Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0169200 Rhododendron simsii HOM05D007400 ORTHO05D009351 6.7e-235 817.0 423 100.0
vmacro11006 Vaccinium macrocarpon HOM05D007400 ORTHO05D009351 4.6e-74 282.7 337 52.2
Lj2A352T41 Lonicera japonica HOM05D007400 ORTHO05D009351 1.8e-54 217.6 298 46.0
Actinidia11209 Actinidia chinensis HOM05D007400 ORTHO05D009351 5.3e-54 216.1 293 46.4
CAN.G1222.5 Capsicum annuum HOM05D007400 ORTHO05D009351 3.2e-51 206.8 299 44.8
Hma1.2p1_0040F.1_g025040 Hydrangea macrophylla HOM05D007400 ORTHO05D009351 9.3e-51 205.3 300 45.0
Peaxi162Scf00149g01015 Petunia axillaris HOM05D007400 ORTHO05D009351 9.3e-51 205.3 301 43.5
Cfa000725 Carpinus fangiana HOM05D007400 ORTHO05D009351 2.1e-50 204.1 355 39.4
CiPaw.10G065400 Carya illinoinensis HOM05D007400 ORTHO05D009351 2.1e-50 204.1 297 43.8
Solyc02g069130.3 Solanum lycopersicum HOM05D007400 ORTHO05D009351 2.7e-50 203.8 303 42.9
Manes.16G059200 Manihot esculenta HOM05D007400 ORTHO05D009351 3.5e-50 203.4 330 41.8
Sopen02g018260 Solanum pennellii HOM05D007400 ORTHO05D009351 3.5e-50 203.4 303 42.6
HanXRQChr15g0487331 Helianthus annuus HOM05D007400 ORTHO05D009351 6.0e-50 202.6 297 44.1
CSS0044125 Camellia sinensis var. sinensis HOM05D007400 ORTHO05D009351 7.8e-50 202.2 166 66.3
MD00G1111500 Malus domestica HOM05D007400 ORTHO05D009351 7.8e-50 202.2 292 42.1
Potri.012G119800 Populus trichocarpa HOM05D007400 ORTHO05D009351 1.0e-49 201.8 290 43.1
Cc09_g06320 Coffea canephora HOM05D007400 ORTHO05D009351 1.3e-49 201.4 304 44.4
CSS0019726 Camellia sinensis var. sinensis HOM05D007400 ORTHO05D009351 3.0e-49 200.3 165 66.7
Migut.L00012 Erythranthe guttata HOM05D007400 ORTHO05D009351 3.9e-49 199.9 299 42.1
Oeu050064.1 Olea europaea HOM05D007400 ORTHO05D009351 3.9e-49 199.9 290 44.5
Nn7g38084 Nelumbo nucifera HOM05D007400 ORTHO05D009351 1.5e-48 198.0 282 44.3
AT4G19830 Arabidopsis thaliana HOM05D007400 ORTHO05D009351 2.5e-48 197.2 288 43.8
Duzib192G0901 Durio zibethinus HOM05D007400 ORTHO05D009351 2.5e-48 197.2 309 43.0
GSVIVG01012101001 Vitis vinifera HOM05D007400 ORTHO05D009351 3.3e-48 196.8 289 45.7
Ciclev10016614m.g Citrus clementina HOM05D007400 ORTHO05D009351 1.3e-47 194.9 265 46.0
PGR042G1002 Punica granatum HOM05D007400 ORTHO05D009351 1.6e-47 194.5 270 44.4
CARHR226600 Cardamine hirsuta HOM05D007400 ORTHO05D009351 2.8e-47 193.7 288 42.7
DCAR_003791 Daucus carota HOM05D007400 ORTHO05D009351 2.8e-47 193.7 287 43.9
RcHm_v2.0_Chr4g0402661 Rosa chinensis HOM05D007400 ORTHO05D009351 2.8e-47 193.7 338 37.0
THA.LOC104811504 Tarenaya hassleriana HOM05D007400 ORTHO05D009351 2.8e-47 193.7 276 43.5
Lsat_1_v5_gn_8_117760 Lactuca sativa HOM05D007400 ORTHO05D009351 3.6e-47 193.4 295 43.1
TWI63G0941 Tripterygium wilfordii HOM05D007400 ORTHO05D009351 6.2e-47 192.6 296 42.6
Thhalv10026156m.g Eutrema salsugineum HOM05D007400 ORTHO05D009351 8.1e-47 192.2 288 43.1
FvH4_4g09390 Fragaria vesca HOM05D007400 ORTHO05D009351 8.1e-47 192.2 293 41.3
ClCG01G009370 Citrullus lanatus HOM05D007400 ORTHO05D009351 1.1e-46 191.8 296 41.2
