Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0190700 Rhododendron simsii HOM05D003875 ORTHO05D004240 4.5e-67 257.7 122 100.0
RhsimUnG0038500 Rhododendron simsii HOM05D003875 ORTHO05D004240 1.3e-58 229.6 111 98.2
Rhsim02G0189500 Rhododendron simsii HOM05D003875 ORTHO05D004240 2.0e-51 205.7 110 87.3
RhsimUnG0218800 Rhododendron simsii HOM05D003875 ORTHO05D004240 4.7e-48 194.5 115 80.0
Rhsim02G0191700 Rhododendron simsii HOM05D003875 ORTHO05D004240 2.7e-27 125.6 84 76.2
Actinidia13268 Actinidia chinensis HOM05D003875 ORTHO05D004240 2.1e-24 115.9 111 51.4
Ciclev10008314m.g Citrus clementina HOM05D003875 ORTHO05D004240 3.6e-24 115.2 117 49.6
Prupe.1G471500 Prunus persica HOM05D003875 ORTHO05D004240 4.4e-22 108.2 114 50.0
Atru.chr7.2231 Acer truncatum HOM05D003875 ORTHO05D004240 5.8e-22 107.8 112 49.1
Atru.chr7.2352 Acer truncatum HOM05D003875 ORTHO05D004240 5.8e-22 107.8 112 49.1
Atru.chr7.2228 Acer truncatum HOM05D003875 ORTHO05D004240 1.3e-21 106.7 112 48.2
Atru.chr7.2348 Acer truncatum HOM05D003875 ORTHO05D004240 1.3e-21 106.7 112 48.2
TWI34G0133 Tripterygium wilfordii HOM05D003875 ORTHO05D004240 1.3e-21 106.7 111 50.5
Phvul.001G054300 Phaseolus vulgaris HOM05D003875 ORTHO05D004240 1.7e-21 106.3 112 46.4
QL12p024553 Quercus lobata HOM05D003875 ORTHO05D004240 8.4e-21 104.0 111 47.7
Dinv11597 Davidia involucrata HOM05D003875 ORTHO05D004240 2.4e-20 102.4 114 47.4
MD08G1141600 Malus domestica HOM05D003875 ORTHO05D004240 2.4e-20 102.4 111 51.4
VMungo0647G0068 Vigna mungo HOM05D003875 ORTHO05D004240 7.1e-20 100.9 112 45.5
arahy.Tifrunner.gnm1.ann1.3Z1QL9 Arachis hypogaea HOM05D003875 ORTHO05D004240 1.6e-19 99.8 112 47.3
Sabra18G0033500 Salix brachista HOM05D003875 ORTHO05D004240 1.6e-19 99.8 114 44.7
arahy.Tifrunner.gnm1.ann1.R0TJM1 Arachis hypogaea HOM05D003875 ORTHO05D004240 2.1e-19 99.4 112 49.1
Cfa013196 Carpinus fangiana HOM05D003491 ORTHO05D004293 2.1e-19 99.4 117 43.6
Haze_21599 Corylus avellana HOM05D003875 ORTHO05D004240 4.6e-19 98.2 117 42.7
FvH4_2g29810 Fragaria vesca HOM05D003875 ORTHO05D004240 4.6e-19 98.2 110 50.0
Lalb_Chr04g0257471 Lupinus albus HOM05D003875 ORTHO05D004240 6.0e-19 97.8 112 44.6
Oeu030072.1 Olea europaea HOM05D003875 ORTHO05D004240 1.0e-18 97.1 112 47.3
Potri.018G032700 Populus trichocarpa HOM05D003875 ORTHO05D004240 2.3e-18 95.9 111 45.9
Cc11_g01490 Coffea canephora HOM05D003875 ORTHO05D004240 3.9e-18 95.1 114 45.6
CiPaw.08G014300 Carya illinoinensis HOM05D003875 ORTHO05D004240 5.1e-18 94.7 111 46.8
Lj4g0004496 Lotus japonicus HOM05D003875 ORTHO05D004240 1.1e-17 93.6 113 42.5
GSVIVG01035782001 Vitis vinifera HOM05D003875 ORTHO05D004240 1.5e-17 93.2 112 46.4
Sc23g0006970 Simmondsia chinensis HOM05D003875 ORTHO05D004240 3.3e-17 92.0 114 41.2
PGR044G0870 Punica granatum HOM05D003875 ORTHO05D004240 4.3e-17 91.7 108 41.7
Duzib168G0377 Durio zibethinus HOM05D003875 ORTHO05D004240 5.6e-17 91.3 112 44.6
RcHm_v2.0_Chr6g0298841 Rosa chinensis HOM05D003875 ORTHO05D004240 5.6e-17 91.3 106 49.1
TPR.G15662 Trifolium pratense HOM05D003875 ORTHO05D004240 7.3e-17 90.9 115 40.9
Aqoxy7G01948 Aquilegia oxysepala HOM05D003875 ORTHO05D004240 1.6e-16 89.7 119 43.7
