Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0172300 Rhododendron simsii HOM05D006511 ORTHO05D007567 4.6e-147 524.6 280 100.0
Actinidia29367 Actinidia chinensis HOM05D006511 ORTHO05D007567 6.1e-91 338.2 270 72.2
CSS0025861 Camellia sinensis var. sinensis HOM05D006511 ORTHO05D007567 2.5e-89 332.8 271 69.4
Dinv22148 Davidia involucrata HOM05D006511 ORTHO05D007567 8.8e-82 307.8 271 63.5
Potri.013G095400 Populus trichocarpa HOM05D006511 ORTHO05D007567 2.0e-70 270.0 270 55.2
QL09p001374 Quercus lobata HOM05D006511 ORTHO05D007567 3.2e-68 262.7 272 54.8
TWI12G0802 Tripterygium wilfordii HOM05D006511 ORTHO05D007567 5.5e-68 261.9 280 53.9
Sabra13G0081400 Salix brachista HOM05D006511 ORTHO05D007567 3.6e-67 259.2 270 54.1
CiPaw.03G012800 Carya illinoinensis HOM05D006511 ORTHO05D007567 2.3e-66 256.5 270 54.8
RcHm_v2.0_Chr6g0249621 Rosa chinensis HOM05D006511 ORTHO05D007567 4.0e-66 255.8 272 52.9
Thecc.08G168400 Theobroma cacao HOM05D006511 ORTHO05D007567 8.8e-66 254.6 273 51.6
FvH4_2g00330 Fragaria vesca HOM05D006511 ORTHO05D007567 4.4e-65 252.3 272 54.8
Prupe.8G003600 Prunus persica HOM05D006511 ORTHO05D007567 5.7e-65 251.9 274 53.6
FAN19G0686 Fragaria x ananassa HOM05D006511 ORTHO05D007567 7.5e-65 251.5 272 54.0
FAN24G0692 Fragaria x ananassa HOM05D006511 ORTHO05D007567 1.7e-64 250.4 272 54.8
TAR636G2957 Trochodendron aralioides HOM05D006511 ORTHO05D007567 1.7e-64 250.4 269 54.6
MD05G1006300 Malus domestica HOM05D006511 ORTHO05D007567 8.3e-64 248.1 263 55.1
Manes.18G109250 Manihot esculenta HOM05D006511 ORTHO05D007567 4.1e-63 245.7 270 53.7
FAN20G0885 Fragaria x ananassa HOM05D006511 ORTHO05D007567 8.5e-61 238.0 280 51.1
PSO384G4286 Papaver somniferum HOM05D006511 ORTHO05D007567 1.5e-60 237.3 269 50.9
THA.LOC104815798 Tarenaya hassleriana HOM05D006511 ORTHO05D007567 2.5e-60 236.5 275 51.3
Nn5g27238 Nelumbo nucifera HOM05D006511 ORTHO05D007567 3.2e-60 236.1 277 48.7
Hund17299 Selenicereus undatus HOM05D006511 ORTHO05D007567 2.7e-59 233.0 270 51.1
HanXRQChr04g0102481 Helianthus annuus HOM05D006511 ORTHO05D007567 4.7e-59 232.3 269 49.8
Sed0008597 Sechium edule HOM05D006511 ORTHO05D007567 1.5e-57 227.3 270 51.1
CANSAT56G0749 Cannabis sativa HOM05D006511 ORTHO05D007567 3.4e-57 226.1 270 52.2
Lsat_1_v5_gn_1_24541 Lactuca sativa HOM05D006511 ORTHO05D007567 5.7e-57 225.3 269 48.0
BolC5t32531H Brassica oleracea HOM05D006511 ORTHO05D007567 1.3e-56 224.2 274 49.3
C05p38000 Brassica napus HOM05D006511 ORTHO05D007567 2.8e-56 223.0 274 49.3
Glyma.12G241400 Glycine max HOM05D006511 ORTHO05D007567 2.8e-56 223.0 278 47.5
Phvul.011G215700 Phaseolus vulgaris HOM05D006511 ORTHO05D007567 6.3e-56 221.9 270 47.8
HanXRQChr04g0102471 Helianthus annuus HOM05D006511 ORTHO05D007567 8.3e-56 221.5 262 48.9