Gohir.A05G144700 Gossypium hirsutum HOM05D007400 ORTHO05D009351 1.1e-46 191.8 285 43.2
Lj5g0000759 Lotus japonicus HOM05D007400 ORTHO05D009351 1.1e-46 191.8 297 42.4
Gorai.009G151100 Gossypium raimondii HOM05D007400 ORTHO05D009351 1.4e-46 191.4 288 42.4
C03p82350 Brassica napus HOM05D007400 ORTHO05D009351 1.8e-46 191.0 291 42.3
Dinv04112 Davidia involucrata HOM05D007400 ORTHO05D009351 1.8e-46 191.0 217 53.5
Atru.chr10.612 Acer truncatum HOM05D007400 ORTHO05D009351 2.4e-46 190.7 335 39.1
CANSAT11G1633 Cannabis sativa HOM05D007400 ORTHO05D009351 3.1e-46 190.3 265 43.8
Carub.0007s2138 Capsella rubella HOM05D007400 ORTHO05D009351 4.0e-46 189.9 288 43.1
VMungo0720G1846 Vigna mungo HOM05D007400 ORTHO05D009351 4.0e-46 189.9 302 42.4
BcaC01g00636 Brassica carinata HOM05D007400 ORTHO05D009351 5.3e-46 189.5 291 41.9
BolC3t20518H Brassica oleracea HOM05D007400 ORTHO05D009351 5.3e-46 189.5 291 41.9
Gohir.D05G147100 Gossypium hirsutum HOM05D007400 ORTHO05D009351 5.3e-46 189.5 286 42.3
Zm00001eb207360 Zea mays HOM05D007400 ORTHO05D009351 5.3e-46 189.5 266 43.2
BcaB03g11643 Brassica carinata HOM05D007400 ORTHO05D009351 6.9e-46 189.1 294 41.8
AUR62011827 Chenopodium quinoa HOM05D007400 ORTHO05D009351 6.9e-46 189.1 286 42.0
Medtr1g061080 Medicago truncatula HOM05D007400 ORTHO05D009351 6.9e-46 189.1 304 42.1
Os02g0168700 Oryza sativa ssp. japonica HOM05D007400 ORTHO05D009351 6.9e-46 189.1 293 41.0
A08p14510 Brassica napus HOM05D007400 ORTHO05D009351 9.0e-46 188.7 291 41.9
BraA08t33439Z Brassica rapa HOM05D007400 ORTHO05D009351 9.0e-46 188.7 291 41.9
CDE05G1756 Ceratophyllum demersum HOM05D007400 ORTHO05D009351 9.0e-46 188.7 286 42.0
TPR.G5680 Trifolium pratense HOM05D007400 ORTHO05D009351 9.0e-46 188.7 304 41.8
TAR626G1335 Trochodendron aralioides HOM05D007400 ORTHO05D009351 1.2e-45 188.3 286 42.3
ECA232G4176 Erigeron canadensis HOM05D007400 ORTHO05D009351 1.5e-45 188.0 281 42.7
Eucgr.E01894 Eucalyptus grandis HOM05D007400 ORTHO05D009351 1.5e-45 188.0 287 42.5
arahy.Tifrunner.gnm1.ann1.L1RKW0 Arachis hypogaea HOM05D007400 ORTHO05D009351 2.6e-45 187.2 298 42.3
CsaV3_1G046550 Cucumis sativus L. HOM05D007400 ORTHO05D009351 2.6e-45 187.2 298 39.9
Cpa.g.sc135.34 Carica papaya HOM05D007400 ORTHO05D009351 3.4e-45 186.8 287 42.2
arahy.Tifrunner.gnm1.ann1.ARB9WH Arachis hypogaea HOM05D007400 ORTHO05D009351 4.5e-45 186.4 298 41.9
Haze_06019 Corylus avellana HOM05D007400 ORTHO05D009351 7.6e-45 185.7 384 37.0
FAN22G1838 Fragaria x ananassa HOM05D007400 ORTHO05D009351 7.6e-45 185.7 293 40.6
ATR0763G247 Amborella trichopoda HOM05D007400 ORTHO05D009351 9.9e-45 185.3 295 41.7
Lalb_Chr09g0328751 Lupinus albus HOM05D007400 ORTHO05D009351 9.9e-45 185.3 302 41.4
MBI09_g28984_MAGBIO Magnolia biondii HOM05D007400 ORTHO05D009351 9.9e-45 185.3 264 46.6
MELO3C021776.2 Cucumis melo HOM05D007400 ORTHO05D009351 2.9e-44 183.7 309 38.5
Sp7g18330 Schrenkiella parvula HOM05D007400 ORTHO05D009351 2.9e-44 183.7 288 41.7
Glyma.10G066600 Glycine max HOM05D007400 ORTHO05D009351 3.8e-44 183.3 305 41.0
Sed0027636 Sechium edule HOM05D007400 ORTHO05D009351 4.9e-44 183.0 332 38.0
