Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0147800 Rhododendron simsii HOM05D000002 ORTHO05D001134 3.3e-62 241.5 118 100.0
RhsimUnG0016500 Rhododendron simsii HOM05D000002 ORTHO05D001134 2.9e-50 201.8 107 91.6
Rhsim05G0209400 Rhododendron simsii HOM05D000002 ORTHO05D001134 2.2e-34 149.1 87 82.8
CiPaw.09G118100 Carya illinoinensis HOM05D000002 ORTHO05D001134 1.5e-19 99.8 89 58.4
CANSAT01G0602 Cannabis sativa HOM05D000002 ORTHO05D001134 6.4e-18 94.4 84 52.4
CANSAT25G2057 Cannabis sativa HOM05D000002 ORTHO05D001134 6.4e-18 94.4 84 52.4
CANSAT54G2894 Cannabis sativa HOM05D000002 ORTHO05D001134 1.4e-17 93.2 84 51.2
Hma1.2p1_1637F.1_g294870 Hydrangea macrophylla HOM05D000002 ORTHO05D001134 6.7e-15 84.3 66 65.2
Psat0s3596g0040 Pisum sativum HOM05D000002 ORTHO05D001134 3.3e-14 82.0 85 44.7
TWI31G0546 Tripterygium wilfordii HOM05D000002 ORTHO05D001134 1.6e-13 79.7 94 44.7
TPR.G8661 Trifolium pratense HOM05D000002 ORTHO05D000001 2.8e-13 79.0 79 44.3
PSO782G2391 Papaver somniferum HOM05D000002 ORTHO05D001134 8.1e-13 77.4 84 46.4
TAR134G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 5.3e-12 74.7 85 41.2
CANSAT54G2682 Cannabis sativa HOM05D000002 ORTHO05D024746 9.0e-12 73.9 66 53.0
Atru.chr13.1760 Acer truncatum HOM05D000002 ORTHO05D001134 2.6e-11 72.4 101 36.6
Rhsim03G0077200 Rhododendron simsii HOM05D000002 ORTHO05D001134 9.9e-11 70.5 83 38.6
Rhsim10G0199300 Rhododendron simsii HOM05D000002 ORTHO05D001134 9.9e-11 70.5 83 38.6
Rhsim13G0162800 Rhododendron simsii HOM05D000002 ORTHO05D001134 9.9e-11 70.5 83 38.6
RhsimUnG0136500 Rhododendron simsii HOM05D000034 ORTHO05D001134 1.3e-10 70.1 83 38.6
Rhsim11G0112400 Rhododendron simsii HOM05D000002 ORTHO05D001134 2.9e-10 68.9 78 39.7
AUR62032617 Chenopodium quinoa HOM05D000202 ORTHO05D001134 3.8e-10 68.6 102 36.3
Ah.03g146900 Amaranthus hybridus HOM05D000002 ORTHO05D001134 4.9e-10 68.2 95 35.8
RcHm_v2.0_Chr1g0345341 Rosa chinensis HOM05D000002 ORTHO05D001134 4.9e-10 68.2 87 35.6
Lj1g0016784 Lotus japonicus HOM05D007742 ORTHO05D001134 6.4e-10 67.8 90 37.8
Rhsim01G0099200 Rhododendron simsii HOM05D000002 ORTHO05D001134 6.4e-10 67.8 89 37.1
CSS0020121 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-09 66.2 89 36.0
Ca_23898_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.9e-09 66.2 87 37.9
Hma1.2p1_0602F.1_g187600 Hydrangea macrophylla HOM05D000002 ORTHO05D001134 1.9e-09 66.2 100 36.0
Sabra11G0076200 Salix brachista HOM05D000002 ORTHO05D001134 1.9e-09 66.2 81 38.3
MD08G1232100 Malus domestica HOM05D000002 ORTHO05D001134 3.2e-09 65.5 83 38.6
CSS0026966 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-09 65.1 89 36.0
CANSAT01G0154 Cannabis sativa HOM05D000002 ORTHO05D001134 4.2e-09 65.1 65 47.7
CiPaw.09G096200 Carya illinoinensis HOM05D000002 ORTHO05D001134 4.2e-09 65.1 60 51.7
Sopen05g002730 Solanum pennellii HOM05D001102 ORTHO05D001018 7.1e-09 64.3 97 35.1
CSS0043616 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 9.3e-09 63.9 91 33.0
CSS0015894 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.2e-08 63.5 91 33.0
CSS0017973 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.2e-08 63.5 91 33.0
CSS0019952 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.2e-08 63.5 91 33.0
