Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0147600 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.9e-241 838.2 434 100.0
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-135 486.9 494 60.1
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.0e-116 424.5 463 57.5
RhsimUnG0041700 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.0e-88 330.5 404 54.0
Rhsim06G0104000 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.5e-85 319.3 390 51.0
RhsimUnG0063700 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.0e-80 303.9 321 55.1
Rhsim01G0051400 Rhododendron simsii HOM05D007798 ORTHO05D023239 7.5e-80 302.0 166 91.0
Rhsim07G0152100 Rhododendron simsii HOM05D007798 ORTHO05D023239 3.1e-78 296.6 166 92.2
Rhsim02G0157700 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.7e-76 290.8 167 88.6
Rhsim11G0003100 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.7e-74 282.7 330 53.9
Rhsim09G0076000 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.0e-73 280.0 167 85.0
Actinidia03841 Actinidia chinensis HOM05D007798 ORTHO05D009882 8.3e-63 245.4 405 40.2
Rhsim06G0086000 Rhododendron simsii HOM05D007798 ORTHO05D023239 7.3e-59 232.3 129 91.5
Rhsim02G0017800 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.0e-53 214.2 456 35.5
Rhsim02G0156500 Rhododendron simsii HOM05D007798 ORTHO05D023239 1.5e-51 208.0 114 91.2
Actinidia04231 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.4e-49 201.4 423 34.3
Rhsim11G0007300 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.1e-46 189.9 475 32.0
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 7.3e-43 179.1 437 31.8
Rhsim03G0043500 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.4e-40 169.9 129 78.3
Rhsim05G0212100 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.4e-40 169.9 343 34.4
RhsimUnG0025000 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.7e-39 167.9 354 33.6
Rhsim01G0063300 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.7e-36 157.9 471 29.7
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 8.6e-36 155.6 424 30.0
Rhsim01G0150700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.5e-35 154.8 403 32.0
Rhsim11G0015900 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.9e-30 137.9 448 29.0
Rhsim03G0060900 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.2e-30 137.1 418 29.9
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 2.3e-28 131.0 408 28.9
Actinidia33688 Actinidia chinensis HOM05D007798 ORTHO05D009882 5.1e-28 129.8 212 36.3
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.1e-28 129.8 200 38.0
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 8.7e-28 129.0 200 37.5
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 8.7e-28 129.0 200 37.5
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 8.7e-28 129.0 200 37.5
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 8.7e-28 129.0 200 37.5
Rhsim01G0022000 Rhododendron simsii HOM05D007798 ORTHO05D009882 8.7e-28 129.0 108 67.6
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.3e-27 126.7 200 37.0
Actinidia38754 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.3e-26 125.2 316 36.7
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 8.1e-26 122.5 200 35.5
Actinidia39405 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.5e-24 118.2 109 55.0
Rhsim01G0155300 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.6e-24 115.9 71 84.5
QL04p082690 Quercus lobata HOM05D007798 ORTHO05D009882 3.2e-22 110.5 177 33.9
Rhsim02G0160200 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.2e-21 108.6 144 47.2
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 1.7e-20 104.8 374 25.7
QL05p075545 Quercus lobata HOM05D007798 ORTHO05D009882 2.5e-19 100.9 178 30.9
Actinidia07485 Actinidia chinensis HOM05D007798 ORTHO05D009882 3.3e-19 100.5 291 32.3
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 3.3e-19 100.5 178 31.5
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 2.1e-18 97.8 387 26.4
Actinidia36705 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.8e-18 97.4 84 54.8
Hma1.2p1_0101F.1_g049380 Hydrangea macrophylla HOM05D005507 ORTHO05D009882 8.1e-18 95.9 172 32.6
QL93p0053_0646 Quercus lobata HOM05D007798 ORTHO05D009882 9.0e-17 92.4 354 25.4
Rhsim06G0139800 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.6e-16 90.9 103 50.5
QL05p029849 Quercus lobata HOM05D007798 ORTHO05D009882 1.4e-14 85.1 82 46.3
Rhsim11G0005600 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.2e-13 82.0 157 34.4
Rhsim02G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.6e-13 81.6 77 74.0
Rhsim06G0087700 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.1e-13 81.3 73 56.2
Hma1.2p1_0613F.1_g189140 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 1.3e-12 78.6 175 30.3
Rhsim02G0156600 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.1e-12 76.6 38 86.8
Rhsim11G0017600 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.1e-12 76.6 91 49.5
Rhsim05G0119300 Rhododendron simsii HOM05D019892 ORTHO05D023103 8.1e-10 69.3 88 50.0
Actinidia20115 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.8e-09 68.2 69 55.1
vmacro12525 Vaccinium macrocarpon HOM05D007798 ORTHO05D009882 2.4e-09 67.8 181 32.6
Actinidia22667 Actinidia chinensis HOM05D002634 ORTHO05D003100 3.1e-09 67.4 57 64.9
Rhsim10G0117300 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.5e-08 65.1 74 45.9
QL05p010144 Quercus lobata HOM05D006233 ORTHO05D007247 5.8e-08 63.2 77 49.4
Actinidia03840 Actinidia chinensis HOM05D007798 ORTHO05D023239 3.8e-07 60.5 99 39.4
Actinidia22917 Actinidia chinensis HOM05D007798 ORTHO05D009882 4.9e-07 60.1 92 55.4
Hma1.2p1_0849F.1_g228030 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 8.4e-07 59.3 142 28.2
Hma1.2p1_0000F.1_g001080 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.1e-06 58.9 82 34.1
Rhsim09G0073700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.9e-06 58.2 172 30.2
CSS0000180 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 3.2e-06 57.4 86 32.6
CSS0007712 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 3.2e-06 57.4 88 30.7
CSS0042483 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 3.2e-06 57.4 86 32.6
Dinv11320 Davidia involucrata HOM05D000791 ORTHO05D000669 3.2e-06 57.4 98 32.7
Rhsim04G0111400 Rhododendron simsii HOM05D009565 ORTHO05D012252 9.3e-06 55.8 133 28.6


User provided reference genes

Program Settings