Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0230200 Rhododendron simsii HOM05D000590 ORTHO05D006825 1.1e-175 619.8 298 100.0
Rhsim01G0172200 Rhododendron simsii HOM05D000590 ORTHO05D006825 6.5e-51 205.3 220 50.0
Actinidia28121 Actinidia chinensis HOM05D000590 ORTHO05D006825 2.5e-50 203.4 223 50.2
Lj7A501T47 Lonicera japonica HOM05D000590 ORTHO05D006825 1.0e-48 198.0 220 46.8
vmacro12678 Vaccinium macrocarpon HOM05D000590 ORTHO05D001713 1.4e-48 197.6 239 46.4
Oeu015362.1 Olea europaea HOM05D000590 ORTHO05D006825 3.7e-46 189.5 222 45.5
Migut.B01870 Erythranthe guttata HOM05D000590 ORTHO05D006825 1.8e-45 187.2 218 45.0
HanXRQChr04g0120221 Helianthus annuus HOM05D000590 ORTHO05D006825 7.0e-45 185.3 221 45.2
SalBow3G4091 Salvia bowleyana HOM05D000590 ORTHO05D006825 2.2e-43 180.3 221 43.9
GSVIVG01027095001 Vitis vinifera HOM05D000590 ORTHO05D006825 1.9e-42 177.2 220 43.2
Lsat_1_v5_gn_7_1240 Lactuca sativa HOM05D000590 ORTHO05D006825 3.2e-42 176.4 219 42.9
Cc02_g39290 Coffea canephora HOM05D000590 ORTHO05D006825 4.2e-42 176.0 220 42.7
AUR62004487 Chenopodium quinoa HOM05D000590 ORTHO05D006825 5.5e-42 175.6 219 42.0
Lj3g0003332 Lotus japonicus HOM05D000590 ORTHO05D006825 1.2e-41 174.5 224 43.3
GSVIVG01027098001 Vitis vinifera HOM05D000590 ORTHO05D006825 1.2e-41 174.5 220 42.7
Ah.05g179600 Amaranthus hybridus HOM05D000590 ORTHO05D006825 1.6e-41 174.1 223 41.3
DCAR_006973 Daucus carota HOM05D000590 ORTHO05D006825 1.6e-41 174.1 249 38.6
SGA_v2.0_scaffold5G03015 Striga asiatica HOM05D000590 ORTHO05D006825 1.6e-41 174.1 216 44.9
EL10Ac1g00275 Beta vulgaris HOM05D000590 ORTHO05D006825 2.7e-41 173.3 218 42.7
AUR62023466 Chenopodium quinoa HOM05D000590 ORTHO05D006825 4.7e-41 172.6 219 41.6
Nitab4.5_0004999g0020 Nicotiana tabacum HOM05D000590 ORTHO05D006825 6.1e-41 172.2 222 41.9
Ciclev10023676m.g Citrus clementina HOM05D000590 ORTHO05D006825 8.0e-41 171.8 220 43.2
Nitab4.5_0000838g0230 Nicotiana tabacum HOM05D000590 ORTHO05D006825 8.0e-41 171.8 222 41.4
RcHm_v2.0_Chr1g0359371 Rosa chinensis HOM05D000590 ORTHO05D006825 8.0e-41 171.8 220 40.9
MD01G1080100 Malus domestica HOM05D000590 ORTHO05D006825 1.0e-40 171.4 257 39.3
Nn2g14772 Nelumbo nucifera HOM05D000590 ORTHO05D006825 1.0e-40 171.4 220 43.2
CAN.G986.8 Capsicum annuum HOM05D000590 ORTHO05D006825 1.4e-40 171.0 231 42.4
Peaxi162Scf00786g00323 Petunia axillaris HOM05D000590 ORTHO05D006825 1.4e-40 171.0 224 42.4
Prupe.2G187500 Prunus persica HOM05D000590 ORTHO05D006825 1.4e-40 171.0 220 42.7
TPR.G15352 Trifolium pratense HOM05D000590 ORTHO05D006825 2.3e-40 170.2 220 41.8
Glyma.16G025000 Glycine max HOM05D000590 ORTHO05D006825 4.0e-40 169.5 220 42.3
Psat4g160760 Pisum sativum HOM05D000590 ORTHO05D006825 5.2e-40 169.1 224 41.5
Solyc01g095870.3 Solanum lycopersicum HOM05D000590 ORTHO05D006825 5.2e-40 169.1 220 42.3
