Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 3.7e-312 1074.7 538 100.0
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 1.4e-128 464.2 531 54.0
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 3.1e-120 436.4 534 50.4
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 7.7e-119 431.8 528 50.6
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 2.9e-118 429.9 533 50.5
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 4.7e-116 422.5 531 49.9
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 1.2e-114 417.9 529 47.8
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 1.5e-114 417.5 532 47.9
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 1.5e-114 417.5 528 49.4
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 9.8e-114 414.8 536 48.5
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 9.8e-114 414.8 531 46.5
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 9.8e-114 414.8 528 47.9
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 1.3e-113 414.5 528 48.3
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 2.2e-113 413.7 531 48.2
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 3.7e-113 412.9 528 48.1
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 3.2e-112 409.8 528 49.1
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 7.0e-112 408.7 531 48.2
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 1.2e-111 407.9 528 46.8
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 2.7e-111 406.8 528 49.1
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 2.7e-111 406.8 531 47.3
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 3.5e-111 406.4 528 48.9
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 3.5e-111 406.4 528 48.9
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 5.9e-111 405.6 539 48.2
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 1.7e-110 404.1 525 47.6
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 1.7e-110 404.1 528 47.3
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 1.7e-110 404.1 531 47.8
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 2.9e-110 403.3 528 47.3
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 6.6e-110 402.1 531 45.6
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 8.6e-110 401.7 528 47.5
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 8.6e-110 401.7 529 47.3
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 8.6e-110 401.7 528 47.9
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 8.6e-110 401.7 528 47.9
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 1.1e-109 401.4 527 47.6
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 1.9e-109 400.6 525 47.6
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 2.5e-109 400.2 528 46.8
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 2.5e-109 400.2 528 47.7
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 4.3e-109 399.4 529 47.6
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 1.6e-108 397.5 535 47.7
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 1.6e-108 397.5 528 47.3
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 1.6e-108 397.5 527 47.4
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 2.8e-108 396.7 529 45.2
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 6.2e-108 395.6 498 46.2
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 6.2e-108 395.6 527 46.5
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 8.0e-108 395.2 527 46.7
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 1.8e-107 394.0 530 46.0
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 1.8e-107 394.0 529 47.4
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 2.3e-107 393.7 527 47.2
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 1.2e-106 391.3 531 45.4
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 2.0e-106 390.6 531 46.9
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 4.4e-106 389.4 527 45.7
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 5.8e-106 389.0 609 42.7
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 1.7e-105 387.5 531 46.1
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 6.4e-105 385.6 531 45.4
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 6.4e-105 385.6 530 45.7
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 8.3e-105 385.2 531 45.8
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 8.3e-105 385.2 529 45.0
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 1.4e-104 384.4 531 45.2
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 1.4e-104 384.4 531 45.2
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 1.9e-104 384.0 533 43.9
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 2.4e-104 383.6 531 45.4
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 2.4e-104 383.6 531 44.6
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 2.4e-104 383.6 546 42.3
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 3.2e-104 383.3 528 44.9
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 4.1e-104 382.9 531 45.8
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 4.1e-104 382.9 528 43.6
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 5.4e-104 382.5 531 45.0
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 7.0e-104 382.1 531 45.0
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 7.0e-104 382.1 529 45.9
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 9.2e-104 381.7 531 45.4
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 1.2e-103 381.3 531 45.0
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 2.0e-103 380.6 528 43.0
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 3.5e-103 379.8 531 45.0
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 7.8e-103 378.6 531 44.8
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 7.8e-103 378.6 525 44.0
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 1.0e-102 378.3 529 45.9
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 1.7e-102 377.5 528 42.4
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 1.2e-100 371.3 377 56.0
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 1.2e-100 371.3 528 46.2
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 6.8e-99 365.5 371 56.3
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 6.4e-97 359.0 525 43.2
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 1.4e-96 357.8 529 44.8
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 2.4e-96 357.1 555 43.8
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 1.6e-95 354.4 402 52.2
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 2.1e-95 354.0 526 42.8
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 6.0e-95 352.4 495 46.3
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 6.6e-94 349.0 528 43.8
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 1.4e-91 341.3 527 42.1
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 7.1e-88 328.9 510 39.0
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 2.7e-87 327.0 500 40.8
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 3.0e-86 323.6 375 51.5
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 3.6e-84 316.6 511 38.7
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 3.1e-83 313.5 528 41.1
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 9.3e-80 302.0 375 45.1
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 1.1e-77 295.0 534 38.0
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 3.6e-76 290.0 529 39.7
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 6.4e-73 279.3 528 38.3
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 6.0e-71 272.7 325 49.2
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 7.9e-71 272.3 310 51.3
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 4.3e-69 266.5 397 45.3
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 1.6e-68 264.6 255 60.8
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 8.1e-60 235.7 283 48.4
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 6.3e-52 209.5 187 57.8
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 7.9e-47 192.6 524 33.2
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 2.5e-40 171.0 253 39.9
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 1.0e-38 165.6 424 29.5
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 6.7e-38 162.9 254 41.3
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 6.9e-35 152.9 78 93.6
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 3.8e-33 147.1 383 30.8
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 7.9e-31 139.4 139 50.4
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 1.3e-28 132.1 381 30.7
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.3e-28 132.1 253 34.8
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 3.5e-26 124.0 74 82.4
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 2.2e-25 121.3 378 29.1
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 8.5e-25 119.4 78 71.8
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 1.3e-20 105.5 54 88.9
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.6e-18 98.6 65 70.8
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 2.1e-15 88.2 56 83.9
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 2.0e-10 71.6 38 81.6
MELO3C033538.2 Cucumis melo HOM05D006459 ORTHO05D169875 8.8e-06 56.2 31 80.6


User provided reference genes

Program Settings