Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0134600 Rhododendron simsii HOM05D007447 ORTHO05D009372 5.4e-151 537.7 288 100.0
CSS0015196 Camellia sinensis var. sinensis HOM05D007447 ORTHO05D009372 1.8e-66 256.9 301 53.8
vmacro15930 Vaccinium macrocarpon HOM05D007447 ORTHO05D009372 9.4e-63 244.6 247 59.5
Actinidia07600 Actinidia chinensis HOM05D007447 ORTHO05D009372 2.1e-62 243.4 285 55.8
Dinv40599 Davidia involucrata HOM05D007447 ORTHO05D009372 1.0e-53 214.5 296 48.6
TAR627G0071 Trochodendron aralioides HOM05D007447 ORTHO05D009372 4.8e-43 179.1 291 41.6
GSVIVG01021110001 Vitis vinifera HOM05D007447 ORTHO05D009372 1.4e-42 177.6 247 45.3
COL.COLO4_31413 Corchorus olitorius HOM05D001455 ORTHO05D001587 1.6e-38 164.1 254 43.3
QL05p042219 Quercus lobata HOM05D007447 ORTHO05D009372 2.8e-38 163.3 258 40.7
Thecc.06G181300 Theobroma cacao HOM05D007447 ORTHO05D009372 3.6e-38 162.9 260 41.5
Nn1g06424 Nelumbo nucifera HOM05D007447 ORTHO05D009372 4.7e-38 162.5 296 39.5
CiPaw.10G052600 Carya illinoinensis HOM05D007447 ORTHO05D009372 8.8e-37 158.3 250 40.0
Nitab4.5_0001955g0160 Nicotiana tabacum HOM05D007447 ORTHO05D009372 9.8e-36 154.8 296 35.8
Eucgr.E03244 Eucalyptus grandis HOM05D007447 ORTHO05D009372 2.4e-34 150.2 291 36.4
Gorai.011G030100 Gossypium raimondii HOM05D007447 ORTHO05D009372 2.4e-34 150.2 268 37.7
Atru.chr10.1800 Acer truncatum HOM05D007447 ORTHO05D009372 4.1e-34 149.4 286 39.2
MSTRG.14713 Avicennia marina HOM05D007447 ORTHO05D009372 9.2e-34 148.3 295 37.3
Gohir.D10G028300 Gossypium hirsutum HOM05D007447 ORTHO05D009372 1.2e-33 147.9 268 37.7
COL.COLO4_14300 Corchorus olitorius HOM05D001061 ORTHO05D006729 2.7e-33 146.7 259 40.9
Haze_06385 Corylus avellana HOM05D007882 ORTHO05D009870 4.5e-33 146.0 305 35.7
FvH4_3g08660 Fragaria vesca HOM05D007447 ORTHO05D009372 7.8e-33 145.2 260 37.7
Nitab4.5_0004359g0010 Nicotiana tabacum HOM05D007882 ORTHO05D009870 2.5e-31 140.2 294 34.4
Migut.H01471 Erythranthe guttata HOM05D007447 ORTHO05D009372 4.3e-31 139.4 295 36.3
FAN16G2340 Fragaria x ananassa HOM05D007447 ORTHO05D009372 4.3e-31 139.4 247 38.1
Aqoxy1G02279 Aquilegia oxysepala HOM05D007447 ORTHO05D009372 7.3e-31 138.7 289 32.2
FAN21G3311 Fragaria x ananassa HOM05D001455 ORTHO05D001587 1.6e-30 137.5 244 38.5
Cpa.g.sc27.6 Carica papaya HOM05D007447 ORTHO05D009372 8.0e-30 135.2 282 35.5
Cfa000525 Carpinus fangiana HOM05D007447 ORTHO05D009372 8.0e-30 135.2 287 34.8
Oeu012152.1 Olea europaea HOM05D007447 ORTHO05D009372 8.0e-30 135.2 250 38.4
PGR042G0911 Punica granatum HOM05D007447 ORTHO05D009372 8.0e-30 135.2 296 32.8
Prupe.3G304000 Prunus persica HOM05D007447 ORTHO05D009372 1.0e-29 134.8 284 36.3
RcHm_v2.0_Chr5g0009131 Rosa chinensis HOM05D007447 ORTHO05D009372 1.0e-29 134.8 276 36.2
