19 102.8 170 39.4
Rhsim02G0250800 Rhododendron simsii HOM05D000455 ORTHO05D000434 2.4e-19 101.7 99 52.5
CSS0013811 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.2e-18 99.4 213 36.2
CSS0029762 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.6e-18 99.0 210 33.8
RhsimUnG0164200 Rhododendron simsii HOM05D000455 ORTHO05D000434 2.1e-18 98.6 110 47.3
vmacro11529 Vaccinium macrocarpon HOM05D000455 ORTHO05D000434 2.7e-18 98.2 212 34.9
CSS0044995 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 4.6e-18 97.4 210 33.3
CSS0023928 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.5e-16 92.4 218 31.7
CSS0027396 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 2.1e-15 88.6 128 39.8
CSS0047654 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 2.1e-15 88.6 128 39.8
CSS0027820 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 2.8e-15 88.2 237 31.2
Rhsim02G0246100 Rhododendron simsii HOM05D000455 ORTHO05D012328 3.6e-15 87.8 103 48.5
Actinidia22184 Actinidia chinensis HOM05D000455 ORTHO05D000434 8.1e-15 86.7 101 49.5
CSS0008760 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 5.2e-14 84.0 215 33.0
Rhsim05G0142900 Rhododendron simsii HOM05D000455 ORTHO05D000434 1.2e-13 82.8 155 35.5
CSS0015142 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 2.0e-13 82.0 104 41.3
CSS0048685 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 2.0e-13 82.0 212 30.7
CSS0019790 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 3.4e-13 81.3 125 38.4
CSS0024415 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 9.9e-13 79.7 212 30.7
RhsimUnG0078000 Rhododendron simsii HOM05D000455 ORTHO05D000434 2.9e-12 78.2 133 40.6
vmacro11435 Vaccinium macrocarpon HOM05D000455 ORTHO05D426981 2.9e-12 78.2 77 54.5
vmacro11514 Vaccinium macrocarpon HOM05D000455 ORTHO05D000434 6.4e-12 77.0 82 53.7
CSS0044646 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.9e-11 75.5 124 37.9
Dinv11542 Davidia involucrata HOM05D000455 ORTHO05D000434 3.2e-11 74.7 96 42.7
Dinv38771 Davidia involucrata HOM05D000455 ORTHO05D000434 3.2e-11 74.7 121 41.3
Dinv24846 Davidia involucrata HOM05D000455 ORTHO05D000434 7.1e-11 73.6 125 39.2
CSS0025654 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.6e-10 72.4 121 37.2
CSS0009880 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 2.1e-10 72.0 124 37.1
CSS0000650 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 3.5e-10 71.2 121 37.2
Cc00_g29760 Coffea canephora HOM05D000455 ORTHO05D000434 3.5e-10 71.2 127 37.0
Dinv38769 Davidia involucrata HOM05D000455 ORTHO05D000434 3.5e-10 71.2 122 38.5
CSS0038214 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 4.6e-10 70.9 216 28.7
Hma1.2p1_0359F.1_g134990 Hydrangea macrophylla HOM05D000455 ORTHO05D000434 6.0e-10 70.5 117 35.0
Nitab4.5_0000175g0090 Nicotiana tabacum HOM05D000455 ORTHO05D000434 6.0e-10 70.5 91 45.1
Nitab4.5_0003250g0060 Nicotiana tabacum HOM05D000455 ORTHO05D000434 7.8e-10 70.1 91 42.9
Dinv10489 Davidia involucrata HOM05D000455 ORTHO05D000434 1.0e-09 69.7 125 37.6
Hma1.2p1_1095F.1_g256570 Hydrangea macrophylla HOM05D000455 ORTHO05D000434 1.0e-09 69.7 115 35.7
CSS0032249 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.3e-09 69.3 121 36.4
CSS0041013 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.3e-09 69.3 121 38.0
CSS0048530 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.3e-09 69.3 118 37.3
Dinv24847 Davidia involucrata HOM05D000455 ORTHO05D000434 1.3e-09 69.3 105 41.9
Dinv10486 Davidia involucrata HOM05D000455 ORTHO05D000434 2.3e-09 68.6 125 38.4
CSS0040866 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 3.9e-09 67.8 237 30.4
Hma1.2p1_0359F.1_g135000 Hydrangea macrophylla HOM05D000455 ORTHO05D000434 5.1e-09 67.4 114 37.7
