Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 5.1e-154 547.7 285 100.0
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 7.4e-44 181.8 266 48.1
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 1.4e-42 177.6 290 41.0
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 5.3e-42 175.6 260 46.9
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 2.0e-41 173.7 260 46.2
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 4.5e-41 172.6 287 45.3
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 2.2e-40 170.2 269 47.6
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 2.9e-40 169.9 275 45.5
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.5e-39 166.8 277 41.5
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 2.5e-39 166.8 267 40.8
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 9.4e-39 164.9 290 43.4
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 1.2e-38 164.5 286 40.6
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 2.1e-38 163.7 290 40.7
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 2.1e-38 163.7 290 40.3
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 3.6e-38 162.9 225 49.8
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 7.9e-38 161.8 291 41.2
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 1.0e-37 161.4 274 44.2
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 1.0e-37 161.4 274 44.2
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 1.4e-37 161.0 268 41.0
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 1.4e-37 161.0 265 43.4
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 3.0e-37 159.8 280 40.7
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 6.7e-37 158.7 266 42.5
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 6.7e-37 158.7 259 45.2
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 1.1e-36 157.9 274 41.2
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 1.5e-36 157.5 293 42.0
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 2.5e-36 156.8 289 40.8
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 3.3e-36 156.4 266 44.7
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 5.7e-36 155.6 275 41.8
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 7.4e-36 155.2 271 45.8
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.3e-35 154.5 279 40.9
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 2.8e-35 153.3 262 40.8
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 3.7e-35 152.9 268 46.3
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 1.1e-34 151.4 260 43.5
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 1.4e-34 151.0 264 42.8
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 2.4e-34 150.2 290 39.3
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 4.1e-34 149.4 260 42.7
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 1.5e-33 147.5 273 40.7
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.5e-33 147.5 273 40.7
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 1.5e-33 147.5 263 43.3
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 2.0e-33 147.1 263 40.7
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 2.0e-33 147.1 265 40.8
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 6.5e-32 142.1 275 43.6
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 6.5e-32 142.1 281 40.9
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 8.5e-32 141.7 280 40.4
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 8.5e-32 141.7 267 41.9
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 8.5e-32 141.7 264 40.2
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 1.1e-31 141.4 257 42.0
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 1.9e-31 140.6 267 41.6
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 3.2e-31 139.8 262 39.7
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 3.2e-31 139.8 275 42.9
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 4.2e-31 139.4 284 42.3
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 5.5e-31 139.0 299 38.1
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 7.2e-31 138.7 263 38.8
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 7.2e-31 138.7 261 42.1
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 1.2e-30 137.9 292 37.0
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 2.7e-30 136.7 147 52.4
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 2.7e-30 136.7 307 36.8
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 3.6e-30 136.3 147 55.8
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 3.6e-30 136.3 289 40.8
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 6.1e-30 135.6 291 38.8
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 1.0e-29 134.8 291 35.4
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.0e-29 134.8 292 36.6
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 1.8e-29 134.0 265 42.3
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.8e-29 134.0 273 38.1
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 6.7e-29 132.1 304 36.5
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 8.8e-29 131.7 291 35.7
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 1.1e-28 131.3 256 39.5
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 4.4e-28 129.4 262 43.1
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 1.7e-27 127.5 333 35.1
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 2.8e-27 126.7 268 39.6
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 3.7e-27 126.3 282 36.9
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 2.4e-26 123.6 257 38.9
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 7.0e-26 122.1 282 36.2
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 9.1e-26 121.7 282 36.2
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 3.5e-25 119.8 260 36.9
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 5.9e-25 119.0 148 52.0
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 7.7e-25 118.6 351 31.1
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 1.7e-24 117.5 311 32.8
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 3.8e-24 116.3 267 37.5
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 5.0e-24 115.9 129 52.7
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 3.2e-23 113.2 257 37.4
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 2.7e-22 110.2 275 35.6
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 3.6e-22 109.8 272 33.8
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 4.7e-22 109.4 310 33.9
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 1.4e-21 107.8 264 34.8
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 2.3e-21 107.1 279 35.5
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 8.8e-21 105.1 250 36.4
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 2.6e-20 103.6 273 33.7
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 3.3e-20 103.2 276 33.7
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 5.7e-20 102.4 273 34.1
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 5.7e-20 102.4 283 36.4
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 9.7e-20 101.7 125 46.4
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 9.7e-20 101.7 233 35.6
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 1.7e-19 100.9 317 30.9
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 4.8e-19 99.4 282 33.7
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 1.4e-18 97.8 302 29.8
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 1.8e-18 97.4 225 36.0
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 5.3e-18 95.9 280 33.9
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 7.0e-18 95.5 302 29.8
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.2e-17 94.7 280 33.6
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 2.0e-17 94.0 238 36.1
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 7.7e-17 92.0 279 33.3
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 7.7e-17 92.0 276 35.9
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 1.7e-16 90.9 282 31.9
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 1.7e-16 90.9 277 31.8
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 3.8e-16 89.7 128 42.2
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 8.5e-16 88.6 270 32.2
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 1.1e-15 88.2 284 32.0
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 8.0e-14 82.0 134 43.3
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 1.0e-13 81.6 277 32.5
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 3.4e-12 76.6 279 32.3
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 3.4e-12 76.6 279 32.3
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 5.7e-12 75.9 281 30.2
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 2.2e-11 73.9 142 36.6
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 1.4e-10 71.2 157 39.5
Oeu021600.1 Olea europaea HOM05D006486 ORTHO05D007888 3.1e-10 70.1 67 58.2
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 7.7e-09 65.5 80 48.8
Nitab4.5_0001007g0050 Nicotiana tabacum HOM05D006486 ORTHO05D007888 2.5e-07 60.5 203 31.0


User provided reference genes

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