Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0157300 Rhododendron simsii HOM05D000002 ORTHO05D009184 5.7e-46 187.2 92 100.0
Rhsim02G0155100 Rhododendron simsii HOM05D000002 ORTHO05D009184 1.7e-34 149.1 91 81.3
Rhsim01G0147900 Rhododendron simsii HOM05D000002 ORTHO05D009184 3.8e-34 147.9 90 81.1
Rhsim09G0070700 Rhododendron simsii HOM05D000002 ORTHO05D009184 8.5e-34 146.7 90 80.0
Rhsim08G0142800 Rhododendron simsii HOM05D000002 ORTHO05D009184 4.2e-33 144.4 90 78.9
RhsimUnG0229800 Rhododendron simsii HOM05D000002 ORTHO05D009184 4.2e-33 144.4 88 80.7
Rhsim07G0144200 Rhododendron simsii HOM05D000111 ORTHO05D000134 1.7e-29 132.5 76 84.2
RhsimUnG0242900 Rhododendron simsii HOM05D005456 ORTHO05D006805 1.7e-29 132.5 76 84.2
Rhsim11G0013900 Rhododendron simsii HOM05D000002 ORTHO05D009184 2.2e-29 132.1 78 82.1
Rhsim10G0112700 Rhododendron simsii HOM05D000002 ORTHO05D009184 3.7e-29 131.3 76 82.9
QL05p052824 Quercus lobata HOM05D000002 ORTHO05D000001 4.2e-17 91.3 85 50.6
Rhsim02G0158100 Rhododendron simsii HOM05D000002 ORTHO05D009184 5.5e-17 90.9 85 54.1
RhsimUnG0017000 Rhododendron simsii HOM05D000002 ORTHO05D009184 5.5e-17 90.9 85 55.3
RhsimUnG0133800 Rhododendron simsii HOM05D000002 ORTHO05D009184 1.6e-16 89.4 85 54.1
TAR654G0001 Trochodendron aralioides HOM05D000002 ORTHO05D009184 2.8e-16 88.6 89 53.9
QL05p080279 Quercus lobata HOM05D000002 ORTHO05D009184 4.7e-16 87.8 85 50.6
PSO832G0651 Papaver somniferum HOM05D000002 ORTHO05D009184 2.3e-15 85.5 77 53.2
PSO541G2535 Papaver somniferum HOM05D000002 ORTHO05D009184 4.0e-15 84.7 74 55.4
Thhalv10002214m.g Eutrema salsugineum HOM05D000002 ORTHO05D009184 5.7e-14 80.9 74 51.4
QL10p046058 Quercus lobata HOM05D000002 ORTHO05D000001 5.7e-14 80.9 66 56.1
PSO675G0504 Papaver somniferum HOM05D000002 ORTHO05D000001 9.8e-14 80.1 71 53.5
PSO384G3605 Papaver somniferum HOM05D000002 ORTHO05D009184 2.2e-13 79.0 91 47.3
Thhalv10023107m.g Eutrema salsugineum HOM05D000002 ORTHO05D009184 2.8e-13 78.6 74 50.0
Thhalv10003344m.g Eutrema salsugineum HOM05D000002 ORTHO05D009184 3.7e-13 78.2 77 48.1
TWI79G1259 Tripterygium wilfordii HOM05D000002 ORTHO05D009184 8.3e-13 77.0 68 54.4
PGSC0003DMG400045785 Solanum tuberosum HOM05D000002 ORTHO05D009184 1.4e-12 76.3 89 42.7
QL02p054488 Quercus lobata HOM05D000002 ORTHO05D000001 5.4e-12 74.3 90 44.4
COL.COLO4_28342 Corchorus olitorius HOM05D000002 ORTHO05D009184 2.0e-11 72.4 68 51.5
Nitab4.5_0010916g0030 Nicotiana tabacum HOM05D000002 ORTHO05D009184 2.9e-10 68.6 81 44.4
HanXRQChr16g0510691 Helianthus annuus HOM05D000002 ORTHO05D009184 2.5e-09 65.5 77 41.6
