Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0108500 Rhododendron simsii HOM05D036465 ORTHO05D339503 3.9e-210 734.9 489 100.0
Rhsim02G0107300 Rhododendron simsii HOM05D036465 ORTHO05D340015 2.4e-159 566.2 496 80.6
vmacro16443 Vaccinium macrocarpon HOM05D011420 ORTHO05D019352 9.8e-28 129.0 262 38.2
Rhsim06G0023600 Rhododendron simsii HOM05D011420 ORTHO05D019352 4.7e-22 110.2 358 31.3
Rhsim02G0060500 Rhododendron simsii HOM05D011420 ORTHO05D338737 6.1e-22 109.8 247 34.8
RhsimUnG0229500 Rhododendron simsii HOM05D011420 ORTHO05D023110 3.0e-21 107.5 265 32.5
Rhsim08G0226000 Rhododendron simsii HOM05D011420 ORTHO05D338901 1.4e-18 98.6 310 30.3
vmacro16465 Vaccinium macrocarpon HOM05D000318 ORTHO05D000420 1.8e-18 98.2 245 32.7
Rhsim04G0200300 Rhododendron simsii HOM05D011420 ORTHO05D339257 2.4e-18 97.8 243 33.7
vmacro19721 Vaccinium macrocarpon HOM05D036465 ORTHO05D426857 7.8e-17 92.8 252 31.3
RhsimUnG0229100 Rhododendron simsii HOM05D011420 ORTHO05D023110 1.7e-16 91.7 117 44.4
vmacro11330 Vaccinium macrocarpon HOM05D011420 ORTHO05D427076 2.5e-15 87.8 115 44.3
vmacro05150 Vaccinium macrocarpon HOM05D011420 ORTHO05D019352 3.3e-15 87.4 94 56.4
Rhsim05G0046300 Rhododendron simsii HOM05D011420 ORTHO05D023110 4.7e-14 83.6 119 42.9
RhsimUnG0140800 Rhododendron simsii HOM05D011420 ORTHO05D023110 4.7e-14 83.6 119 42.9
vmacro18699 Vaccinium macrocarpon HOM05D011420 ORTHO05D023110 6.8e-13 79.7 158 33.5
Rhsim09G0098400 Rhododendron simsii HOM05D011420 ORTHO05D023110 2.6e-12 77.8 93 43.0
Aqoxy2G03015 Aquilegia oxysepala HOM05D005214 ORTHO05D005861 3.5e-09 67.4 129 34.9
COL.COLO4_10501 Corchorus olitorius HOM05D005214 ORTHO05D005861 1.3e-08 65.5 132 36.4
Lsat_1_v5_gn_9_87421 Lactuca sativa HOM05D005214 ORTHO05D005861 2.3e-08 64.7 134 37.3
BcaNung04541 Brassica carinata HOM05D005214 ORTHO05D005861 5.0e-08 63.5 131 35.9
BcaNung04538 Brassica carinata HOM05D005214 ORTHO05D005861 6.6e-08 63.2 131 35.9
A06p37390 Brassica napus HOM05D005214 ORTHO05D005861 6.6e-08 63.2 131 35.9
C07p40960 Brassica napus HOM05D005214 ORTHO05D005861 6.6e-08 63.2 131 35.9
BolC7t44627H Brassica oleracea HOM05D005214 ORTHO05D005861 6.6e-08 63.2 131 35.9
BraA06t26663Z Brassica rapa HOM05D005214 ORTHO05D005861 6.6e-08 63.2 131 35.9
Sp2g20820 Schrenkiella parvula HOM05D005214 ORTHO05D005861 6.6e-08 63.2 124 37.1
Thecc.05G311500 Theobroma cacao HOM05D005214 ORTHO05D005861 6.6e-08 63.2 132 34.8
CSS0000343 Camellia sinensis var. sinensis HOM05D005214 ORTHO05D005861 8.6e-08 62.8 132 37.1
CDE09G0722 Ceratophyllum demersum HOM05D005214 ORTHO05D005861 8.6e-08 62.8 131 36.6
TAR362G1097 Trochodendron aralioides HOM05D005214 ORTHO05D005861 1.9e-07 61.6 122 37.7
Duzib128G1190 Durio zibethinus HOM05D005214 ORTHO05D005861 2.5e-07 61.2 132 36.4
AL6G39370 Arabidopsis lyrata HOM05D005214 ORTHO05D005861 3.3e-07 60.8 131 35.1
AT5G27660 Arabidopsis thaliana HOM05D005214 ORTHO05D005861 3.3e-07 60.8 131 34.4
