Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0192500 Rhododendron simsii HOM05D008406 ORTHO05D010960 5.7e-272 940.3 458 100.0
Rhsim11G0039100 Rhododendron simsii HOM05D008406 ORTHO05D010960 5.1e-204 714.5 547 68.2
Rhsim01G0161400 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.1e-203 713.4 547 68.2
RhsimUnG0189300 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.1e-203 713.4 547 68.2
Rhsim13G0002100 Rhododendron simsii HOM05D008406 ORTHO05D010960 7.4e-203 710.7 547 68.0
RhsimUnG0190700 Rhododendron simsii HOM05D008406 ORTHO05D010960 9.6e-203 710.3 547 68.0
Rhsim04G0192000 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.8e-188 662.9 477 71.5
Rhsim05G0054300 Rhododendron simsii HOM05D008406 ORTHO05D010960 5.7e-187 657.9 509 68.2
Rhsim06G0074500 Rhododendron simsii HOM05D008406 ORTHO05D010960 2.7e-181 639.0 402 78.4
Rhsim13G0128400 Rhododendron simsii HOM05D008406 ORTHO05D010960 7.2e-174 614.4 384 81.5
Rhsim09G0075400 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.2e-168 597.0 469 67.4
Rhsim06G0114000 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.1e-163 580.5 495 62.6
RhsimUnG0165400 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.1e-163 580.5 525 60.2
Rhsim04G0140000 Rhododendron simsii HOM05D008406 ORTHO05D010960 7.5e-155 551.2 498 60.4
Rhsim01G0093200 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.6e-149 533.5 357 74.8
Rhsim04G0129500 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.8e-135 485.7 461 58.1
Rhsim04G0042900 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.4e-123 446.0 383 62.9
Rhsim04G0229500 Rhododendron simsii HOM05D008406 ORTHO05D010960 5.8e-123 445.3 530 50.0
Rhsim03G0059200 Rhododendron simsii HOM05D008406 ORTHO05D010960 4.3e-118 429.1 321 68.8
Rhsim02G0063100 Rhododendron simsii HOM05D008406 ORTHO05D010960 2.4e-97 360.1 523 44.0
Rhsim03G0108900 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.4e-89 334.3 328 56.4
Rhsim07G0162000 Rhododendron simsii HOM05D008406 ORTHO05D010960 7.1e-89 332.0 464 46.8
RhsimUnG0083200 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.5e-86 324.3 437 47.1
Rhsim05G0097200 Rhododendron simsii HOM05D008406 ORTHO05D010960 4.3e-86 322.8 404 49.5
Rhsim10G0118900 Rhododendron simsii HOM05D008406 ORTHO05D010960 4.8e-85 319.3 324 52.8
RhsimUnG0052300 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.8e-84 317.4 183 84.7
Rhsim12G0097900 Rhododendron simsii HOM05D008406 ORTHO05D010960 2.4e-84 317.0 310 56.8
Rhsim11G0017200 Rhododendron simsii HOM05D008406 ORTHO05D010960 5.8e-83 312.4 526 38.4
Rhsim07G0158000 Rhododendron simsii HOM05D008406 ORTHO05D010960 9.9e-83 311.6 529 41.8
Rhsim04G0047800 Rhododendron simsii HOM05D008406 ORTHO05D010960 4.8e-77 292.7 513 39.8
Rhsim02G0086800 Rhododendron simsii HOM05D008406 ORTHO05D010960 2.6e-75 287.0 346 50.0
RhsimUnG0052400 Rhododendron simsii HOM05D008406 ORTHO05D010960 8.4e-74 282.0 284 53.9
Rhsim10G0121500 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.0e-66 258.5 418 40.7
Rhsim01G0168800 Rhododendron simsii HOM05D008406 ORTHO05D010960 2.5e-62 243.8 419 40.1
Rhsim05G0105000 Rhododendron simsii HOM05D008406 ORTHO05D010960 5.0e-58 229.6 260 49.6
Rhsim06G0145900 Rhododendron simsii HOM05D008406 ORTHO05D010960 2.9e-34 150.6 318 36.8
Rhsim10G0077700 Rhododendron simsii HOM05D008406 ORTHO05D010960 5.5e-33 146.4 190 46.3
Rhsim10G0077600 Rhododendron simsii HOM05D008406 ORTHO05D010960 8.8e-31 139.0 162 50.0
vmacro04996 Vaccinium macrocarpon HOM05D010755 ORTHO05D012899 1.5e-25 121.7 357 29.7
Rhsim05G0118300 Rhododendron simsii HOM05D008406 ORTHO05D010960 2.5e-25 120.9 310 32.3
vmacro21218 Vaccinium macrocarpon HOM05D015585 ORTHO05D010960 7.5e-22 109.4 190 36.3
Rhsim10G0097000 Rhododendron simsii HOM05D008406 ORTHO05D010960 4.1e-20 103.6 184 36.4
Rhsim01G0093300 Rhododendron simsii HOM05D010378 ORTHO05D011279 2.5e-17 94.4 73 65.8
Rhsim06G0074600 Rhododendron simsii HOM05D008406 ORTHO05D339876 2.5e-17 94.4 65 70.8
CSS0007962 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 9.5e-17 92.4 221 29.0
CSS0049581 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 9.5e-17 92.4 178 34.8
CSS0027151 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.2e-16 92.0 178 34.8
CSS0017860 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.6e-16 91.7 221 29.0
CSS0036728 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.6e-16 91.7 226 29.6
CSS0006123 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.1e-16 91.3 226 29.6
CSS0024929 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 2.1e-16 91.3 178 34.8
CSS0001140 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 8.0e-16 89.4 178 34.3
CSS0031881 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 8.0e-16 89.4 175 33.7
CSS0001933 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.0e-15 89.0 226 29.2