Cpa.g.sc55.105 Carica papaya HOM05D003875 ORTHO05D004240 3.6e-16 88.6 118 42.4
Manes.03G018500 Manihot esculenta HOM05D003875 ORTHO05D004240 3.6e-16 88.6 111 44.1
Ca_12920_v3 Cicer arietinum L. HOM05D003875 ORTHO05D004240 4.8e-16 88.2 113 39.8
Migut.A00291 Erythranthe guttata HOM05D003875 ORTHO05D004240 8.1e-16 87.4 118 40.7
Thecc.09G147200 Theobroma cacao HOM05D003875 ORTHO05D004240 8.1e-16 87.4 118 41.5
Glyma.17G206400 Glycine max HOM05D003875 ORTHO05D004240 2.4e-15 85.9 112 38.4
CANSAT64G0144 Cannabis sativa HOM05D003875 ORTHO05D004240 9.0e-15 84.0 111 37.8
MBI01_g15494_MAGBIO Magnolia biondii HOM05D003875 ORTHO05D004240 1.5e-14 83.2 121 38.8
FAN24G0947 Fragaria x ananassa HOM05D003875 ORTHO05D004240 2.6e-14 82.4 94 48.9
AUR62032357 Chenopodium quinoa HOM05D003875 ORTHO05D004240 3.4e-14 82.0 111 40.5
Medtr1g011660 Medicago truncatula HOM05D003875 ORTHO05D004240 4.5e-14 81.6 113 39.8
PSO170G4839 Papaver somniferum HOM05D003875 ORTHO05D004240 4.5e-14 81.6 114 40.4
Psat6g030240 Pisum sativum HOM05D003875 ORTHO05D004240 4.5e-14 81.6 115 37.4
Eucgr.C02832 Eucalyptus grandis HOM05D003875 ORTHO05D004240 2.2e-13 79.3 109 37.6
AUR62041852 Chenopodium quinoa HOM05D003875 ORTHO05D004240 1.1e-12 77.0 111 36.9
Thhalv10025128m.g Eutrema salsugineum HOM05D003875 ORTHO05D004240 1.6e-11 73.2 116 37.1
EL10Ac2g02560 Beta vulgaris HOM05D003875 ORTHO05D004240 2.7e-11 72.4 112 35.7
FAN15G3748 Fragaria x ananassa HOM05D003875 ORTHO05D004240 3.5e-11 72.0 91 46.2
Ah.12g063710 Amaranthus hybridus HOM05D003875 ORTHO05D004240 4.6e-11 71.6 109 36.7
MSTRG.11749 Avicennia marina HOM05D003875 ORTHO05D004240 4.6e-11 71.6 82 43.9
Rhsim02G0190300 Rhododendron simsii HOM05D003875 ORTHO05D004240 7.9e-11 70.9 46 71.7
AL7G23210 Arabidopsis lyrata HOM05D003875 ORTHO05D004240 1.3e-10 70.1 114 36.0
AT4G29250 Arabidopsis thaliana HOM05D003875 ORTHO05D004240 1.8e-10 69.7 114 36.0
CARHR240470 Cardamine hirsuta HOM05D003875 ORTHO05D004240 8.7e-10 67.4 115 36.5
BcaC09g52043 Brassica carinata HOM05D003875 ORTHO05D004240 1.5e-09 66.6 116 33.6
Aa31sc251G50 Aethionema arabicum HOM05D003875 ORTHO05D004240 2.5e-09 65.9 108 34.3
DCAR_007686 Daucus carota HOM05D003875 ORTHO05D004240 3.3e-09 65.5 74 47.3
Sp7g30310 Schrenkiella parvula HOM05D003875 ORTHO05D004240 4.3e-09 65.1 118 33.1
Carub.0007s1135 Capsella rubella HOM05D003875 ORTHO05D004240 7.4e-09 64.3 115 33.9
BolC1t00642H Brassica oleracea HOM05D003875 ORTHO05D004240 2.8e-08 62.4 111 31.5
C01p06480 Brassica napus HOM05D003875 ORTHO05D004240 3.7e-08 62.0 116 32.8
PSO017G0824 Papaver somniferum HOM05D003875 ORTHO05D004240 6.2e-08 61.2 83 42.2
COL.COLO4_24012 Corchorus olitorius HOM05D003875 ORTHO05D004240 1.1e-07 60.5 81 35.8
THA.LOC104803631 Tarenaya hassleriana HOM05D003875 ORTHO05D004240 2.4e-07 59.3 116 31.9
A01p05860 Brassica napus HOM05D003875 ORTHO05D004240 4.0e-07 58.5 117 30.8
ATR0083G032 Amborella trichopoda HOM05D003875 ORTHO05D004240 1.2e-06 57.0 121 28.1
FAN27G3504 Fragaria x ananassa HOM05D003875 ORTHO05D004240 1.2e-06 57.0 58 51.7


User provided reference genes

Program Settings