CARHR032940 Cardamine hirsuta HOM05D006511 ORTHO05D007567 1.4e-55 220.7 269 49.4
BcaB03g13696 Brassica carinata HOM05D006511 ORTHO05D007567 1.8e-55 220.3 269 48.7
BcaC05g27802 Brassica carinata HOM05D006511 ORTHO05D007567 2.4e-55 219.9 269 49.4
Cfa008039 Carpinus fangiana HOM05D006511 ORTHO05D007567 3.1e-55 219.5 270 50.0
vmacro11027 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 3.1e-55 219.5 197 69.0
Gohir.D08G249200 Gossypium hirsutum HOM05D006511 ORTHO05D007567 4.1e-55 219.2 269 47.6
Sc01g0000050 Simmondsia chinensis HOM05D006511 ORTHO05D007567 4.1e-55 219.2 269 49.1
Gorai.004G265800 Gossypium raimondii HOM05D006511 ORTHO05D007567 5.4e-55 218.8 269 47.6
Psat7g227400 Pisum sativum HOM05D006511 ORTHO05D007567 1.2e-54 217.6 270 45.9
Sp1g28980 Schrenkiella parvula HOM05D006511 ORTHO05D007567 1.6e-54 217.2 269 49.1
Haze_13990 Corylus avellana HOM05D006511 ORTHO05D007567 7.7e-54 214.9 276 47.8
Carub.0001s3169 Capsella rubella HOM05D006511 ORTHO05D007567 1.0e-53 214.5 269 48.7
AT1G33500 Arabidopsis thaliana HOM05D006511 ORTHO05D007567 1.3e-53 214.2 269 49.4
TPR.G34175 Trifolium pratense HOM05D006511 ORTHO05D007567 2.9e-53 213.0 271 46.9
BraA05t21311Z Brassica rapa HOM05D006511 ORTHO05D007567 2.5e-52 209.9 284 46.5
Sopen11g020540 Solanum pennellii HOM05D006511 ORTHO05D007567 2.5e-52 209.9 272 46.0
DCAR_014062 Daucus carota HOM05D006511 ORTHO05D007567 5.5e-52 208.8 277 48.0
Solyc11g045100.2 Solanum lycopersicum HOM05D006511 ORTHO05D007567 2.3e-50 203.4 272 46.0
ECA247G1184 Erigeron canadensis HOM05D006511 ORTHO05D007567 3.0e-50 203.0 262 46.6
arahy.Tifrunner.gnm1.ann1.HN79E8 Arachis hypogaea HOM05D006511 ORTHO05D007567 6.8e-50 201.8 314 40.8
Gohir.A08G228900 Gossypium hirsutum HOM05D006511 ORTHO05D007567 5.7e-49 198.7 269 44.6
SGA_v2.0_scaffold118G32636 Striga asiatica HOM05D006511 ORTHO05D007567 2.9e-48 196.4 269 45.7
VMungo1127G0740 Vigna mungo HOM05D006511 ORTHO05D007567 4.9e-48 195.7 260 45.4
Aa31LG6G7970 Aethionema arabicum HOM05D006511 ORTHO05D007567 6.3e-48 195.3 301 42.2
Migut.C01397 Erythranthe guttata HOM05D006511 ORTHO05D007567 6.3e-48 195.3 269 44.2
Hma1.2p1_1405F.1_g281380 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 6.3e-48 195.3 158 67.7
MBI15_g27824_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 9.2e-47 191.4 277 42.6
ClCG11G008290 Citrullus lanatus HOM05D006511 ORTHO05D007567 2.7e-46 189.9 338 42.0
SalBow7G4276 Salvia bowleyana HOM05D006511 ORTHO05D007567 3.5e-46 189.5 317 40.4
PGSC0003DMG401019059 Solanum tuberosum HOM05D006511 ORTHO05D007567 1.7e-45 187.2 255 43.5
MELO3C008102.2 Cucumis melo HOM05D006511 ORTHO05D007567 5.0e-45 185.7 272 43.8
