Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0192000 Rhododendron simsii HOM05D010927 ORTHO05D010031 6.5e-131 470.7 234 100.0
RhsimUnG0039100 Rhododendron simsii HOM05D010927 ORTHO05D010031 1.5e-79 300.1 227 71.8
Rhsim02G0191800 Rhododendron simsii HOM05D010927 ORTHO05D010031 2.1e-76 289.7 238 68.1
Rhsim02G0191200 Rhododendron simsii HOM05D010927 ORTHO05D010031 5.8e-71 271.6 227 68.7
RhsimUnG0088800 Rhododendron simsii HOM05D010927 ORTHO05D010031 2.8e-65 252.7 231 63.6
Rhsim02G0192200 Rhododendron simsii HOM05D010927 ORTHO05D010031 5.7e-26 122.1 171 45.6
Rhsim02G0190400 Rhododendron simsii HOM05D010927 ORTHO05D010031 7.5e-26 121.7 178 46.1
Rhsim02G0190000 Rhododendron simsii HOM05D010927 ORTHO05D010031 9.4e-21 104.8 187 41.2
RhsimUnG0218700 Rhododendron simsii HOM05D010927 ORTHO05D010031 9.4e-21 104.8 158 42.4
RhsimUnG0071700 Rhododendron simsii HOM05D010927 ORTHO05D010031 3.0e-19 99.8 160 40.6
Ciclev10010677m.g Citrus clementina HOM05D010238 ORTHO05D010031 1.7e-17 94.0 196 34.7
Prupe.1G469500 Prunus persica HOM05D010238 ORTHO05D010031 3.7e-17 92.8 217 27.2
Prupe.1G470100 Prunus persica HOM05D010238 ORTHO05D010031 3.1e-16 89.7 230 27.4
RhsimUnG0204100 Rhododendron simsii HOM05D010927 ORTHO05D010031 3.1e-16 89.7 177 37.9
Prupe.1G469600 Prunus persica HOM05D010238 ORTHO05D010031 9.1e-16 88.2 224 26.3
RhsimUnG0144500 Rhododendron simsii HOM05D010927 ORTHO05D010031 9.1e-16 88.2 177 37.3
Prupe.1G470600 Prunus persica HOM05D010238 ORTHO05D010031 2.0e-15 87.0 228 28.1
Nitab4.5_0003117g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 3.8e-14 82.8 202 27.7
Prupe.1G470400 Prunus persica HOM05D010238 ORTHO05D010031 6.5e-14 82.0 230 26.5
Hma1.2p1_0175F.1_g077090 Hydrangea macrophylla HOM05D010238 ORTHO05D010031 1.1e-13 81.3 195 29.7
Prupe.1G469800 Prunus persica HOM05D010238 ORTHO05D010031 7.2e-13 78.6 252 29.0
Solyc08g067700.1 Solanum lycopersicum HOM05D010238 ORTHO05D010031 3.6e-12 76.3 230 27.8
FAN10G1930 Fragaria x ananassa HOM05D010238 ORTHO05D010031 6.1e-12 75.5 177 29.9
Oeu027789.1 Olea europaea HOM05D010238 ORTHO05D010031 1.4e-11 74.3 189 30.2
FAN06G3436 Fragaria x ananassa HOM05D010238 ORTHO05D010031 2.3e-11 73.6 169 29.0
MD15G1112200 Malus domestica HOM05D010238 ORTHO05D010031 4.4e-10 69.3 110 34.5
QL02p032625 Quercus lobata HOM05D010605 ORTHO05D010031 9.8e-10 68.2 154 33.8
Actinidia13276 Actinidia chinensis HOM05D010238 ORTHO05D010031 1.3e-09 67.8 91 40.7
Dinv37573 Davidia involucrata HOM05D010605 ORTHO05D010031 1.3e-09 67.8 189 27.5
Prupe.1G470500 Prunus persica HOM05D010238 ORTHO05D010031 1.3e-09 67.8 81 40.7
QL02p008501 Quercus lobata HOM05D020907 ORTHO05D010031 1.8e-08 63.9 83 42.2
QL10p010801 Quercus lobata HOM05D020907 ORTHO05D010031 1.8e-08 63.9 155 30.3
Cc06_g13000 Coffea canephora HOM05D010238 ORTHO05D010031 4.1e-08 62.8 176 28.4
TPR.G23939 Trifolium pratense HOM05D010238 ORTHO05D010031 4.1e-08 62.8 81 43.2
TPR.G15657 Trifolium pratense HOM05D000890 ORTHO05D000697 5.4e-08 62.4 88 39.8
MD15G1111300 Malus domestica HOM05D010238 ORTHO05D010031 1.6e-07 60.8 222 23.0
Nitab4.5_0007456g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 1.6e-07 60.8 78 41.0
Dinv08500 Davidia involucrata HOM05D010605 ORTHO05D010031 2.0e-07 60.5 157 29.3
Actinidia28329 Actinidia chinensis HOM05D010605 ORTHO05D010031 2.7e-07 60.1 79 43.0
Haze_08723 Corylus avellana HOM05D010605 ORTHO05D010031 3.5e-07 59.7 186 24.7
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 3.5e-07 59.7 63 49.2
Haze_08725 Corylus avellana HOM05D010605 ORTHO05D010031 4.5e-07 59.3 196 25.0
Nitab4.5_0000125g0370 Nicotiana tabacum HOM05D010238 ORTHO05D010031 1.3e-06 57.8 78 37.2
Cfa012265 Carpinus fangiana HOM05D010605 ORTHO05D010031 6.6e-06 55.5 82 36.6
Rhsim02G0189800 Rhododendron simsii HOM05D010927 ORTHO05D010031 8.6e-06 55.1 59 50.8


User provided reference genes

Program Settings