CSS0006544 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.1e-08 66.2 123 36.6
CSS0021735 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.5e-08 65.9 211 28.9
Dinv38202 Davidia involucrata HOM05D000455 ORTHO05D000434 1.5e-08 65.9 126 36.5
Dinv38774 Davidia involucrata HOM05D000455 ORTHO05D000434 1.5e-08 65.9 111 40.5
TAR375G0327 Trochodendron aralioides HOM05D000455 ORTHO05D000434 1.5e-08 65.9 120 35.0
CSS0046598 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.9e-08 65.5 125 36.0
DCAR_002189 Daucus carota HOM05D000455 ORTHO05D000434 1.9e-08 65.5 93 39.8
vmacro07310 Vaccinium macrocarpon HOM05D000054 ORTHO05D426916 1.9e-08 65.5 101 34.7
CSS0039323 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 2.5e-08 65.1 211 28.9
Cc11_g02160 Coffea canephora HOM05D000455 ORTHO05D010375 2.5e-08 65.1 125 37.6
Cc06_g21930 Coffea canephora HOM05D000455 ORTHO05D010375 3.3e-08 64.7 125 33.6
Nitab4.5_0007956g0040 Nicotiana tabacum HOM05D000455 ORTHO05D000434 3.3e-08 64.7 91 40.7
Cc06_g21860 Coffea canephora HOM05D000455 ORTHO05D010375 7.3e-08 63.5 126 36.5
CSS0000073 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.6e-07 62.4 95 40.0
Dinv24849 Davidia involucrata HOM05D000455 ORTHO05D000434 2.1e-07 62.0 127 40.2
CSS0010287 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 2.8e-07 61.6 105 35.2
Hma1.2p1_1094F.1_g256500 Hydrangea macrophylla HOM05D000455 ORTHO05D000434 2.8e-07 61.6 84 44.0
CANSAT21G1092 Cannabis sativa HOM05D000455 ORTHO05D000434 3.6e-07 61.2 131 36.6
arahy.Tifrunner.gnm1.ann1.62AJ6F Arachis hypogaea HOM05D000455 ORTHO05D000434 6.2e-07 60.5 120 35.8
COL.COLO4_10745 Corchorus olitorius HOM05D000455 ORTHO05D000434 8.1e-07 60.1 127 32.3
VMungo0464G0631 Vigna mungo HOM05D000455 ORTHO05D000434 8.1e-07 60.1 128 35.9
Migut.E00958 Erythranthe guttata HOM05D000455 ORTHO05D000434 1.1e-06 59.7 63 46.0
arahy.Tifrunner.gnm1.ann1.K1SYDF Arachis hypogaea HOM05D000455 ORTHO05D000434 1.4e-06 59.3 120 35.0
Peaxi162Scf00029g02710 Petunia axillaris HOM05D000455 ORTHO05D011453 1.4e-06 59.3 94 35.1
Sp7g21990 Schrenkiella parvula HOM05D000455 ORTHO05D000434 1.4e-06 59.3 127 35.4
Cc06_g21980 Coffea canephora HOM05D000455 ORTHO05D000434 1.8e-06 58.9 125 34.4
Migut.E01689 Erythranthe guttata HOM05D000455 ORTHO05D012328 1.8e-06 58.9 123 31.7
Nitab4.5_0007956g0050 Nicotiana tabacum HOM05D000455 ORTHO05D000434 1.8e-06 58.9 87 39.1
CARHR231430 Cardamine hirsuta HOM05D000455 ORTHO05D000434 3.1e-06 58.2 127 34.6
Sed0024207 Sechium edule HOM05D000455 ORTHO05D000434 4.0e-06 57.8 140 30.7
TPR.G26977 Trifolium pratense HOM05D000455 ORTHO05D000434 4.0e-06 57.8 107 37.4
TAR629G0003 Trochodendron aralioides HOM05D000455 ORTHO05D000434 4.0e-06 57.8 125 33.6
Ca_10746_v3 Cicer arietinum L. HOM05D000455 ORTHO05D000434 5.2e-06 57.4 86 39.5
Glyma.09G137000 Glycine max HOM05D000455 ORTHO05D000434 5.2e-06 57.4 82 40.2
PGSC0003DMG400013619 Solanum tuberosum HOM05D000455 ORTHO05D011453 5.2e-06 57.4 94 33.0
AL7G29270 Arabidopsis lyrata HOM05D000455 ORTHO05D000434 6.8e-06 57.0 112 38.4
CiPaw.12G080700 Carya illinoinensis HOM05D000455 ORTHO05D000434 6.8e-06 57.0 117 35.0
Cc06_g22000 Coffea canephora HOM05D000455 ORTHO05D000434 6.8e-06 57.0 106 34.9
Cc07_g19820 Coffea canephora HOM05D000455 ORTHO05D000434 6.8e-06 57.0 121 34.7
Lj2g0024646 Lotus japonicus HOM05D000455 ORTHO05D000434 6.8e-06 57.0 125 38.4
Lj5g0025579 Lotus japonicus HOM05D000455 ORTHO05D000434 6.8e-06 57.0 112 32.1
Cc06_g21810 Coffea canephora HOM05D000455 ORTHO05D000434 8.9e-06 56.6 136 30.1
Dinv24844 Davidia involucrata HOM05D000455 ORTHO05D000434 8.9e-06 56.6 106 35.8
Dinv38810 Davidia involucrata HOM05D000455 ORTHO05D000434 8.9e-06 56.6 124 33.1
ECA233G4315 Erigeron canadensis HOM05D000455 ORTHO05D000434 8.9e-06 56.6 127 31.5


User provided reference genes

Program Settings