Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0136300 Rhododendron simsii HOM05D017301 ORTHO05D000669 5.6e-141 504.2 245 100.0
Rhsim03G0202300 Rhododendron simsii HOM05D017301 ORTHO05D000669 2.0e-114 416.0 226 89.8
vmacro01281 Vaccinium macrocarpon HOM05D017301 ORTHO05D000669 5.5e-88 328.2 233 69.1
Rhsim04G0140200 Rhododendron simsii HOM05D017301 ORTHO05D000669 1.3e-60 237.3 150 80.7
Rhsim11G0020900 Rhododendron simsii HOM05D017301 ORTHO05D000669 1.2e-58 230.7 185 63.2
Rhsim10G0150700 Rhododendron simsii HOM05D017301 ORTHO05D000669 3.7e-36 156.0 172 48.8
CSS0000180 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 2.1e-23 113.6 182 39.0
CSS0042483 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 2.1e-23 113.6 182 39.0
CSS0007712 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 2.6e-21 106.7 183 38.3
CSS0028785 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 1.6e-15 87.4 132 39.4
Dinv13764 Davidia involucrata HOM05D011313 ORTHO05D013316 6.2e-15 85.5 206 25.7
CSS0034948 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 9.9e-13 78.2 155 34.8
CSS0036251 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 6.4e-12 75.5 79 50.6
RhsimUnG0071600 Rhododendron simsii HOM05D035565 ORTHO05D000669 1.1e-11 74.7 53 79.2
CSS0003368 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 1.4e-11 74.3 79 50.6
CSS0006742 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 1.4e-11 74.3 79 50.6
CSS0045093 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 1.4e-11 74.3 79 50.6
CSS0037282 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 3.2e-11 73.2 79 50.6
CSS0009901 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 7.1e-11 72.0 79 49.4
CSS0019405 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 1.2e-10 71.2 79 49.4
MBI05_g08210_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.8e-10 68.6 241 22.4
Rhsim12G0092900 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.3e-09 67.8 165 30.9
Dinv11320 Davidia involucrata HOM05D000791 ORTHO05D000669 3.0e-09 66.6 153 27.5
MBI08_g37905_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.0e-09 66.6 229 24.0
EL10Ac3g06519 Beta vulgaris HOM05D008455 ORTHO05D009597 5.1e-09 65.9 201 27.4
COL.COLO4_16289 Corchorus olitorius HOM05D059948 ORTHO05D010661 8.7e-09 65.1 150 28.0
MELO3C030283.2 Cucumis melo HOM05D001963 ORTHO05D001863 8.7e-09 65.1 155 25.8
MELO3C028240.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.9e-08 63.9 128 28.1
MBI19_g46209_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.5e-08 63.5 186 25.3
Manes.06G115750 Manihot esculenta HOM05D009290 ORTHO05D009597 2.5e-08 63.5 165 30.3
MBI14_g25533_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.3e-08 63.2 212 21.7
MBI01_g39588_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.6e-08 62.4 176 24.4
MBI12_g43234_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.6e-08 61.6 166 22.3
Peaxi162Scf00250g00511 Petunia axillaris HOM05D003120 ORTHO05D003568 9.6e-08 61.6 140 25.7
RcHm_v2.0_Chr3g0486961 Rosa chinensis HOM05D008705 ORTHO05D000669 9.6e-08 61.6 224 26.8
MBI19_g18851_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.3e-07 61.2 212 20.8
MBI19_g18856_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.3e-07 61.2 212 20.8
MBI19_g27593_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.3e-07 61.2 164 22.0
RcHm_v2.0_Chr1g0381191 Rosa chinensis HOM05D008705 ORTHO05D000669 1.3e-07 61.2 179 27.4
MELO3C033515.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.6e-07 60.8 190 24.7
MBI07_g41667_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.6e-07 60.8 212 21.2
MBI16_g20833_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.6e-07 60.8 212 21.7
RcHm_v2.0_Chr7g0214031 Rosa chinensis HOM05D008705 ORTHO05D000669 1.6e-07 60.8 179 27.4
MBI14_g01819_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.1e-07 60.5 212 21.2
RcHm_v2.0_Chr4g0385011 Rosa chinensis HOM05D008705 ORTHO05D000669 2.1e-07 60.5 180 26.1
RcHm_v2.0_Chr4g0410891 Rosa chinensis HOM05D008705 ORTHO05D000669 2.1e-07 60.5 180 26.1
COL.COLO4_19832 Corchorus olitorius HOM05D015286 ORTHO05D000669 2.8e-07 60.1 137 25.5
MELO3C028156.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.8e-07 60.1 127 28.3
MBI19_g01025_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.8e-07 60.1 167 22.2
PSO732G0435 Papaver somniferum HOM05D000791 ORTHO05D000669 2.8e-07 60.1 166 25.9
Peaxi162Scf00085g00199 Petunia axillaris HOM05D003120 ORTHO05D003568 2.8e-07 60.1 172 25.0
EL10Ac2g03454 Beta vulgaris HOM05D008455 ORTHO05D009597 3.6e-07 59.7 177 27.1
MBI14_g16528_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.6e-07 59.7 165 21.8
MELO3C029644.2 Cucumis melo HOM05D001963 ORTHO05D001863 4.8e-07 59.3 194 24.7
EL10Ac2g03097 Beta vulgaris HOM05D008455 ORTHO05D009597 6.2e-07 58.9 180 29.4
EL10Ac2g03816 Beta vulgaris HOM05D008455 ORTHO05D009597 6.2e-07 58.9 196 25.5