Oeu035362.1 Olea europaea HOM05D000002 ORTHO05D009184 3.3e-09 65.1 66 39.4
Oeu040982.1 Olea europaea HOM05D000002 ORTHO05D009184 3.3e-09 65.1 73 42.5
Nitab4.5_0007418g0040 Nicotiana tabacum HOM05D000002 ORTHO05D009184 5.6e-09 64.3 66 43.9
Nitab4.5_0005334g0020 Nicotiana tabacum HOM05D000002 ORTHO05D009184 9.5e-09 63.5 68 45.6
Oeu057114.1 Olea europaea HOM05D000002 ORTHO05D009184 9.5e-09 63.5 81 42.0
Rhsim09G0157400 Rhododendron simsii HOM05D000002 ORTHO05D009184 1.6e-08 62.8 61 47.5
Nitab4.5_0002476g0030 Nicotiana tabacum HOM05D000002 ORTHO05D009184 2.1e-08 62.4 81 43.2
Oeu008281.1 Olea europaea HOM05D000002 ORTHO05D009184 2.1e-08 62.4 81 40.7
Nitab4.5_0002656g0070 Nicotiana tabacum HOM05D000002 ORTHO05D009184 2.8e-08 62.0 88 39.8
Sopen10g012010 Solanum pennellii HOM05D000002 ORTHO05D009184 2.8e-08 62.0 64 45.3
Hund15077 Selenicereus undatus HOM05D000002 ORTHO05D009184 4.7e-08 61.2 68 42.6
CSS0015301 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.0e-08 60.5 90 42.2
CSS0022698 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.0e-08 60.5 90 42.2
PGSC0003DMG400004248 Solanum tuberosum HOM05D000002 ORTHO05D009184 1.0e-07 60.1 58 48.3
COL.COLO4_22322 Corchorus olitorius HOM05D000002 ORTHO05D009184 1.8e-07 59.3 68 38.2
COL.COLO4_04258 Corchorus olitorius HOM05D000002 ORTHO05D009184 3.0e-07 58.5 68 39.7
Hund23381 Selenicereus undatus HOM05D000002 ORTHO05D009184 3.0e-07 58.5 68 38.2
COL.COLO4_12798 Corchorus olitorius HOM05D000002 ORTHO05D009184 4.0e-07 58.2 72 38.9
CSS0029189 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-07 57.8 90 41.1
COL.COLO4_05739 Corchorus olitorius HOM05D000002 ORTHO05D009184 5.2e-07 57.8 68 38.2
COL.COLO4_32152 Corchorus olitorius HOM05D000002 ORTHO05D009184 5.2e-07 57.8 68 41.2
CSS0018707 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.8e-07 57.4 90 41.1
COL.COLO4_26578 Corchorus olitorius HOM05D000002 ORTHO05D009184 1.2e-06 56.6 68 38.2
COL.COLO4_37841 Corchorus olitorius HOM05D000002 ORTHO05D009184 1.2e-06 56.6 68 38.2
Sopen09g018840 Solanum pennellii HOM05D001078 ORTHO05D000034 1.2e-06 56.6 73 41.1
Nitab4.5_0000352g0030 Nicotiana tabacum HOM05D000002 ORTHO05D009184 2.6e-06 55.5 66 39.4
COL.COLO4_34309 Corchorus olitorius HOM05D000002 ORTHO05D009184 4.4e-06 54.7 68 41.2
Hund00625 Selenicereus undatus HOM05D000002 ORTHO05D009184 7.5e-06 53.9 68 41.2
Hund17923 Selenicereus undatus HOM05D000002 ORTHO05D009184 7.5e-06 53.9 68 35.3
RhsimUnG0133700 Rhododendron simsii HOM05D000002 ORTHO05D009184 9.8e-06 53.5 52 50.0


User provided reference genes

Program Settings