Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0162000 Rhododendron simsii HOM05D015811 ORTHO05D014676 4.1e-220 767.7 367 100.0
Rhsim04G0226700 Rhododendron simsii HOM05D015811 ORTHO05D014676 3.6e-208 728.0 367 94.3
Rhsim11G0054100 Rhododendron simsii HOM05D015811 ORTHO05D014676 3.0e-170 602.1 339 86.7
Rhsim02G0161800 Rhododendron simsii HOM05D015811 ORTHO05D014676 5.6e-169 597.8 365 81.4
Rhsim04G0226600 Rhododendron simsii HOM05D015811 ORTHO05D014676 3.7e-165 585.1 365 79.7
Rhsim04G0226100 Rhododendron simsii HOM05D015811 ORTHO05D014676 1.2e-126 457.2 369 63.4
Rhsim04G0227100 Rhododendron simsii HOM05D015811 ORTHO05D014676 5.5e-116 421.8 368 59.8
Rhsim02G0162400 Rhododendron simsii HOM05D015811 ORTHO05D014676 3.5e-115 419.1 369 60.2
RhsimUnG0050900 Rhododendron simsii HOM05D015811 ORTHO05D014676 8.3e-72 275.0 240 61.2
TWI12G1353 Tripterygium wilfordii HOM05D022892 ORTHO05D014676 8.1e-19 99.0 200 31.5
TWI79G0083 Tripterygium wilfordii HOM05D022892 ORTHO05D014676 1.4e-18 98.2 212 32.5
TWI79G1583 Tripterygium wilfordii HOM05D022892 ORTHO05D014676 3.1e-18 97.1 197 32.0
TWI79G0211 Tripterygium wilfordii HOM05D022892 ORTHO05D014676 1.2e-17 95.1 187 33.2
COL.COLO4_29430 Corchorus olitorius HOM05D035412 ORTHO05D019051 3.2e-15 87.0 344 23.5
TWI75G0303 Tripterygium wilfordii HOM05D022892 ORTHO05D014676 5.4e-15 86.3 189 29.6
CSS0000622 Camellia sinensis var. sinensis HOM05D019272 ORTHO05D020252 1.8e-13 81.3 308 26.6
CSS0029958 Camellia sinensis var. sinensis HOM05D019272 ORTHO05D020252 1.8e-13 81.3 308 26.6
PGR031G0854 Punica granatum HOM05D023452 ORTHO05D019051 3.9e-13 80.1 255 28.2
PGR044G2517 Punica granatum HOM05D023452 ORTHO05D019051 5.1e-13 79.7 280 28.2
vmacro12005 Vaccinium macrocarpon HOM05D019272 ORTHO05D020252 4.3e-12 76.6 239 27.6
COL.COLO4_29429 Corchorus olitorius HOM05D035412 ORTHO05D019051 2.1e-11 74.3 315 24.8
PGR031G1231 Punica granatum HOM05D023452 ORTHO05D019051 2.8e-11 73.9 383 24.3
Thecc.03G305700 Theobroma cacao HOM05D017991 ORTHO05D020493 8.1e-11 72.4 179 29.1
PGR031G1460 Punica granatum HOM05D023452 ORTHO05D019051 1.4e-10 71.6 252 28.6
COL.COLO4_16992 Corchorus olitorius HOM05D017991 ORTHO05D020493 1.8e-10 71.2 186 32.8
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 2.4e-10 70.9 161 32.3
COL.COLO4_16993 Corchorus olitorius HOM05D017991 ORTHO05D020493 3.1e-10 70.5 247 29.1
CSS0013471 Camellia sinensis var. sinensis HOM05D000249 ORTHO05D000206 3.4e-09 67.0 206 25.7
CSS0028906 Camellia sinensis var. sinensis HOM05D000249 ORTHO05D000206 3.4e-09 67.0 206 25.7
vmacro07839 Vaccinium macrocarpon HOM05D019272 ORTHO05D020252 4.5e-09 66.6 274 25.5
Cc07_g16260 Coffea canephora HOM05D000249 ORTHO05D000206 5.8e-09 66.2 179 29.1
Rhsim02G0133500 Rhododendron simsii HOM05D019272 ORTHO05D020252 7.6e-09 65.9 174 31.0
Peaxi162Scf00359g00005 Petunia axillaris HOM05D000249 ORTHO05D000206 3.8e-08 63.5 201 27.4
Rhsim04G0245000 Rhododendron simsii HOM05D019272 ORTHO05D020252 6.4e-08 62.8 249 27.3
Rhsim10G0150200 Rhododendron simsii HOM05D000249 ORTHO05D000206 1.4e-07 61.6 172 27.9
Thhalv10002193m.g Eutrema salsugineum HOM05D000249 ORTHO05D015951 1.9e-07 61.2 81 38.3
COL.COLO4_16986 Corchorus olitorius HOM05D017991 ORTHO05D020493 2.4e-07 60.8 86 34.9
Actinidia16043 Actinidia chinensis HOM05D000249 ORTHO05D000206 4.6e-06 56.6 172 26.7
FAN09G2688 Fragaria x ananassa HOM05D008398 ORTHO05D005682 4.6e-06 56.6 131 33.6


User provided reference genes

Program Settings