Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0182300 Rhododendron simsii HOM05D003689 ORTHO05D003950 6.0e-177 625.2 674 100.0
Ca_17333_v3 Cicer arietinum L. HOM05D003689 ORTHO05D003950 1.6e-20 105.5 103 52.4
Medtr8g103480 Medicago truncatula HOM05D003689 ORTHO05D003950 1.1e-16 92.8 89 53.9
Carub.0006s1949 Capsella rubella HOM05D000055 ORTHO05D003950 1.8e-16 92.0 79 58.2
AL6G32800 Arabidopsis lyrata HOM05D000055 ORTHO05D003950 5.3e-16 90.5 78 59.0
AT5G21222 Arabidopsis thaliana HOM05D000055 ORTHO05D003950 5.3e-16 90.5 78 59.0
CARHR191690 Cardamine hirsuta HOM05D000055 ORTHO05D003950 6.9e-16 90.1 79 57.0
Thhalv10012659m.g Eutrema salsugineum HOM05D000055 ORTHO05D003950 1.2e-15 89.4 79 57.0
Sp6g23340 Schrenkiella parvula HOM05D000055 ORTHO05D003950 1.2e-15 89.4 78 57.7
A10p18880 Brassica napus HOM05D000055 ORTHO05D003950 4.5e-15 87.4 77 57.1
C09p54880 Brassica napus HOM05D000055 ORTHO05D003950 4.5e-15 87.4 77 57.1
BolC9t58349H Brassica oleracea HOM05D000055 ORTHO05D003950 4.5e-15 87.4 77 57.1
BraA10t43967Z Brassica rapa HOM05D000055 ORTHO05D003950 4.5e-15 87.4 77 57.1
Thhalv10003915m.g Eutrema salsugineum HOM05D003689 ORTHO05D003950 1.7e-14 85.5 111 39.6
BcaC04g23586 Brassica carinata HOM05D003689 ORTHO05D003950 3.8e-14 84.3 96 42.7
COL.COLO4_18698 Corchorus olitorius HOM05D003689 ORTHO05D003950 5.0e-14 84.0 73 56.2
Aa31LG1G13560 Aethionema arabicum HOM05D000055 ORTHO05D003950 6.5e-14 83.6 88 50.0
Carub.0006s2350 Capsella rubella HOM05D003689 ORTHO05D003950 6.5e-14 83.6 129 36.4
AL6G37510 Arabidopsis lyrata HOM05D003689 ORTHO05D003950 8.5e-14 83.2 129 35.7
A09p06120 Brassica napus HOM05D003689 ORTHO05D003950 1.1e-13 82.8 96 42.7
Sp2g21900 Schrenkiella parvula HOM05D003689 ORTHO05D003950 1.1e-13 82.8 111 40.5
AT5G25630 Arabidopsis thaliana HOM05D003689 ORTHO05D003950 2.5e-13 81.6 114 36.8
BcaB04g19771 Brassica carinata HOM05D003689 ORTHO05D003950 3.2e-13 81.3 109 40.4
BraA09t36253Z Brassica rapa HOM05D003689 ORTHO05D003950 3.2e-13 81.3 96 41.7
Zm00001eb315460 Zea mays HOM05D003689 ORTHO05D003950 5.5e-13 80.5 92 48.9
C09p06740 Brassica napus HOM05D003689 ORTHO05D003950 7.2e-13 80.1 96 41.7
BolC9t53595H Brassica oleracea HOM05D003689 ORTHO05D003950 7.2e-13 80.1 96 41.7
Os01g0228400 Oryza sativa ssp. japonica HOM05D003689 ORTHO05D003950 9.4e-13 79.7 85 50.6
FAN23G2461 Fragaria x ananassa HOM05D003689 ORTHO05D003950 3.6e-12 77.8 66 53.0
CARHR187690 Cardamine hirsuta HOM05D003689 ORTHO05D003950 4.6e-12 77.4 109 38.5
THA.LOC104799204 Tarenaya hassleriana HOM05D003689 ORTHO05D003950 4.6e-12 77.4 102 39.2
Actinidia31220 Actinidia chinensis HOM05D003689 ORTHO05D003950 1.5e-10 72.4 130 36.9
ECA234G0433 Erigeron canadensis HOM05D003689 ORTHO05D003950 9.7e-10 69.7 99 38.4
Migut.J01154 Erythranthe guttata HOM05D003689 ORTHO05D003950 1.3e-09 69.3 61 52.5
Hma1.2p1_0140F.1_g063530 Hydrangea macrophylla HOM05D003689 ORTHO05D003950 4.1e-08 64.3 107 39.3
Psat7g013440 Pisum sativum HOM05D003689 ORTHO05D003950 6.9e-08 63.5 51 54.9
Nn7g35992 Nelumbo nucifera HOM05D003689 ORTHO05D003950 9.1e-08 63.2 82 46.3
Nn8g39148 Nelumbo nucifera HOM05D003689 ORTHO05D003950 9.1e-08 63.2 82 46.3
Lj8A603G55 Lonicera japonica HOM05D003689 ORTHO05D003950 1.2e-07 62.8 129 33.3
Lj8C603T16 Lonicera japonica HOM05D003689 ORTHO05D003950 1.5e-07 62.4 119 35.3
MBI04_g43860_MAGBIO Magnolia biondii HOM05D003689 ORTHO05D003950 2.0e-07 62.0 53 56.6
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 2.0e-07 62.0 77 42.9
Peaxi162Scf00523g00624 Petunia axillaris HOM05D003689 ORTHO05D003950 1.0e-06 59.7 137 29.2
Sabra06G0189700 Salix brachista HOM05D003689 ORTHO05D003950 1.3e-06 59.3 113 38.1
Sed0002455 Sechium edule HOM05D003689 ORTHO05D003950 1.7e-06 58.9 77 44.2
TAR624G0021 Trochodendron aralioides HOM05D003689 ORTHO05D003950 8.5e-06 56.6 69 46.4


User provided reference genes

Program Settings