CSS0038459 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.0e-15 89.0 180 31.7
CSS0011259 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.4e-15 88.6 147 36.7
CSS0015526 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 3.0e-15 87.4 178 34.3
CSS0017177 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 3.0e-15 87.4 167 34.7
CSS0036793 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 3.0e-15 87.4 175 34.3
CSS0008891 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 4.0e-15 87.0 186 30.1
CSS0030445 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 4.0e-15 87.0 186 30.1
CSS0042845 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 5.2e-15 86.7 161 32.9
Rhsim04G0043000 Rhododendron simsii HOM05D008406 ORTHO05D339498 5.2e-15 86.7 82 54.9
CSS0040911 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 6.8e-15 86.3 147 35.4
CSS0014396 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 8.9e-15 85.9 180 31.1
CSS0003114 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 2.6e-14 84.3 258 27.5
CSS0038054 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 4.4e-14 83.6 160 33.1
Rhsim03G0059300 Rhododendron simsii HOM05D008406 ORTHO05D339582 4.4e-14 83.6 90 51.1
CSS0011457 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 7.5e-14 82.8 150 32.0
CSS0023305 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 9.8e-14 82.4 121 38.0
CSS0038610 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.3e-13 82.0 150 34.0
CSS0012972 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.7e-13 81.6 150 32.7
CSS0012980 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.2e-13 81.3 150 32.7
CSS0007585 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.9e-13 80.9 150 32.7
CSS0042085 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 3.7e-13 80.5 284 28.9
Rhsim03G0109000 Rhododendron simsii HOM05D008406 ORTHO05D010960 6.4e-13 79.7 64 64.1
CSS0007901 Camellia sinensis var. sinensis HOM05D012151 ORTHO05D006018 1.4e-12 78.6 125 35.2
CSS0002865 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.9e-12 78.2 179 31.8
CSS0008845 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.9e-12 78.2 150 32.0
CSS0009479 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.4e-12 77.8 137 31.4
CSS0036149 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 4.1e-12 77.0 169 32.5
CSS0025081 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 5.4e-12 76.6 166 29.5
CSS0010639 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 7.0e-12 76.3 173 32.4
CSS0046219 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 9.2e-12 75.9 163 33.1
CSS0013886 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.6e-11 75.1 138 32.6
CSS0050133 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.6e-11 75.1 157 33.1
CSS0008313 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.0e-11 74.7 180 28.9
CSS0043317 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.0e-11 74.7 166 28.9
CSS0045818 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 3.5e-11 73.9 142 32.4
CSS0006027 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 4.6e-11 73.6 187 27.8
CSS0027497 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 4.6e-11 73.6 187 27.8
CSS0039431 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 6.0e-11 73.2 187 27.3
CSS0015065 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 7.8e-11 72.8 177 32.2
CSS0033407 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 7.8e-11 72.8 143 30.8
CSS0043200 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 7.8e-11 72.8 155 33.5
CSS0003102 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.0e-10 72.4 145 34.5
CSS0022835 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.0e-10 72.4 187 27.3
CSS0044192 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.0e-10 72.4 120 35.8
CSS0017470 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.3e-10 72.0 121 34.7
CSS0019131 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.7e-10 71.6 247 26.3
CSS0045286 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 1.7e-10 71.6 177 31.1
CSS0048857 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.7e-10 71.6 138 31.2
CSS0025994 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 2.3e-10 71.2 246 26.8
CSS0011911 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 3.0e-10 70.9 243 28.8
CSS0032514 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.0e-10 70.9 190 26.3
CSS0043674 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 3.0e-10 70.9 243 28.8
CSS0047062 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.0e-10 70.9 143 32.9
CSS0049321 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.0e-10 70.9 138 31.2
CSS0005466 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.9e-10 70.5 187 27.3
CSS0015189 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 5.0e-10 70.1 135 30.4