Sopen01g039610 Solanum pennellii HOM05D000590 ORTHO05D006825 5.2e-40 169.1 220 42.3
Phvul.010G113800 Phaseolus vulgaris HOM05D000590 ORTHO05D006825 6.8e-40 168.7 220 42.7
PGR031G1800 Punica granatum HOM05D000590 ORTHO05D006825 6.8e-40 168.7 226 42.5
Medtr8g027735 Medicago truncatula HOM05D000590 ORTHO05D006825 1.2e-39 167.9 221 42.5
CANSAT56G2355 Cannabis sativa HOM05D000590 ORTHO05D006825 3.4e-39 166.4 223 38.6
ATR0602G065 Amborella trichopoda HOM05D000590 ORTHO05D006825 7.5e-39 165.2 236 36.4
CsaV3_6G007130 Cucumis sativus L. HOM05D000590 ORTHO05D006825 7.5e-39 165.2 218 41.3
FAN03G1068 Fragaria x ananassa HOM05D000590 ORTHO05D006825 7.5e-39 165.2 220 39.5
FAN10G3131 Fragaria x ananassa HOM05D000590 ORTHO05D006825 9.8e-39 164.9 220 40.0
Ca_23539_v3 Cicer arietinum L. HOM05D000590 ORTHO05D006825 1.3e-38 164.5 224 42.4
MELO3C022415.2 Cucumis melo HOM05D000590 ORTHO05D006825 2.8e-38 163.3 218 41.3
Dinv35112 Davidia involucrata HOM05D000590 ORTHO05D006825 2.8e-38 163.3 220 43.2
FAN01G2486 Fragaria x ananassa HOM05D000590 ORTHO05D006825 2.8e-38 163.3 220 39.1
FAN06G0495 Fragaria x ananassa HOM05D000590 ORTHO05D006825 2.8e-38 163.3 220 39.1
FAN06G0513 Fragaria x ananassa HOM05D000590 ORTHO05D006825 2.8e-38 163.3 220 39.1
Migut.N01547 Erythranthe guttata HOM05D000590 ORTHO05D006825 3.7e-38 162.9 217 40.1
FAN10G1076 Fragaria x ananassa HOM05D000590 ORTHO05D006825 3.7e-38 162.9 217 39.6
PSO782G3674 Papaver somniferum HOM05D000590 ORTHO05D006825 3.7e-38 162.9 278 35.3
Potri.014G098300 Populus trichocarpa HOM05D000590 ORTHO05D006825 3.7e-38 162.9 220 41.8
Haze_15659 Corylus avellana HOM05D000590 ORTHO05D006825 4.9e-38 162.5 220 40.0
ECA236G1053 Erigeron canadensis HOM05D000590 ORTHO05D001713 4.9e-38 162.5 228 38.2
Cfa003800 Carpinus fangiana HOM05D000590 ORTHO05D001713 6.3e-38 162.2 220 40.0
TWI14G0815 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 3.1e-37 159.8 220 40.0
FvH4_7g16360 Fragaria vesca HOM05D000590 ORTHO05D006825 5.4e-37 159.1 220 39.1
PSO478G0645 Papaver somniferum HOM05D000590 ORTHO05D006825 7.0e-37 158.7 239 37.2
Atru.chr5.661 Acer truncatum HOM05D000590 ORTHO05D006825 1.2e-36 157.9 220 40.5
QL04p061137 Quercus lobata HOM05D000590 ORTHO05D006825 1.2e-36 157.9 237 36.7
TWI59G0780 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 1.6e-36 157.5 220 39.5
Sabra14G0072100 Salix brachista HOM05D000590 ORTHO05D001713 7.7e-36 155.2 237 39.7
AL5G44280 Arabidopsis lyrata HOM05D000590 ORTHO05D006825 1.7e-35 154.1 223 38.1
Sed0003230 Sechium edule HOM05D000590 ORTHO05D006825 5.0e-35 152.5 212 39.6
AT3G61730 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 8.6e-35 151.8 223 37.7
Aa31LG10G15730 Aethionema arabicum HOM05D000590 ORTHO05D001713 1.1e-34 151.4 233 36.5
