Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0201900 Rhododendron simsii HOM05D000117 ORTHO05D004016 1.6e-98 362.8 196 100.0
Actinidia22338 Actinidia chinensis HOM05D000117 ORTHO05D004016 3.8e-23 112.5 191 43.5
Actinidia13229 Actinidia chinensis HOM05D000117 ORTHO05D004016 1.3e-20 104.0 192 42.7
CSS0019988 Camellia sinensis var. sinensis HOM05D000117 ORTHO05D004016 1.5e-19 100.5 160 43.8
Dinv18212 Davidia involucrata HOM05D000117 ORTHO05D004016 4.3e-19 99.0 196 41.8
Dinv30128 Davidia involucrata HOM05D000117 ORTHO05D004016 4.3e-19 99.0 196 41.8
Dinv08637 Davidia involucrata HOM05D000117 ORTHO05D004016 8.2e-18 94.7 198 39.4
Haze_21511 Corylus avellana HOM05D000117 ORTHO05D004016 5.5e-14 82.0 202 36.1
Cfa013139 Carpinus fangiana HOM05D000117 ORTHO05D004016 6.1e-13 78.6 202 37.6
Potri.006G255200 Populus trichocarpa HOM05D000117 ORTHO05D004016 1.0e-12 77.8 204 36.8
Manes.16G122601 Manihot esculenta HOM05D000117 ORTHO05D004016 2.3e-12 76.6 194 36.1
CiPaw.08G010800 Carya illinoinensis HOM05D000117 ORTHO05D004016 3.9e-12 75.9 197 39.6
Sabra18G0029400 Salix brachista HOM05D000117 ORTHO05D017707 5.1e-12 75.5 195 35.9
Duzib168G0601 Durio zibethinus HOM05D000054 ORTHO05D008307 6.7e-12 75.1 196 37.2
QL02p021548 Quercus lobata HOM05D000117 ORTHO05D004016 2.5e-11 73.2 202 36.6
Thecc.09G023900 Theobroma cacao HOM05D000117 ORTHO05D004016 4.8e-10 68.9 201 38.8
Sabra06G0199500 Salix brachista HOM05D000117 ORTHO05D004016 1.1e-09 67.8 201 34.8
Prupe.1G481700 Prunus persica HOM05D000117 ORTHO05D004016 1.4e-09 67.4 196 31.6
Lj1g0003344 Lotus japonicus HOM05D000117 ORTHO05D004016 1.5e-08 63.9 201 37.3
Actinidia38728 Actinidia chinensis HOM05D000117 ORTHO05D004016 2.0e-08 63.5 192 32.8
COL.COLO4_18864 Corchorus olitorius HOM05D000117 ORTHO05D004016 2.6e-08 63.2 196 44.9
Gohir.A05G053500 Gossypium hirsutum HOM05D000117 ORTHO05D004016 4.5e-08 62.4 198 31.8
ClCG05G016850 Citrullus lanatus HOM05D000117 ORTHO05D004016 5.9e-08 62.0 181 31.5
FAN27G0317 Fragaria x ananassa HOM05D000117 ORTHO05D004016 7.7e-08 61.6 203 31.0
RcHm_v2.0_Chr6g0297821 Rosa chinensis HOM05D000117 ORTHO05D004016 1.0e-07 61.2 197 29.9
Nitab4.5_0000209g0290 Nicotiana tabacum HOM05D000117 ORTHO05D004016 1.3e-07 60.8 147 32.7
CiPaw.07G223700 Carya illinoinensis HOM05D000117 ORTHO05D004016 1.7e-07 60.5 206 33.5
Dinv36489 Davidia involucrata HOM05D001124 ORTHO05D001004 2.2e-07 60.1 202 30.2
Dinv41484 Davidia involucrata HOM05D000117 ORTHO05D004016 2.9e-07 59.7 207 33.3
CiPaw.03G247300 Carya illinoinensis HOM05D000117 ORTHO05D004016 3.8e-07 59.3 203 31.0
Actinidia26378 Actinidia chinensis HOM05D000117 ORTHO05D004016 6.5e-07 58.5 194 32.0
TAR636G3132 Trochodendron aralioides HOM05D000117 ORTHO05D004016 6.5e-07 58.5 154 35.7
Gorai.009G058600 Gossypium raimondii HOM05D000117 ORTHO05D004016 8.5e-07 58.2 198 31.3
FAN23G3146 Fragaria x ananassa HOM05D000117 ORTHO05D004016 1.1e-06 57.8 193 33.7
GSVIVG01035866001 Vitis vinifera HOM05D000117 ORTHO05D004016 1.1e-06 57.8 141 34.0
FvH4_2g28970 Fragaria vesca HOM05D000117 ORTHO05D004016 1.9e-06 57.0 203 30.5
FAN15G1324 Fragaria x ananassa HOM05D000117 ORTHO05D004016 1.9e-06 57.0 201 29.9
vmacro06148 Vaccinium macrocarpon HOM05D000117 ORTHO05D004016 1.9e-06 57.0 205 33.2
Cpa.g.c44394 Carica papaya HOM05D000117 ORTHO05D004016 2.5e-06 56.6 211 39.8
Cpa.g.sc217.3 Carica papaya HOM05D000117 ORTHO05D004016 2.5e-06 56.6 211 39.8
FAN24G0168 Fragaria x ananassa HOM05D000054 ORTHO05D008307 2.5e-06 56.6 203 30.5
FAN26G2042 Fragaria x ananassa HOM05D000117 ORTHO05D004016 2.5e-06 56.6 193 38.3
Peaxi162Scf00643g00021 Petunia axillaris HOM05D000117 ORTHO05D004016 4.2e-06 55.8 119 37.0
Migut.E01803 Erythranthe guttata HOM05D000117 ORTHO05D004016 5.5e-06 55.5 119 33.6
VMungo1309G1431 Vigna mungo HOM05D000117 ORTHO05D004016 5.5e-06 55.5 119 36.1
Glyma.04G066300 Glycine max HOM05D000117 ORTHO05D004016 9.4e-06 54.7 143 35.0
Glyma.06G067700 Glycine max HOM05D000117 ORTHO05D004016 9.4e-06 54.7 143 34.3


User provided reference genes

Program Settings