CSS0021489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.2e-08 63.5 91 33.0
CSS0031421 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.2e-08 63.5 91 33.0
CSS0032029 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.2e-08 63.5 91 33.0
CSS0040386 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.2e-08 63.5 91 33.0
CSS0045046 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.2e-08 63.5 91 33.0
CSS0047428 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.2e-08 63.5 91 33.0
MD02G1100700 Malus domestica HOM05D000002 ORTHO05D001134 1.2e-08 63.5 92 34.8
Sabra11G0092000 Salix brachista HOM05D000002 ORTHO05D001134 1.2e-08 63.5 83 37.3
Sp7g07980 Schrenkiella parvula HOM05D000002 ORTHO05D001134 1.2e-08 63.5 70 42.9
Atru.chr11.404 Acer truncatum HOM05D000002 ORTHO05D001134 1.6e-08 63.2 96 34.4
CSS0013561 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.6e-08 63.2 91 33.0
CSS0028775 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-08 63.2 74 40.5
CSS0044748 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.6e-08 63.2 91 33.0
CANSAT01G0412 Cannabis sativa HOM05D000002 ORTHO05D001134 1.6e-08 63.2 65 46.2
CANSAT21G1843 Cannabis sativa HOM05D000002 ORTHO05D001134 1.6e-08 63.2 86 36.0
Atru.chr3.2096 Acer truncatum HOM05D000002 ORTHO05D001134 3.5e-08 62.0 84 36.9
CSS0001359 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 3.5e-08 62.0 91 31.9
CSS0005787 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 3.5e-08 62.0 91 31.9
CSS0048219 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 3.5e-08 62.0 91 31.9
AUR62040777 Chenopodium quinoa HOM05D000002 ORTHO05D000031 3.5e-08 62.0 90 34.4
Sabra11G0075700 Salix brachista HOM05D000002 ORTHO05D001134 3.5e-08 62.0 81 34.6
Sabra18G0065300 Salix brachista HOM05D000002 ORTHO05D001134 1.0e-07 60.5 81 33.3
Sabra19G0009600 Salix brachista HOM05D000002 ORTHO05D001134 1.3e-07 60.1 76 36.8
AL85U10020 Arabidopsis lyrata HOM05D000587 ORTHO05D001561 1.8e-07 59.7 91 31.9
ECA234G2496 Erigeron canadensis HOM05D000327 ORTHO05D001134 1.8e-07 59.7 82 32.9
HanXRQChr13g0409601 Helianthus annuus HOM05D000002 ORTHO05D001134 1.8e-07 59.7 82 34.1
MD15G1059300 Malus domestica HOM05D000002 ORTHO05D001134 1.8e-07 59.7 78 33.3
CSS0004348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 2.3e-07 59.3 86 32.6
HanXRQChr15g0477091 Helianthus annuus HOM05D000002 ORTHO05D001134 2.3e-07 59.3 82 34.1
Sabra05G0016200 Salix brachista HOM05D000002 ORTHO05D001134 2.3e-07 59.3 81 33.3
ECA246G4071 Erigeron canadensis HOM05D000002 ORTHO05D001134 3.0e-07 58.9 90 32.2
Hma1.2p1_0488F.1_g163670 Hydrangea macrophylla HOM05D000002 ORTHO05D001134 3.0e-07 58.9 85 29.4
Sp7g08060 Schrenkiella parvula HOM05D000002 ORTHO05D001134 3.0e-07 58.9 79 39.2
ECA233G4811 Erigeron canadensis HOM05D000002 ORTHO05D001134 3.9e-07 58.5 82 34.1
RcHm_v2.0_Chr4g0390941 Rosa chinensis HOM05D000002 ORTHO05D001134 3.9e-07 58.5 86 33.7
CANSAT54G3019 Cannabis sativa HOM05D000002 ORTHO05D001134 5.1e-07 58.2 92 31.5
ECA233G3826 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-07 58.2 90 32.2
ECA240G0039 Erigeron canadensis HOM05D000002 ORTHO05D001134 6.7e-07 57.8 90 32.2
RcHm_v2.0_Chr1g0368471 Rosa chinensis HOM05D000002 ORTHO05D001134 6.7e-07 57.8 98 29.6
