Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0134300 Rhododendron simsii HOM05D007160 ORTHO05D005331 8.0e-132 474.2 315 100.0
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 5.9e-18 95.9 335 40.6
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 1.4e-14 84.7 209 35.9
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 6.3e-12 75.9 138 46.4
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 8.2e-12 75.5 354 36.4
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.1e-11 75.1 196 41.8
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 4.1e-11 73.2 180 37.2
MSTRG.15854 Avicennia marina HOM05D007160 ORTHO05D005331 9.1e-11 72.0 212 34.0
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 3.5e-10 70.1 109 48.6
Gorai.009G167000 Gossypium raimondii HOM05D007160 ORTHO05D005331 3.5e-10 70.1 221 34.8
FAN16G2322 Fragaria x ananassa HOM05D007160 ORTHO05D005331 4.5e-10 69.7 186 40.9
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 5.9e-10 69.3 142 41.5
Prupe.4G052200 Prunus persica HOM05D007160 ORTHO05D005331 5.9e-10 69.3 354 33.3
Rhsim13G0180200 Rhododendron simsii HOM05D007160 ORTHO05D005331 7.7e-10 68.9 323 32.8
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.0e-09 68.6 91 48.4
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 1.3e-09 68.2 180 35.0
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 1.7e-09 67.8 230 29.1
FvH4_3g08671 Fragaria vesca HOM05D007160 ORTHO05D005331 1.7e-09 67.8 193 39.9
FAN11G0877 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.7e-09 67.8 193 39.9
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 3.8e-09 66.6 182 35.7
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 3.8e-09 66.6 212 34.0
Gohir.D05G162000 Gossypium hirsutum HOM05D007160 ORTHO05D005331 5.0e-09 66.2 225 33.3
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 6.5e-09 65.9 209 38.3
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 6.5e-09 65.9 209 38.3
TAR627G1090 Trochodendron aralioides HOM05D018497 ORTHO05D005331 6.5e-09 65.9 204 33.3
Nitab4.5_0000516g0090 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.1e-08 65.1 109 43.1
Nitab4.5_0001375g0120 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.1e-08 65.1 108 42.6
PGSC0003DMG400022807 Solanum tuberosum HOM05D007160 ORTHO05D005331 1.9e-08 64.3 91 47.3
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 3.2e-08 63.5 202 30.2
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 4.2e-08 63.2 213 32.9
TAR629G2975 Trochodendron aralioides HOM05D018497 ORTHO05D021348 4.2e-08 63.2 154 36.4
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 5.5e-08 62.8 312 32.7
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 9.4e-08 62.0 108 43.5
Oeu001099.1 Olea europaea HOM05D007160 ORTHO05D005331 1.2e-07 61.6 199 33.7
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 1.6e-07 61.2 140 35.0
Nitab4.5_0003341g0030 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.6e-07 61.2 79 50.6
PGSC0003DMG400031775 Solanum tuberosum HOM05D007160 ORTHO05D005331 1.6e-07 61.2 80 51.2
CAN.G529.50 Capsicum annuum HOM05D007160 ORTHO05D005331 2.1e-07 60.8 92 47.8
Nitab4.5_0004359g0050 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.7e-07 60.5 197 33.0
Peaxi162Scf00926g00031 Petunia axillaris HOM05D007160 ORTHO05D005331 2.7e-07 60.5 79 48.1
Nitab4.5_0001955g0170 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.6e-07 60.1 202 35.6
Nitab4.5_0006098g0020 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.6e-07 60.1 81 49.4
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 4.7e-07 59.7 225 29.8
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 6.1e-07 59.3 347 27.1
CiPaw.09G063200 Carya illinoinensis HOM05D007160 ORTHO05D005331 1.0e-06 58.5 107 43.0
Manes.17G049000 Manihot esculenta HOM05D007160 ORTHO05D005331 1.0e-06 58.5 102 43.1
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 1.4e-06 58.2 161 34.8
Peaxi162Scf00031g00084 Petunia axillaris HOM05D007160 ORTHO05D005331 1.4e-06 58.2 187 32.6
Gohir.A10G027800 Gossypium hirsutum HOM05D007160 ORTHO05D005331 2.3e-06 57.4 177 33.9
Dinv40598 Davidia involucrata HOM05D007882 ORTHO05D009870 3.0e-06 57.0 287 39.4
Nitab4.5_0000516g0070 Nicotiana tabacum HOM05D007160 ORTHO05D005331 5.2e-06 56.2 108 39.8
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 5.2e-06 56.2 84 45.2
SalBow8G4606 Salvia bowleyana HOM05D007160 ORTHO05D005331 5.2e-06 56.2 84 45.2
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 5.2e-06 56.2 86 44.2


User provided reference genes

Program Settings