Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 7.7e-53 210.3 113 100.0
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 2.2e-44 182.2 111 89.2
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 2.1e-42 175.6 113 85.0
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 1.4e-41 172.9 113 82.3
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 4.0e-41 171.4 104 86.5
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 1.5e-40 169.5 113 83.2
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 3.8e-36 154.8 111 73.0
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 8.5e-36 153.7 103 80.6
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 1.5e-35 152.9 111 73.9
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 1.9e-35 152.5 111 73.0
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 4.2e-35 151.4 109 77.1
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 1.6e-34 149.4 103 78.6
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 2.8e-34 148.7 114 71.9
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 4.7e-34 147.9 102 77.5
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 4.7e-34 147.9 113 71.7
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 4.7e-34 147.9 108 73.1
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 1.0e-33 146.7 105 75.2
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 1.8e-33 146.0 113 68.1
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 1.8e-33 146.0 102 74.5
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 2.3e-33 145.6 111 72.1
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 3.0e-33 145.2 109 73.4
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 4.0e-33 144.8 113 70.8
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 4.0e-33 144.8 112 72.3
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 5.2e-33 144.4 103 73.8
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 5.2e-33 144.4 103 77.7
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 6.8e-33 144.1 103 70.9
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 1.2e-32 143.3 103 69.9
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 2.0e-32 142.5 113 69.9
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 4.4e-32 141.4 111 71.2
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 7.5e-32 140.6 103 72.8
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 9.8e-32 140.2 110 70.0
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 9.8e-32 140.2 112 67.9
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 1.3e-31 139.8 106 69.8
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 1.3e-31 139.8 106 69.8
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 1.3e-31 139.8 103 76.7
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 2.2e-31 139.0 104 76.0
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 2.8e-31 138.7 113 65.5
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 2.8e-31 138.7 107 70.1
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 3.7e-31 138.3 105 69.5
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 3.7e-31 138.3 110 69.1
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 3.7e-31 138.3 103 68.9
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 6.3e-31 137.5 104 71.2
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 6.3e-31 137.5 102 71.6
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 1.1e-30 136.7 110 67.3
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 1.8e-30 136.0 103 71.8
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 1.8e-30 136.0 105 70.5
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 2.4e-30 135.6 113 65.5
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 2.4e-30 135.6 113 65.5
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 2.4e-30 135.6 109 67.9
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 2.4e-30 135.6 110 67.3
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 3.1e-30 135.2 105 70.5
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 4.1e-30 134.8 109 67.9
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 4.1e-30 134.8 109 70.6
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 5.4e-30 134.4 100 73.0
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 5.4e-30 134.4 109 69.7
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 7.0e-30 134.0 102 70.6
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 7.0e-30 134.0 109 68.8
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 7.0e-30 134.0 102 72.5
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 1.2e-29 133.3 110 67.3
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 1.2e-29 133.3 102 71.6
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 1.6e-29 132.9 109 66.1
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 2.0e-29 132.5 103 69.9
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 2.7e-29 132.1 97 75.3
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 4.5e-29 131.3 83 88.0
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 1.7e-28 129.4 101 73.3
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 2.5e-27 125.6 102 65.7
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 3.3e-27 125.2 110 65.5
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 7.3e-27 124.0 103 66.0
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 1.6e-26 122.9 101 62.4
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 1.6e-26 122.9 105 61.9
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 3.6e-26 121.7 104 61.5
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 3.6e-26 121.7 105 60.0
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 4.7e-26 121.3 102 61.8
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 4.7e-26 121.3 103 63.1
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 1.8e-25 119.4 95 65.3
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 2.3e-25 119.0 112 61.6
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 4.4e-24 114.8 97 64.9
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 7.5e-24 114.0 102 55.9
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 7.5e-24 114.0 82 75.6
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 1.3e-23 113.2 83 77.1
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 2.2e-23 112.5 101 59.4
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 2.9e-23 112.1 101 59.4
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 2.9e-23 112.1 101 59.4
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 2.9e-23 112.1 101 59.4
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 3.7e-23 111.7 83 74.7
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 4.9e-23 111.3 100 62.0
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 8.3e-23 110.5 114 56.1
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 8.3e-23 110.5 154 46.1
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 1.1e-22 110.2 111 55.9
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 9.2e-22 107.1 128 49.2
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 1.2e-21 106.7 79 70.9
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 3.5e-21 105.1 95 61.1
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 4.6e-21 104.8 119 51.3
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 1.9e-19 99.4 66 77.3
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 9.5e-19 97.1 101 50.5
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 6.2e-18 94.4 69 73.9
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 1.1e-17 93.6 94 54.3
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 3.4e-16 88.6 79 57.0
Os07g0299600 Oryza sativa ssp. japonica HOM05D007285 ORTHO05D009224 7.5e-16 87.4 85 57.6
Pp3c8_510 Physcomitrium patens HOM05D007285 ORTHO05D009224 2.0e-13 79.3 100 44.0
Mapoly0007s0165 Marchantia polymorpha HOM05D007285 ORTHO05D009224 8.6e-12 73.9 110 40.9
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 1.9e-11 72.8 124 37.9
CDE12G0235 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 4.0e-09 65.1 93 44.1
SEGI_39568 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 3.2e-06 55.5 48 58.3
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 4.1e-06 55.1 65 46.2


User provided reference genes

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