Lj3g0014137 Lotus japonicus HOM05D006511 ORTHO05D007567 5.0e-45 185.7 270 43.0
MBI15_g27821_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 2.5e-44 183.3 277 41.2
FvH4_2g04930 Fragaria vesca HOM05D006511 ORTHO05D007567 1.6e-43 180.6 232 49.6
FAN24G3334 Fragaria x ananassa HOM05D006511 ORTHO05D007567 6.1e-43 178.7 232 49.1
AUR62038542 Chenopodium quinoa HOM05D006511 ORTHO05D007567 2.3e-42 176.8 252 43.3
Hma1.2p1_1476F.1_g285820 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 2.3e-42 176.8 172 58.7
COL.COLO4_05044 Corchorus olitorius HOM05D006511 ORTHO05D007567 7.5e-41 171.8 216 48.1
FAN20G1821 Fragaria x ananassa HOM05D006511 ORTHO05D007567 1.6e-38 164.1 222 48.6
Ca_13616_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 2.7e-38 163.3 289 39.4
Ca_30187_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 2.7e-38 163.3 289 39.4
COL.COLO4_05796 Corchorus olitorius HOM05D006511 ORTHO05D007567 1.3e-37 161.0 340 35.0
Eucgr.F04079 Eucalyptus grandis HOM05D006511 ORTHO05D007567 2.3e-37 160.2 128 68.0
CsaV3_2G033310 Cucumis sativus L. HOM05D006511 ORTHO05D007567 5.0e-37 159.1 279 40.5
Atru.chr13.2578 Acer truncatum HOM05D006511 ORTHO05D007567 3.3e-36 156.4 270 40.0
arahy.Tifrunner.gnm1.ann1.VJ45CS Arachis hypogaea HOM05D006511 ORTHO05D007567 1.6e-35 154.1 128 60.9
Sc01g0000180 Simmondsia chinensis HOM05D006511 ORTHO05D007567 2.1e-35 153.7 128 66.4
PGR004G0115 Punica granatum HOM05D006511 ORTHO05D007567 8.1e-35 151.8 253 38.7
Aqoxy6G00041 Aquilegia oxysepala HOM05D006511 ORTHO05D007567 1.4e-34 151.0 269 39.0
EL10Ac1g01283 Beta vulgaris HOM05D006511 ORTHO05D007567 1.4e-34 151.0 270 39.3
Cc10_g16070 Coffea canephora HOM05D006511 ORTHO05D007567 8.9e-34 148.3 214 43.5
Ciclev10023919m.g Citrus clementina HOM05D006511 ORTHO05D007567 2.0e-33 147.1 142 59.9
AUR62013391 Chenopodium quinoa HOM05D006511 ORTHO05D007567 2.2e-32 143.7 240 38.8
HPP92_003819 Vanilla planifolia HOM05D006511 ORTHO05D007567 1.1e-31 141.4 269 34.6
CDE10G1127 Ceratophyllum demersum HOM05D006511 ORTHO05D007567 3.2e-31 139.8 174 47.7
Medtr1g067720 Medicago truncatula HOM05D006511 ORTHO05D007567 7.1e-31 138.7 146 52.7
Lj8A308G12 Lonicera japonica HOM05D006511 ORTHO05D007567 5.1e-29 132.5 121 61.2
Ah.13g067720 Amaranthus hybridus HOM05D006511 ORTHO05D007567 7.3e-28 128.6 234 36.3
Nitab4.5_0001489g0030 Nicotiana tabacum HOM05D006511 ORTHO05D007567 8.1e-27 125.2 272 34.6
Thhalv10008295m.g Eutrema salsugineum HOM05D006511 ORTHO05D007567 2.3e-26 123.6 225 37.8
AL1G47890 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 3.1e-26 123.2 189 41.8
Peaxi162Scf00078g01026 Petunia axillaris HOM05D006511 ORTHO05D007567 2.6e-25 120.2 270 33.3
vmacro11028 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 1.7e-24 117.5 66 87.9