CANSAT54G2509 Cannabis sativa HOM05D005214 ORTHO05D005861 3.3e-07 60.8 133 34.6
ECA236G2130 Erigeron canadensis HOM05D005214 ORTHO05D005861 3.3e-07 60.8 134 35.8
Carub.0006s2493 Capsella rubella HOM05D005214 ORTHO05D005861 4.3e-07 60.5 131 34.4
Phvul.006G090500 Phaseolus vulgaris HOM05D005214 ORTHO05D005861 5.6e-07 60.1 124 35.5
vmacro04966 Vaccinium macrocarpon HOM05D005214 ORTHO05D005861 5.6e-07 60.1 129 37.2
GSVIVG01031122001 Vitis vinifera HOM05D005214 ORTHO05D005861 5.6e-07 60.1 132 34.8
Actinidia05683 Actinidia chinensis HOM05D005214 ORTHO05D005861 7.3e-07 59.7 132 36.4
Gohir.A08G209100 Gossypium hirsutum HOM05D005214 ORTHO05D005861 7.3e-07 59.7 124 33.9
HanXRQChr11g0339491 Helianthus annuus HOM05D005214 ORTHO05D005861 7.3e-07 59.7 134 35.1
Hund07090 Selenicereus undatus HOM05D005214 ORTHO05D005861 7.3e-07 59.7 124 37.1
Nitab4.5_0002144g0030 Nicotiana tabacum HOM05D005214 ORTHO05D005861 9.5e-07 59.3 131 35.1
Rhsim07G0186700 Rhododendron simsii HOM05D005214 ORTHO05D005861 9.5e-07 59.3 124 37.9
ATR0743G060 Amborella trichopoda HOM05D005214 ORTHO05D005861 1.2e-06 58.9 131 35.9
CAN.G619.10 Capsicum annuum HOM05D005214 ORTHO05D005861 1.2e-06 58.9 131 34.4
Gorai.004G240000 Gossypium raimondii HOM05D005214 ORTHO05D005861 1.2e-06 58.9 124 33.1
Lj9A119G25 Lonicera japonica HOM05D005214 ORTHO05D005861 1.2e-06 58.9 132 34.8
Aa31LG11G9400 Aethionema arabicum HOM05D005214 ORTHO05D005861 1.6e-06 58.5 131 34.4
Cc00_g10460 Coffea canephora HOM05D005214 ORTHO05D005861 1.6e-06 58.5 128 34.4
Thhalv10004245m.g Eutrema salsugineum HOM05D005214 ORTHO05D005861 1.6e-06 58.5 131 33.6
Manes.08G119000 Manihot esculenta HOM05D005214 ORTHO05D005861 1.6e-06 58.5 132 34.1
Sabra13G0021100 Salix brachista HOM05D005214 ORTHO05D005861 1.6e-06 58.5 132 34.1
Glyma.19G234200 Glycine max HOM05D005214 ORTHO05D005861 2.1e-06 58.2 124 33.9
Hma1.2p1_1212F.1_g267370 Hydrangea macrophylla HOM05D005214 ORTHO05D005861 2.1e-06 58.2 132 34.1
Thecc.05G311600 Theobroma cacao HOM05D005214 ORTHO05D005861 2.1e-06 58.2 134 32.8
Ciclev10001167m.g Citrus clementina HOM05D005214 ORTHO05D005861 2.8e-06 57.8 130 36.9
THA.LOC104802800 Tarenaya hassleriana HOM05D005214 ORTHO05D005861 2.8e-06 57.8 131 34.4
VMungo0540G0352 Vigna mungo HOM05D005214 ORTHO05D005861 2.8e-06 57.8 124 33.9
CARHR186180 Cardamine hirsuta HOM05D005214 ORTHO05D005861 3.6e-06 57.4 124 33.9
Nn8g40789 Nelumbo nucifera HOM05D005214 ORTHO05D005861 4.7e-06 57.0 124 36.3
PSO541G2582 Papaver somniferum HOM05D005214 ORTHO05D005861 6.2e-06 56.6 124 34.7
PSO675G4608 Papaver somniferum HOM05D005214 ORTHO05D005861 6.2e-06 56.6 124 33.9
Potri.013G018300 Populus trichocarpa HOM05D005214 ORTHO05D005861 6.2e-06 56.6 132 33.3
QL03p011667 Quercus lobata HOM05D005214 ORTHO05D005861 6.2e-06 56.6 132 34.1
QL03p021693 Quercus lobata HOM05D005214 ORTHO05D005861 6.2e-06 56.6 132 34.1
TPR.G33205 Trifolium pratense HOM05D005214 ORTHO05D005861 8.0e-06 56.2 141 29.1


User provided reference genes

Program Settings