Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0144400 Rhododendron simsii HOM05D017760 ORTHO05D004107 2.0e-99 365.9 204 100.0
RhsimUnG0197100 Rhododendron simsii HOM05D017760 ORTHO05D004107 5.3e-44 181.8 180 66.1
RhsimUnG0221800 Rhododendron simsii HOM05D017760 ORTHO05D004107 3.4e-43 179.1 180 65.6
Rhsim09G0083700 Rhododendron simsii HOM05D017760 ORTHO05D004107 6.3e-37 158.3 167 48.5
Rhsim09G0032500 Rhododendron simsii HOM05D017760 ORTHO05D004107 1.1e-36 157.5 158 62.7
Rhsim03G0178800 Rhododendron simsii HOM05D017760 ORTHO05D004107 6.7e-23 111.7 104 58.7
Rhsim10G0132100 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.1e-17 94.4 147 49.0
Dinv32175 Davidia involucrata HOM05D015629 ORTHO05D004107 9.7e-14 81.3 119 37.0
Hma1.2p1_1218F.1_g267660 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.7e-13 79.3 96 43.8
Hma1.2p1_0472F.1_g159930 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.1e-12 76.3 108 38.9
Dinv05647 Davidia involucrata HOM05D009581 ORTHO05D004107 5.3e-12 75.5 105 35.2
Dinv14622 Davidia involucrata HOM05D015629 ORTHO05D004107 3.5e-11 72.8 96 39.6
Peaxi162Scf00011g00432 Petunia axillaris HOM05D024655 ORTHO05D025895 1.0e-10 71.2 190 32.6
Dinv29333 Davidia involucrata HOM05D000017 ORTHO05D000013 1.7e-10 70.5 91 39.6
Dinv14020 Davidia involucrata HOM05D009581 ORTHO05D004107 5.0e-10 68.9 98 34.7
Rhsim02G0022000 Rhododendron simsii HOM05D009581 ORTHO05D004107 5.0e-10 68.9 98 38.8
Rhsim12G0183900 Rhododendron simsii HOM05D009581 ORTHO05D004107 5.0e-10 68.9 98 38.8
Dinv09274 Davidia involucrata HOM05D009581 ORTHO05D004107 1.5e-09 67.4 105 33.3
Dinv22725 Davidia involucrata HOM05D009581 ORTHO05D004107 1.5e-09 67.4 92 37.0
Nitab4.5_0005309g0020 Nicotiana tabacum HOM05D024655 ORTHO05D025895 2.5e-09 66.6 96 36.5
Dinv39745 Davidia involucrata HOM05D009581 ORTHO05D004107 9.4e-09 64.7 158 30.4
Dinv41030 Davidia involucrata HOM05D009581 ORTHO05D004107 1.2e-08 64.3 158 29.7
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 2.1e-08 63.5 108 34.3
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 2.1e-08 63.5 108 34.3
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 2.1e-08 63.5 99 36.4
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 2.7e-08 63.2 108 34.3
Nitab4.5_0000039g0090 Nicotiana tabacum HOM05D024655 ORTHO05D025895 3.6e-08 62.8 95 40.0
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 3.6e-08 62.8 108 34.3
Rhsim12G0071700 Rhododendron simsii HOM05D017760 ORTHO05D004107 8.0e-08 61.6 138 55.8
Rhsim01G0142000 Rhododendron simsii HOM05D009581 ORTHO05D004107 3.0e-07 59.7 91 34.1
Dinv03120 Davidia involucrata HOM05D009581 ORTHO05D004107 5.2e-07 58.9 90 36.7
Hma1.2p1_0542F.1_g174870 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.2e-07 58.9 101 32.7
Hma1.2p1_0936F.1_g238946 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.2e-07 58.9 101 32.7
Hma1.2p1_0936F.1_g238949 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.2e-07 58.9 101 32.7
Dinv15380 Davidia involucrata HOM05D009581 ORTHO05D004107 6.8e-07 58.5 189 28.6
Hma1.2p1_2873F.1_g329720 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.8e-07 58.2 93 30.1
Sopen03g024100 Solanum pennellii HOM05D004064 ORTHO05D009909 8.8e-07 58.2 108 31.5
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 8.8e-07 58.2 109 33.9
Hma1.2p1_0192F.1_g083640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.2e-06 57.8 116 30.2
Hma1.2p1_0257F.1_g103480 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.2e-06 57.8 89 34.8
Rhsim08G0179400 Rhododendron simsii HOM05D009581 ORTHO05D004107 1.2e-06 57.8 108 34.3
Dinv03803 Davidia involucrata HOM05D009581 ORTHO05D004107 1.5e-06 57.4 174 28.7
RhsimUnG0208000 Rhododendron simsii HOM05D008850 ORTHO05D004107 1.5e-06 57.4 125 26.4
Hma1.2p1_0026F.1_g016405 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.0e-06 57.0 93 33.3
Hma1.2p1_0292F.1_g115670 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.0e-06 57.0 93 33.3
Hma1.2p1_0438F.1_g153120 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.0e-06 57.0 186 25.3
Hma1.2p1_1233F.1_g268990 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.0e-06 57.0 93 33.3
Hma1.2p1_1314F.1_g275035 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.0e-06 57.0 93 33.3
Sopen03g028020 Solanum pennellii HOM05D004064 ORTHO05D009909 2.0e-06 57.0 111 32.4
Hma1.2p1_0046F.1_g027230 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.4e-06 55.8 95 29.5
Solyc04g039737.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 5.7e-06 55.5 102 32.4
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 7.5e-06 55.1 102 32.4
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 7.5e-06 55.1 102 32.4
Sopen07g020390 Solanum pennellii HOM05D000017 ORTHO05D011910 7.5e-06 55.1 102 32.4
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 7.5e-06 55.1 102 32.4
PGSC0003DMG400043109 Solanum tuberosum HOM05D004064 ORTHO05D009909 9.8e-06 54.7 99 32.3


User provided reference genes

Program Settings