Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 2.5e-50 201.8 103 100.0
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 9.5e-42 173.3 103 88.3
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 2.5e-34 148.7 81 93.8
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 2.3e-32 142.1 78 94.9
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 8.9e-32 140.2 81 87.7
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 7.5e-31 137.1 78 89.7
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 4.9e-30 134.4 81 84.0
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 9.2e-29 130.2 81 80.2
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 1.6e-28 129.4 79 82.3
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 2.1e-28 129.0 82 81.7
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 4.6e-28 127.9 81 81.5
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 6.0e-28 127.5 81 76.5
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 7.8e-28 127.1 79 82.3
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 7.8e-28 127.1 98 66.3
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 7.8e-28 127.1 81 79.0
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 2.3e-27 125.6 77 80.5
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 2.3e-27 125.6 77 80.5
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 3.0e-27 125.2 85 75.3
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 5.1e-27 124.4 79 78.5
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 6.6e-27 124.0 81 79.0
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 8.6e-27 123.6 81 79.0
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 8.6e-27 123.6 80 80.0
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 8.6e-27 123.6 103 64.1
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 1.1e-26 123.2 81 79.0
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 1.5e-26 122.9 81 79.0
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 1.9e-26 122.5 81 77.8
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 1.9e-26 122.5 77 77.9
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 2.5e-26 122.1 75 80.0
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 2.5e-26 122.1 76 81.6
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 2.5e-26 122.1 81 76.5
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 2.5e-26 122.1 76 80.3
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 2.5e-26 122.1 79 78.5
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 3.3e-26 121.7 81 77.8
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 3.3e-26 121.7 79 78.5
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 3.3e-26 121.7 80 76.2
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 4.3e-26 121.3 80 78.8
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 4.3e-26 121.3 83 77.1
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 5.6e-26 120.9 78 78.2
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 5.6e-26 120.9 79 75.9
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 7.3e-26 120.6 81 76.5
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 7.3e-26 120.6 81 76.5
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 9.5e-26 120.2 79 75.9
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 9.5e-26 120.2 77 77.9
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 9.5e-26 120.2 80 77.5
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 9.5e-26 120.2 79 77.2
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 9.5e-26 120.2 76 76.3
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 9.5e-26 120.2 80 77.5
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 1.2e-25 119.8 80 73.8
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 1.2e-25 119.8 79 74.7
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.6e-25 119.4 80 73.8
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.6e-25 119.4 80 73.8
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 1.6e-25 119.4 82 75.6
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 1.6e-25 119.4 81 75.3
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 1.6e-25 119.4 81 76.5
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 2.1e-25 119.0 81 76.5
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 2.1e-25 119.0 79 77.2
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 2.1e-25 119.0 92 67.4
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 2.8e-25 118.6 79 77.2
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 2.8e-25 118.6 70 80.0
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 4.7e-25 117.9 81 75.3
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 4.7e-25 117.9 72 81.9
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 4.7e-25 117.9 82 75.6
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 4.7e-25 117.9 78 78.2
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 4.7e-25 117.9 68 85.3
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 4.7e-25 117.9 66 86.4
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 6.2e-25 117.5 79 74.7
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 6.2e-25 117.5 79 73.4
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 8.1e-25 117.1 68 83.8
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 1.1e-24 116.7 79 77.2
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 1.1e-24 116.7 67 83.6
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 1.4e-24 116.3 90 67.8
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 1.8e-24 115.9 79 77.2
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 1.8e-24 115.9 79 73.4
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 2.4e-24 115.5 66 83.3
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 3.1e-24 115.2 68 80.9
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 3.1e-24 115.2 75 76.0
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 4.0e-24 114.8 75 74.7
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 5.2e-24 114.4 70 78.6
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 5.2e-24 114.4 81 70.4
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 5.2e-24 114.4 70 80.0
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 6.8e-24 114.0 70 78.6
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 6.8e-24 114.0 70 80.0
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 6.8e-24 114.0 68 82.4
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 6.8e-24 114.0 77 74.0
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 6.8e-24 114.0 77 74.0
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 6.8e-24 114.0 77 74.0
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 6.8e-24 114.0 68 79.4
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 6.8e-24 114.0 66 83.3
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 8.9e-24 113.6 66 83.3
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 8.9e-24 113.6 79 74.7
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 1.2e-23 113.2 68 80.9
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 1.2e-23 113.2 80 68.8
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 1.2e-23 113.2 77 74.0
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 1.5e-23 112.8 80 70.0
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 1.5e-23 112.8 65 80.0
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 2.6e-23 112.1 68 79.4
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 2.6e-23 112.1 68 79.4
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 3.4e-23 111.7 76 71.1
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 3.4e-23 111.7 64 82.8
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 4.4e-23 111.3 68 79.4
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 4.4e-23 111.3 86 68.6
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 5.8e-23 110.9 68 80.9
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 7.6e-23 110.5 81 69.1
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 7.6e-23 110.5 81 69.1
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 7.6e-23 110.5 79 72.2
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 9.9e-23 110.2 81 69.1
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 9.9e-23 110.2 81 69.1
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 9.9e-23 110.2 81 69.1
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 9.9e-23 110.2 81 69.1
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 9.9e-23 110.2 67 79.1
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 1.3e-22 109.8 68 77.9
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 2.9e-22 108.6 58 89.7
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 8.4e-22 107.1 62 80.6
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 1.4e-21 106.3 62 79.0
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 2.4e-21 105.5 71 73.2
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 7.1e-21 104.0 79 68.4
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 1.7e-19 99.4 74 67.6
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 1.9e-18 95.9 52 86.5
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 2.2e-14 82.4 63 65.1
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 4.9e-14 81.3 82 56.1
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 1.1e-13 80.1 64 57.8
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 1.9e-13 79.3 59 61.0
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 1.2e-12 76.6 81 56.8
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 1.6e-12 76.3 60 61.7
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 1.3e-11 73.2 62 64.5
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 3.0e-11 72.0 49 67.3
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 1.1e-10 70.1 68 54.4
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 8.1e-09 63.9 48 64.6
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 8.1e-09 63.9 48 64.6
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 8.1e-09 63.9 48 64.6
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 2.0e-07 59.3 33 84.8


User provided reference genes

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