Ciclev10018161m.g Citrus clementina HOM05D007447 ORTHO05D009372 4.0e-29 132.9 152 48.7
Cc02_g13820 Coffea canephora HOM05D007447 ORTHO05D009372 1.2e-28 131.3 305 34.4
FAN11G2802 Fragaria x ananassa HOM05D007447 ORTHO05D009372 1.5e-28 131.0 295 34.6
SalBow7G4252 Salvia bowleyana HOM05D007447 ORTHO05D009372 3.4e-28 129.8 289 35.3
SalBow7G4859 Salvia bowleyana HOM05D007447 ORTHO05D009372 3.4e-28 129.8 289 35.3
Manes.16G031900 Manihot esculenta HOM05D007447 ORTHO05D009372 7.5e-28 128.6 292 34.9
TWI63G0216 Tripterygium wilfordii HOM05D007447 ORTHO05D009372 7.5e-28 128.6 299 33.8
HanXRQChr08g0213981 Helianthus annuus HOM05D007447 ORTHO05D009372 1.7e-27 127.5 230 37.4
MD10G1289400 Malus domestica HOM05D007447 ORTHO05D009372 1.7e-27 127.5 290 36.9
Hma1.2p1_0558F.1_g178510 Hydrangea macrophylla HOM05D007447 ORTHO05D009372 2.2e-27 127.1 132 54.5
Solyc02g077690.4 Solanum lycopersicum HOM05D007447 ORTHO05D009372 2.2e-27 127.1 294 31.3
Gohir.A09G104400 Gossypium hirsutum HOM05D007447 ORTHO05D009372 2.9e-27 126.7 262 35.5
CAN.G529.53 Capsicum annuum HOM05D007447 ORTHO05D009372 1.4e-26 124.4 144 48.6
ClCG03G008020 Citrullus lanatus HOM05D007447 ORTHO05D009372 1.8e-26 124.0 300 33.0
Gohir.A05G159100 Gossypium hirsutum HOM05D007447 ORTHO05D009372 1.8e-26 124.0 254 36.6
ECA248G3772 Erigeron canadensis HOM05D007447 ORTHO05D009372 1.2e-25 121.3 237 38.4
CANSAT35G0297 Cannabis sativa HOM05D007447 ORTHO05D009372 2.0e-25 120.6 251 33.5
PSO675G5366 Papaver somniferum HOM05D007447 ORTHO05D009372 2.0e-25 120.6 280 32.5
PSO675G8572 Papaver somniferum HOM05D007447 ORTHO05D009372 2.0e-25 120.6 280 32.5
CsaV3_1G012550 Cucumis sativus L. HOM05D007447 ORTHO05D009372 2.7e-25 120.2 264 32.2
Psat1g202800 Pisum sativum HOM05D007447 ORTHO05D009372 1.7e-24 117.5 256 32.8
Gohir.A10G027900 Gossypium hirsutum HOM05D007447 ORTHO05D009372 3.3e-23 113.2 220 36.4
unitig_61.g26088 Utricularia gibba HOM05D007447 ORTHO05D009372 1.6e-22 110.9 249 29.3
Aqoxy193s001 Aquilegia oxysepala HOM05D007447 ORTHO05D009372 2.1e-22 110.5 148 41.9
Sc17g0005950 Simmondsia chinensis HOM05D007447 ORTHO05D009372 2.8e-22 110.2 286 32.2
Thhalv10008438m.g Eutrema salsugineum HOM05D007447 ORTHO05D009372 1.0e-21 108.2 296 30.4
Lj6g0005430 Lotus japonicus HOM05D007447 ORTHO05D009372 1.0e-21 108.2 149 43.6
VMungo0540G1135 Vigna mungo HOM05D007447 ORTHO05D009372 3.1e-21 106.7 248 30.6
AL1G42040 Arabidopsis lyrata HOM05D007447 ORTHO05D009372 6.8e-21 105.5 273 31.1
AT1G28410 Arabidopsis thaliana HOM05D007447 ORTHO05D009372 8.9e-21 105.1 274 31.0
Ca_00359_v3 Cicer arietinum L. HOM05D007447 ORTHO05D009372 1.5e-20 104.4 132 44.7
Sabra04G0030400 Salix brachista HOM05D007882 ORTHO05D009870 1.5e-20 104.4 289 31.1