MELO3C030180.2 Cucumis melo HOM05D001963 ORTHO05D001863 6.2e-07 58.9 131 28.2
MBI11_g33696_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.2e-07 58.9 166 21.7
MBI13_g26213_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.2e-07 58.9 212 20.8
Rhsim01G0150700 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.2e-07 58.9 207 27.1
PGSC0003DMG400002416 Solanum tuberosum HOM05D008892 ORTHO05D010661 6.2e-07 58.9 141 31.2
Peaxi162Scf00524g00083 Petunia axillaris HOM05D003120 ORTHO05D003568 8.1e-07 58.5 172 24.4
PGSC0003DMG400034893 Solanum tuberosum HOM05D008892 ORTHO05D010661 8.1e-07 58.5 141 31.2
EL10Ac4g08902 Beta vulgaris HOM05D008455 ORTHO05D009597 1.1e-06 58.2 180 29.4
CAN.G475.41 Capsicum annuum HOM05D008892 ORTHO05D010661 1.1e-06 58.2 112 29.5
Dinv04254 Davidia involucrata HOM05D008892 ORTHO05D010661 1.1e-06 58.2 80 27.5
Dinv09482 Davidia involucrata HOM05D008892 ORTHO05D010661 1.1e-06 58.2 80 27.5
MBI13_g12520_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.1e-06 58.2 208 21.6
CiPaw.10G087600 Carya illinoinensis HOM05D001309 ORTHO05D000385 1.4e-06 57.8 146 27.4
MELO3C031804.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.4e-06 57.8 221 24.4
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 1.4e-06 57.8 167 26.9
CiPaw.09G181600 Carya illinoinensis HOM05D001309 ORTHO05D000385 1.8e-06 57.4 164 27.4
Peaxi162Scf00296g00108 Petunia axillaris HOM05D003120 ORTHO05D003568 1.8e-06 57.4 151 24.5
QL05p002086 Quercus lobata HOM05D008595 ORTHO05D000385 1.8e-06 57.4 165 30.3
Rhsim01G0157700 Rhododendron simsii HOM05D000791 ORTHO05D000669 1.8e-06 57.4 182 25.8
Rhsim10G0097100 Rhododendron simsii HOM05D000791 ORTHO05D000669 1.8e-06 57.4 182 25.8
EL10Ac6g13954 Beta vulgaris HOM05D008455 ORTHO05D009597 2.4e-06 57.0 164 28.7
CiPaw.16G058400 Carya illinoinensis HOM05D001309 ORTHO05D000385 2.4e-06 57.0 146 27.4
CiPaw.16G105200 Carya illinoinensis HOM05D001309 ORTHO05D000385 2.4e-06 57.0 146 27.4
MBI07_g22513_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.4e-06 57.0 218 20.6
MBI08_g40514_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.4e-06 57.0 202 21.3
MBI13_g41510_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.4e-06 57.0 194 22.7
PSO724G1017 Papaver somniferum HOM05D000791 ORTHO05D000669 2.4e-06 57.0 208 24.0
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.1e-06 56.6 195 25.6
MBI05_g11193_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.1e-06 56.6 166 21.7
MBI11_g23002_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.1e-06 56.6 212 19.8
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.0e-06 56.2 195 25.6
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.0e-06 56.2 195 25.6
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.0e-06 56.2 195 25.6
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.0e-06 56.2 195 25.6
MELO3C029233.2 Cucumis melo HOM05D001963 ORTHO05D001863 4.0e-06 56.2 127 26.8
MELO3C034470.2 Cucumis melo HOM05D001963 ORTHO05D001863 4.0e-06 56.2 184 24.5
FAN10G2090 Fragaria x ananassa HOM05D008705 ORTHO05D000669 4.0e-06 56.2 180 25.0
MBI18_g20995_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.0e-06 56.2 201 21.4
QL04p082690 Quercus lobata HOM05D007798 ORTHO05D009882 4.0e-06 56.2 153 27.5
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 4.0e-06 56.2 145 26.2
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.0e-06 56.2 138 25.4
CSS0008322 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 5.3e-06 55.8 60 40.0
CSS0015286 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 5.3e-06 55.8 66 40.9
MBI09_g42525_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.3e-06 55.8 166 21.1
MBI11_g21812_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.3e-06 55.8 163 21.5
PSO675G3471 Papaver somniferum HOM05D000791 ORTHO05D000669 5.3e-06 55.8 166 25.9
MELO3C034455.2 Cucumis melo HOM05D001963 ORTHO05D001863 6.9e-06 55.5 127 27.6
vmacro12141 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 6.9e-06 55.5 187 26.7
CSS0014258 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 9.0e-06 55.1 60 40.0
CSS0020249 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 9.0e-06 55.1 60 40.0
CSS0020818 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 9.0e-06 55.1 60 40.0
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 9.0e-06 55.1 195 25.6
FAN10G3855 Fragaria x ananassa HOM05D008705 ORTHO05D000669 9.0e-06 55.1 180 24.4
MBI15_g01162_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.0e-06 55.1 163 21.5
Nitab4.5_0008225g0020 Nicotiana tabacum HOM05D003120 ORTHO05D003568 9.0e-06 55.1 158 24.7
Peaxi162Scf00010g00918 Petunia axillaris HOM05D003120 ORTHO05D003568 9.0e-06 55.1 190 20.0
vmacro13356 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 9.0e-06 55.1 138 31.9


User provided reference genes

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