unitig_749.g13868 Utricularia gibba HOM05D006511 ORTHO05D007567 6.4e-24 115.5 269 33.8
Haze_13992 Corylus avellana HOM05D006511 ORTHO05D007567 2.7e-22 110.2 81 72.8
Os08g0320300 Oryza sativa ssp. japonica HOM05D006511 ORTHO05D007567 2.7e-22 110.2 149 40.9
Zm00001eb028220 Zea mays HOM05D006511 ORTHO05D007567 7.3e-20 102.1 221 33.0
MSTRG.1607 Avicennia marina HOM05D006511 ORTHO05D007567 5.2e-18 95.9 180 36.7
ATR1204G001 Amborella trichopoda HOM05D006511 ORTHO05D007567 2.0e-17 94.0 183 33.3
Medtr1g067710 Medicago truncatula HOM05D006511 ORTHO05D007567 2.9e-16 90.1 110 43.6
Cpa.g.sc142.8 Carica papaya HOM05D006511 ORTHO05D007567 1.9e-15 87.4 208 34.1
Lalb_Chr19g0131891 Lupinus albus HOM05D006511 ORTHO05D007567 2.4e-15 87.0 77 57.1
AL1G48040 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 3.2e-15 86.7 84 54.8
Eucgr.F04078 Eucalyptus grandis HOM05D006511 ORTHO05D007567 3.5e-14 83.2 90 50.0
SMO137G0232 Selaginella moellendorffii HOM05D006511 ORTHO05D007567 4.6e-14 82.8 137 33.6
Lalb_Chr19g0131901 Lupinus albus HOM05D006511 ORTHO05D007567 6.0e-14 82.4 89 50.6
arahy.Tifrunner.gnm1.ann1.FKD4F4 Arachis hypogaea HOM05D006511 ORTHO05D007567 1.7e-13 80.9 89 43.8
COL.COLO4_36458 Corchorus olitorius HOM05D006511 ORTHO05D007567 3.0e-13 80.1 80 52.5
Haze_13999 Corylus avellana HOM05D006511 ORTHO05D007567 3.9e-13 79.7 69 59.4
Nitab4.5_0000009g0490 Nicotiana tabacum HOM05D006511 ORTHO05D007567 1.1e-12 78.2 268 27.2
Haze_13997 Corylus avellana HOM05D006511 ORTHO05D007567 2.5e-12 77.0 64 56.2
Sc01g0000190 Simmondsia chinensis HOM05D006511 ORTHO05D007567 9.6e-12 75.1 80 45.0
Nn5g27242 Nelumbo nucifera HOM05D006511 ORTHO05D007567 2.4e-10 70.5 66 50.0
Lsat_1_v5_gn_0_19000 Lactuca sativa HOM05D006511 ORTHO05D007567 3.4e-09 66.6 93 41.9
Lalb_Chr19g0131881 Lupinus albus HOM05D006511 ORTHO05D007567 1.3e-08 64.7 48 70.8
CSS0011431 Camellia sinensis var. sinensis HOM05D019684 ORTHO05D007567 4.9e-08 62.8 68 51.5
CSS0043730 Camellia sinensis var. sinensis HOM05D019684 ORTHO05D007567 4.9e-08 62.8 68 51.5
CSS0032551 Camellia sinensis var. sinensis HOM05D019684 ORTHO05D007567 6.4e-08 62.4 68 51.5
CSS0043606 Camellia sinensis var. sinensis HOM05D019684 ORTHO05D007567 6.4e-08 62.4 68 51.5
CSS0033374 Camellia sinensis var. sinensis HOM05D019684 ORTHO05D007567 1.9e-07 60.8 67 52.2
Ciclev10023084m.g Citrus clementina HOM05D006511 ORTHO05D007567 2.4e-07 60.5 80 45.0
AagrBONN_evm.TU.Sc2ySwM_362.2028 Anthoceros agrestis HOM05D006511 ORTHO05D007567 1.2e-06 58.2 192 25.0
CSS0046295 Camellia sinensis var. sinensis HOM05D019684 ORTHO05D007567 2.1e-06 57.4 68 48.5


User provided reference genes

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