Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0191900 Rhododendron simsii HOM05D038019 ORTHO05D002169 6.7e-90 334.0 164 100.0
Rhsim12G0084600 Rhododendron simsii HOM05D038019 ORTHO05D339738 1.4e-18 97.1 56 89.3
Rhsim06G0029100 Rhododendron simsii HOM05D002183 ORTHO05D002169 3.0e-13 79.3 43 88.4
vmacro21676 Vaccinium macrocarpon HOM05D002183 ORTHO05D002169 2.4e-10 69.7 43 76.7
Sc15g0007100 Simmondsia chinensis HOM05D002183 ORTHO05D002169 8.4e-08 61.2 43 67.4
Cpa.g.sc99.33 Carica papaya HOM05D002183 ORTHO05D002169 1.9e-07 60.1 55 56.4
Lj5g0023942 Lotus japonicus HOM05D002183 ORTHO05D002169 2.4e-07 59.7 43 62.8
Ah.05g176900 Amaranthus hybridus HOM05D002183 ORTHO05D002169 5.4e-07 58.5 56 53.6
Phvul.001G012000 Phaseolus vulgaris HOM05D002183 ORTHO05D002169 5.4e-07 58.5 43 60.5
DCAR_022462 Daucus carota HOM05D002183 ORTHO05D002169 7.1e-07 58.2 46 63.0
Lj1g0001454 Lotus japonicus HOM05D002183 ORTHO05D002169 9.3e-07 57.8 43 60.5
PGR083G2726 Punica granatum HOM05D002183 ORTHO05D002169 1.2e-06 57.4 58 53.4
BcaNung07252 Brassica carinata HOM05D002183 ORTHO05D002169 2.1e-06 56.6 57 49.1
CiPaw.07G158000 Carya illinoinensis HOM05D002183 ORTHO05D002169 2.1e-06 56.6 58 51.7
CANSAT25G2082 Cannabis sativa HOM05D002183 ORTHO05D002169 2.7e-06 56.2 43 62.8
AUR62014491 Chenopodium quinoa HOM05D002183 ORTHO05D002169 3.5e-06 55.8 43 60.5
AUR62038047 Chenopodium quinoa HOM05D002183 ORTHO05D002169 3.5e-06 55.8 43 60.5
THA.LOC104809241 Tarenaya hassleriana HOM05D002183 ORTHO05D002169 3.5e-06 55.8 55 50.9
arahy.Tifrunner.gnm1.ann1.3FQ6RN Arachis hypogaea HOM05D002183 ORTHO05D002169 4.6e-06 55.5 64 46.9
arahy.Tifrunner.gnm1.ann1.C9WYXW Arachis hypogaea HOM05D002183 ORTHO05D002169 4.6e-06 55.5 43 58.1
TPR.G14413 Trifolium pratense HOM05D002183 ORTHO05D002169 4.6e-06 55.5 46 60.9
ECA246G2632 Erigeron canadensis HOM05D002183 ORTHO05D002169 6.0e-06 55.1 43 60.5
ECA247G3675 Erigeron canadensis HOM05D002183 ORTHO05D002169 6.0e-06 55.1 43 60.5
Lj4A789G52 Lonicera japonica HOM05D002183 ORTHO05D002169 6.0e-06 55.1 43 60.5
Prupe.1G375100 Prunus persica HOM05D002183 ORTHO05D002169 6.0e-06 55.1 58 51.7
TWI12G1188 Tripterygium wilfordii HOM05D002183 ORTHO05D002169 6.0e-06 55.1 55 52.7
Glyma.14G071700 Glycine max HOM05D002183 ORTHO05D002169 7.8e-06 54.7 43 60.5


User provided reference genes

Program Settings