Aqoxy5G04231 Aquilegia oxysepala HOM05D000590 ORTHO05D006825 4.3e-34 149.4 212 39.2
THA.LOC104817360 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 5.6e-34 149.1 218 39.0
AT5G36000 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 7.3e-34 148.7 223 36.8
CARHR172060 Cardamine hirsuta HOM05D000590 ORTHO05D006825 7.3e-34 148.7 222 36.5
Manes.01G246600 Manihot esculenta HOM05D000590 ORTHO05D006825 7.3e-34 148.7 224 37.9
Duzib133G1228 Durio zibethinus HOM05D000590 ORTHO05D006825 1.2e-33 147.9 219 37.4
THA.LOC104802069 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 2.1e-33 147.1 218 36.7
BraA07t30209Z Brassica rapa HOM05D004730 ORTHO05D005705 2.8e-33 146.7 223 35.9
ClCG06G001200 Citrullus lanatus HOM05D000590 ORTHO05D006825 2.8e-33 146.7 204 40.7
Gohir.A08G034400 Gossypium hirsutum HOM05D000590 ORTHO05D006825 2.8e-33 146.7 220 36.8
Gorai.004G043900 Gossypium raimondii HOM05D000590 ORTHO05D006825 2.8e-33 146.7 219 37.4
BcaB02g08143 Brassica carinata HOM05D000590 ORTHO05D006825 4.7e-33 146.0 219 36.5
BraA04t15812Z Brassica rapa HOM05D000590 ORTHO05D006825 4.7e-33 146.0 220 39.1
Gohir.D08G044900 Gossypium hirsutum HOM05D000590 ORTHO05D006825 4.7e-33 146.0 219 37.0
Duzib138G1692 Durio zibethinus HOM05D000590 ORTHO05D006825 2.3e-32 143.7 223 36.3
BolC6t37952H Brassica oleracea HOM05D000590 ORTHO05D006825 5.2e-32 142.5 223 34.5
Thhalv10006430m.g Eutrema salsugineum HOM05D000590 ORTHO05D006825 1.2e-31 141.4 223 35.9
Oeu004946.1 Olea europaea HOM05D000590 ORTHO05D006825 1.2e-31 141.4 220 37.7
Eucgr.D02371 Eucalyptus grandis HOM05D000590 ORTHO05D006825 2.6e-31 140.2 220 38.2
A07p25690 Brassica napus HOM05D004730 ORTHO05D005705 3.7e-30 136.3 223 34.5
Carub.0005s2847 Capsella rubella HOM05D000590 ORTHO05D006825 1.4e-29 134.4 212 36.3
PGSC0003DMG400000222 Solanum tuberosum HOM05D000590 ORTHO05D006825 1.8e-29 134.0 191 40.3
C06p27910 Brassica napus HOM05D000590 ORTHO05D006825 4.1e-29 132.9 245 32.2
A04p00950 Brassica napus HOM05D000590 ORTHO05D006825 7.0e-29 132.1 243 35.0
C06p27850 Brassica napus HOM05D004730 ORTHO05D006825 7.0e-29 132.1 223 33.2
CiPaw.02G040500 Carya illinoinensis HOM05D000590 ORTHO05D006825 3.5e-28 129.8 217 35.5
SEGI_08329 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 1.3e-27 127.9 213 35.2
Thecc.01G343200 Theobroma cacao HOM05D000590 ORTHO05D006825 1.1e-26 124.8 189 37.0
Os01g0219200 Oryza sativa ssp. japonica HOM05D000590 ORTHO05D006825 1.5e-26 124.4 222 32.4
COL.COLO4_06291 Corchorus olitorius HOM05D000590 ORTHO05D000717 1.8e-24 117.5 219 32.9
HPP92_002828 Vanilla planifolia HOM05D000590 ORTHO05D006825 1.8e-24 117.5 194 36.1
Zm00001eb338700 Zea mays HOM05D000590 ORTHO05D006825 5.2e-24 115.9 197 34.0
BcaB02g08144 Brassica carinata HOM05D000590 ORTHO05D006825 6.8e-24 115.5 171 38.0