Aa31LG6G2310 Aethionema arabicum HOM05D007400 ORTHO05D009351 1.1e-43 181.8 285 41.1
PSO675G6700 Papaver somniferum HOM05D007400 ORTHO05D009351 1.1e-43 181.8 279 42.3
Phvul.007G223000 Phaseolus vulgaris HOM05D007400 ORTHO05D009351 2.4e-43 180.6 307 40.7
Cc11_g00930 Coffea canephora HOM05D007400 ORTHO05D009351 2.7e-42 177.2 277 42.2
unitig_61.g26077 Utricularia gibba HOM05D007400 ORTHO05D009351 3.5e-42 176.8 265 41.5
COL.COLO4_30978 Corchorus olitorius HOM05D000065 ORTHO05D001606 5.1e-41 172.9 164 59.8
Ca_11627_v3 Cicer arietinum L. HOM05D007400 ORTHO05D009351 1.1e-40 171.8 302 39.7
MBI09_g37060_MAGBIO Magnolia biondii HOM05D007400 ORTHO05D009351 4.3e-40 169.9 237 45.1
Prupe.1G087100 Prunus persica HOM05D007400 ORTHO05D009351 5.6e-40 169.5 204 47.5
Psat6g078400 Pisum sativum HOM05D007400 ORTHO05D009351 2.1e-39 167.5 195 50.8
QL11p018093 Quercus lobata HOM05D007400 ORTHO05D009351 2.1e-39 167.5 237 43.9
AL7G34250 Arabidopsis lyrata HOM05D007400 ORTHO05D009351 8.1e-39 165.6 160 57.5
FAN12G2033 Fragaria x ananassa HOM05D007400 ORTHO05D009351 1.1e-38 165.2 163 54.6
Nitab4.5_0017218g0010 Nicotiana tabacum HOM05D007400 ORTHO05D009351 2.4e-38 164.1 232 44.0
CSS0009058 Camellia sinensis var. sinensis HOM05D007400 ORTHO05D009351 5.3e-38 162.9 236 43.6
Thecc.06G140800 Theobroma cacao HOM05D007400 ORTHO05D009351 5.3e-38 162.9 237 43.5
CSS0000937 Camellia sinensis var. sinensis HOM05D007400 ORTHO05D009351 2.0e-37 161.0 236 43.6
SMO270G0023 Selaginella moellendorffii HOM05D007400 ORTHO05D009351 2.6e-37 160.6 266 37.2
Mapoly0025s0105 Marchantia polymorpha HOM05D007400 ORTHO05D009351 3.4e-37 160.2 267 36.3
AagrBONN_evm.TU.Sc2ySwM_344.2066 Anthoceros agrestis HOM05D003486 ORTHO05D004600 9.3e-35 152.1 265 36.6
Pp3c2_2300 Physcomitrium patens HOM05D007400 ORTHO05D009351 9.3e-35 152.1 299 34.4
Sc05g0000500 Simmondsia chinensis HOM05D007400 ORTHO05D009351 1.0e-33 148.7 234 39.7
MBI08_g39084_MAGBIO Magnolia biondii HOM05D007400 ORTHO05D009351 3.9e-33 146.7 201 46.8
PSO675G3258 Papaver somniferum HOM05D007400 ORTHO05D009351 6.7e-33 146.0 136 58.8
Nitab4.5_0002056g0010 Nicotiana tabacum HOM05D007400 ORTHO05D009351 2.9e-28 130.6 104 65.4
Thecc.06G140000 Theobroma cacao HOM05D007400 ORTHO05D009351 2.3e-25 120.9 97 62.9
Sabra12G0089100 Salix brachista HOM05D007400 ORTHO05D009351 3.9e-25 120.2 99 64.6
Ah.02g112200 Amaranthus hybridus HOM05D007400 ORTHO05D009351 4.8e-23 113.2 67 79.1
SGA_v2.0_scaffold341G49377 Striga asiatica HOM05D007400 ORTHO05D009351 1.2e-21 108.6 258 33.7
EL10As5g23512 Beta vulgaris HOM05D007400 ORTHO05D009351 4.6e-18 96.7 257 31.9
Ah.02g112190 Amaranthus hybridus HOM05D007400 ORTHO05D009351 1.8e-17 94.7 166 38.0
Migut.C00263 Erythranthe guttata HOM05D007400 ORTHO05D009351 3.0e-17 94.0 206 34.5
AUR62024671 Chenopodium quinoa HOM05D007400 ORTHO05D009351 3.9e-17 93.6 277 29.2
AL7G34270 Arabidopsis lyrata HOM05D000741 ORTHO05D000506 5.7e-16 89.7 189 34.4
MBI03_g31611_MAGBIO Magnolia biondii HOM05D007400 ORTHO05D009351 1.5e-08 65.1 35 85.7


User provided reference genes

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