Sp1g24690 Schrenkiella parvula HOM05D007447 ORTHO05D009372 1.5e-20 104.4 297 29.6
Sed0019225 Sechium edule HOM05D007447 ORTHO05D009372 3.4e-20 103.2 299 30.4
Duzib160G0617 Durio zibethinus HOM05D007447 ORTHO05D009372 9.8e-20 101.7 295 33.6
Glyma.13G235800 Glycine max HOM05D007447 ORTHO05D009372 1.3e-19 101.3 270 29.3
DCAR_008005 Daucus carota HOM05D007447 ORTHO05D009372 1.7e-19 100.9 157 40.1
Carub.0001s2689 Capsella rubella HOM05D007447 ORTHO05D009372 2.9e-19 100.1 290 31.0
Lsat_1_v5_gn_1_120761 Lactuca sativa HOM05D007447 ORTHO05D009372 3.7e-19 99.8 266 33.1
CARHR027920 Cardamine hirsuta HOM05D007447 ORTHO05D009372 6.4e-19 99.0 296 28.7
Medtr2g014440 Medicago truncatula HOM05D007447 ORTHO05D009372 8.3e-19 98.6 147 39.5
arahy.Tifrunner.gnm1.ann1.45S4HY Arachis hypogaea HOM05D007447 ORTHO05D009372 1.4e-18 97.8 260 30.0
arahy.Tifrunner.gnm1.ann1.MUCA0D Arachis hypogaea HOM05D007447 ORTHO05D009372 1.4e-18 97.8 260 30.0
TPR.G11645 Trifolium pratense HOM05D007447 ORTHO05D009372 1.4e-18 97.8 137 40.9
Phvul.006G182400 Phaseolus vulgaris HOM05D007447 ORTHO05D009372 7.0e-18 95.5 139 43.2
Sopen02g022590 Solanum pennellii HOM05D007447 ORTHO05D009372 2.7e-17 93.6 294 27.9
THA.LOC104814436 Tarenaya hassleriana HOM05D007447 ORTHO05D009372 4.6e-17 92.8 266 28.2
CDE04G0034 Ceratophyllum demersum HOM05D002561 ORTHO05D006466 1.5e-15 87.8 125 40.8
Hund23805 Selenicereus undatus HOM05D007447 ORTHO05D009372 1.9e-15 87.4 247 29.6
C05p27420 Brassica napus HOM05D007447 ORTHO05D009372 4.3e-15 86.3 132 37.1
BolC5t31458H Brassica oleracea HOM05D007447 ORTHO05D009372 4.3e-15 86.3 132 37.1
MELO3C000075.2 Cucumis melo HOM05D007447 ORTHO05D009372 4.3e-15 86.3 193 33.2
BcaC05g26860 Brassica carinata HOM05D007447 ORTHO05D009372 1.2e-14 84.7 132 36.4
A09p37630 Brassica napus HOM05D007447 ORTHO05D009372 2.8e-14 83.6 132 36.4
BraA09t39273Z Brassica rapa HOM05D007447 ORTHO05D009372 2.8e-14 83.6 132 36.4
EL10Ac8g20436 Beta vulgaris HOM05D007447 ORTHO05D009372 4.7e-14 82.8 263 27.4
Peaxi162Scf00926g00028 Petunia axillaris HOM05D007447 ORTHO05D009372 1.4e-13 81.3 253 28.5
AUR62014866 Chenopodium quinoa HOM05D007447 ORTHO05D009372 8.9e-13 78.6 296 24.7
Ah.09g237570 Amaranthus hybridus HOM05D007447 ORTHO05D009372 2.0e-12 77.4 269 24.9
Os02g0305600 Oryza sativa ssp. japonica HOM05D007447 ORTHO05D009372 5.8e-12 75.9 246 26.4
MBI06_g04396_MAGBIO Magnolia biondii HOM05D007447 ORTHO05D009372 7.5e-12 75.5 225 29.8
ATR0730G049 Amborella trichopoda HOM05D007447 ORTHO05D009372 9.8e-12 75.1 254 28.3
Lalb_Chr18g0059391 Lupinus albus HOM05D007447 ORTHO05D009372 9.8e-12 75.1 284 25.0


User provided reference genes

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