RcHm_v2.0_Chr5g0079181 Rosa chinensis HOM05D000002 ORTHO05D001134 6.7e-07 57.8 80 32.5
THA.LOC104804898 Tarenaya hassleriana HOM05D000002 ORTHO05D001134 6.7e-07 57.8 84 34.5
Rhsim01G0099400 Rhododendron simsii HOM05D000002 ORTHO05D001134 8.7e-07 57.4 83 33.7
THA.LOC104825812 Tarenaya hassleriana HOM05D000002 ORTHO05D001134 8.7e-07 57.4 84 34.5
Dinv01219 Davidia involucrata HOM05D000002 ORTHO05D000001 1.1e-06 57.0 83 32.5
Rhsim03G0051300 Rhododendron simsii HOM05D000002 ORTHO05D001134 1.1e-06 57.0 83 33.7
Rhsim05G0173500 Rhododendron simsii HOM05D000002 ORTHO05D001134 1.1e-06 57.0 83 33.7
Rhsim05G0211500 Rhododendron simsii HOM05D000002 ORTHO05D001134 1.1e-06 57.0 83 33.7
Rhsim09G0038600 Rhododendron simsii HOM05D000002 ORTHO05D001134 1.1e-06 57.0 83 33.7
Rhsim09G0182400 Rhododendron simsii HOM05D000002 ORTHO05D001134 1.1e-06 57.0 83 33.7
Rhsim11G0114100 Rhododendron simsii HOM05D000002 ORTHO05D001134 1.1e-06 57.0 83 33.7
TPR.G34101 Trifolium pratense HOM05D000002 ORTHO05D001134 1.1e-06 57.0 66 37.9
ECA232G2889 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-06 56.6 82 32.9
ECA232G3032 Erigeron canadensis HOM05D000002 ORTHO05D001134 1.5e-06 56.6 82 31.7
Atru.chr4.721 Acer truncatum HOM05D000002 ORTHO05D001134 1.9e-06 56.2 71 36.6
EL10Ac7g17233 Beta vulgaris HOM05D000002 ORTHO05D001134 1.9e-06 56.2 71 42.3
CSS0026945 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-06 56.2 79 35.4
Rhsim03G0212000 Rhododendron simsii HOM05D000002 ORTHO05D001134 1.9e-06 56.2 82 32.9
RcHm_v2.0_Chr3g0496001 Rosa chinensis HOM05D000002 ORTHO05D001134 1.9e-06 56.2 98 28.6
TAR180G0006 Trochodendron aralioides HOM05D000002 ORTHO05D001134 1.9e-06 56.2 89 30.3
CiPaw.11G084200 Carya illinoinensis HOM05D000124 ORTHO05D001134 2.5e-06 55.8 82 34.1
THA.LOC104811890 Tarenaya hassleriana HOM05D000002 ORTHO05D001134 2.5e-06 55.8 87 34.5
ECA238G3259 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-06 55.5 90 31.1
ECA246G2723 Erigeron canadensis HOM05D000002 ORTHO05D001134 3.3e-06 55.5 82 31.7
RcHm_v2.0_Chr5g0082051 Rosa chinensis HOM05D000002 ORTHO05D001134 3.3e-06 55.5 98 27.6
CiPaw.10G127600 Carya illinoinensis HOM05D000002 ORTHO05D001134 4.3e-06 55.1 77 35.1
ECA236G2821 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-06 55.1 82 31.7
HanXRQChr09g0258931 Helianthus annuus HOM05D000002 ORTHO05D001134 4.3e-06 55.1 105 31.4
Rhsim03G0061600 Rhododendron simsii HOM05D003997 ORTHO05D002698 4.3e-06 55.1 57 43.9
THA.LOC104825398 Tarenaya hassleriana HOM05D000002 ORTHO05D001134 4.3e-06 55.1 84 32.1
Aqoxy4G01001 Aquilegia oxysepala HOM05D000002 ORTHO05D001134 5.6e-06 54.7 83 32.5
Thhalv10015426m.g Eutrema salsugineum HOM05D000002 ORTHO05D001134 5.6e-06 54.7 90 34.4
RcHm_v2.0_Chr6g0255561 Rosa chinensis HOM05D000002 ORTHO05D001134 5.6e-06 54.7 88 28.4
Thhalv10014701m.g Eutrema salsugineum HOM05D000002 ORTHO05D001134 7.4e-06 54.3 81 34.6
PSO782G4997 Papaver somniferum HOM05D000002 ORTHO05D000001 7.4e-06 54.3 89 28.1
RcHm_v2.0_Chr2g0173271 Rosa chinensis HOM05D000002 ORTHO05D001134 7.4e-06 54.3 95 27.4
Atru.chr13.1874 Acer truncatum HOM05D000002 ORTHO05D001134 9.6e-06 53.9 100 28.0


User provided reference genes

Program Settings