CSS0004868 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 8.6e-10 69.3 155 32.9
CSS0031550 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 8.6e-10 69.3 107 36.4
CSS0034030 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 8.6e-10 69.3 152 32.9
CSS0035726 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 8.6e-10 69.3 130 33.8
CSS0028174 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.5e-09 68.6 166 27.1
CSS0047662 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 1.5e-09 68.6 157 32.5
CSS0008810 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.9e-09 68.2 138 30.4
CSS0005159 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.5e-09 67.8 137 33.6
CSS0018688 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.5e-09 67.8 119 34.5
CSS0047382 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.5e-09 67.8 110 33.6
CSS0042004 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.3e-09 67.4 136 30.9
CSS0022859 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 4.3e-09 67.0 148 33.1
CSS0049519 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 5.6e-09 66.6 102 36.3
CSS0045382 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 7.3e-09 66.2 188 27.7
CSS0027236 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 9.5e-09 65.9 150 29.3
CSS0032148 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 9.5e-09 65.9 141 31.2
CSS0035411 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 9.5e-09 65.9 155 32.3
CSS0047058 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 9.5e-09 65.9 119 33.6
QL01p001433 Quercus lobata HOM05D009834 ORTHO05D012892 9.5e-09 65.9 165 30.3
QL01p024136 Quercus lobata HOM05D009834 ORTHO05D012892 9.5e-09 65.9 154 33.1
CSS0025361 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.2e-08 65.5 166 31.9
CSS0034272 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.6e-08 65.1 167 31.1
CSS0041208 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.6e-08 65.1 119 32.8
QL04p095280 Quercus lobata HOM05D009834 ORTHO05D012892 1.6e-08 65.1 157 29.9
CSS0049765 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.1e-08 64.7 107 34.6
QL12p022170 Quercus lobata HOM05D009834 ORTHO05D012892 2.1e-08 64.7 165 30.3
CSS0003457 Camellia sinensis var. sinensis HOM05D000148 ORTHO05D000081 2.8e-08 64.3 96 36.5
CSS0015287 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 2.8e-08 64.3 130 33.1
CSS0022067 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 4.7e-08 63.5 167 31.7
CSS0014310 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 8.0e-08 62.8 155 31.0
CSS0037611 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 8.0e-08 62.8 128 33.6
CSS0046722 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.1e-07 62.4 107 35.5
CSS0037180 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 1.8e-07 61.6 150 31.3
Rhsim02G0046200 Rhododendron simsii HOM05D003552 ORTHO05D006018 1.8e-07 61.6 124 31.5
CSS0037818 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 2.3e-07 61.2 150 30.7
vmacro12924 Vaccinium macrocarpon HOM05D000826 ORTHO05D001831 2.3e-07 61.2 143 35.0
CSS0047926 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 3.1e-07 60.8 250 27.2
CSS0013634 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 5.2e-07 60.1 119 33.6
CSS0043284 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 5.2e-07 60.1 110 33.6
CSS0001155 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 6.8e-07 59.7 107 32.7
CSS0003852 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 6.8e-07 59.7 91 36.3
CSS0011533 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 8.9e-07 59.3 107 35.5
CSS0029299 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 8.9e-07 59.3 129 31.0
CSS0012193 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.5e-06 58.5 119 33.6
CSS0043970 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.5e-06 58.5 114 34.2
CSS0008736 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 2.0e-06 58.2 103 33.0
CSS0017755 Camellia sinensis var. sinensis HOM05D012151 ORTHO05D006018 2.0e-06 58.2 136 27.2
CSS0044977 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 3.4e-06 57.4 110 31.8
Rhsim05G0118400 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.4e-06 57.4 69 47.8
Rhsim06G0088600 Rhododendron simsii HOM05D003552 ORTHO05D006018 3.4e-06 57.4 110 32.7
Atru.chr6.385 Acer truncatum HOM05D000706 ORTHO05D000116 4.4e-06 57.0 162 29.0
Atru.chr6.434_Atru.chr6.435 Acer truncatum HOM05D000706 ORTHO05D001554 4.4e-06 57.0 162 29.0
CSS0048903 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 7.5e-06 56.2 128 31.2
CSS0023354 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 9.8e-06 55.8 125 29.6
CSS0050510 Camellia sinensis var. sinensis HOM05D012151 ORTHO05D006018 9.8e-06 55.8 133 28.6


User provided reference genes

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