MSTRG.17339 Avicennia marina HOM05D000590 ORTHO05D006825 2.6e-23 113.6 138 42.8
MBI06_g08454_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D006825 6.4e-22 109.0 151 37.7
Sp5g01640 Schrenkiella parvula HOM05D000590 ORTHO05D006825 8.3e-22 108.6 223 31.8
AagrBONN_evm.TU.Sc2ySwM_344.2724 Anthoceros agrestis HOM05D000590 ORTHO05D006825 1.1e-21 108.2 220 30.9
VMungo0331G1406 Vigna mungo HOM05D000590 ORTHO05D000717 1.1e-21 108.2 138 42.0
Cpa.g.sc96.9 Carica papaya HOM05D000590 ORTHO05D006825 2.4e-21 107.1 218 33.9
TAR375G0589 Trochodendron aralioides HOM05D000590 ORTHO05D006825 4.1e-21 106.3 107 44.9
Sc26g0000660 Simmondsia chinensis HOM05D000590 ORTHO05D006825 1.2e-20 104.8 142 42.3
Lalb_Chr10g0100491 Lupinus albus HOM05D000590 ORTHO05D006825 3.0e-19 100.1 138 39.9
HanXRQChr09g0243571 Helianthus annuus HOM05D000590 ORTHO05D006825 2.5e-18 97.1 128 41.4
SMO164G0232 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 2.5e-18 97.1 222 29.3
GSVIVG01027114001 Vitis vinifera HOM05D000590 ORTHO05D006825 2.5e-18 97.1 143 39.2
CSS0003243 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 9.5e-18 95.1 115 45.2
Pp3c6_8570 Physcomitrium patens HOM05D000590 ORTHO05D006825 4.7e-17 92.8 212 29.2
Glyma.07G056100 Glycine max HOM05D000590 ORTHO05D006825 1.8e-16 90.9 193 30.1
C04p31120 Brassica napus HOM05D000590 ORTHO05D006825 2.3e-16 90.5 192 30.2
arahy.Tifrunner.gnm1.ann1.AM6JUY Arachis hypogaea HOM05D000590 ORTHO05D006825 8.9e-16 88.6 127 39.4
SMO200G0118 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 2.9e-14 83.6 228 28.5
SMO338G0043 Selaginella moellendorffii HOM05D004142 ORTHO05D005411 2.9e-14 83.6 222 28.8
CSS0016052 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 1.2e-12 78.2 64 57.8
BcaC02g10247 Brassica carinata HOM05D000590 ORTHO05D006825 3.0e-11 73.6 126 34.9
CDE02G2715 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 3.0e-11 73.6 134 32.1
arahy.Tifrunner.gnm1.ann1.0G81PD Arachis hypogaea HOM05D000590 ORTHO05D006825 1.2e-09 68.2 70 47.1
VMungo0331G1881 Vigna mungo HOM05D000590 ORTHO05D006825 1.6e-09 67.8 66 48.5
CDE02G3030 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 3.6e-09 66.6 64 43.8
Lalb_Chr10g0100501 Lupinus albus HOM05D000590 ORTHO05D006825 3.6e-09 66.6 63 50.8
TPR.G3009 Trifolium pratense HOM05D000590 ORTHO05D006825 5.2e-08 62.8 93 37.6
SEGI_01413 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 6.8e-08 62.4 64 45.3
GSVIVG01027101001 Vitis vinifera HOM05D000590 ORTHO05D006825 6.8e-08 62.4 71 43.7
Zm00001eb119810 Zea mays HOM05D000590 ORTHO05D006825 8.9e-08 62.0 69 39.1
AT3G62500 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 2.0e-07 60.8 66 40.9
BolC4t24651H Brassica oleracea HOM05D000590 ORTHO05D006825 5.8e-07 59.3 65 38.5


User provided reference genes

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