Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0086800 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.0e-235 818.1 425 100.0
Rhsim11G0039100 Rhododendron simsii HOM05D008406 ORTHO05D010960 4.7e-143 511.9 580 54.1
Rhsim13G0002100 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.8e-142 510.0 580 54.1
RhsimUnG0189300 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.8e-142 510.0 580 54.1
Rhsim01G0161400 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.9e-142 508.8 580 54.0
RhsimUnG0190700 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.5e-141 506.9 580 54.0
Rhsim09G0075400 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.1e-139 500.7 491 60.5
Rhsim04G0192000 Rhododendron simsii HOM05D008406 ORTHO05D010960 4.5e-130 468.8 528 52.8
Rhsim05G0054300 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.6e-122 443.7 548 50.7
Rhsim04G0129500 Rhododendron simsii HOM05D008406 ORTHO05D010960 8.8e-118 427.9 506 51.8
Rhsim03G0108900 Rhododendron simsii HOM05D008406 ORTHO05D010960 8.6e-113 411.4 485 53.0
Rhsim04G0140000 Rhododendron simsii HOM05D008406 ORTHO05D010960 2.2e-108 396.7 498 50.8
Rhsim06G0114000 Rhododendron simsii HOM05D008406 ORTHO05D010960 2.7e-106 389.8 465 52.5
Rhsim04G0047800 Rhododendron simsii HOM05D008406 ORTHO05D010960 2.8e-103 379.8 469 51.4
RhsimUnG0165400 Rhododendron simsii HOM05D008406 ORTHO05D010960 8.3e-100 368.2 501 47.5
Rhsim05G0097200 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.5e-88 330.9 472 48.1
Rhsim12G0097900 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.3e-88 329.7 371 54.4
Rhsim04G0229500 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.2e-85 321.2 523 43.2
Rhsim07G0162000 Rhododendron simsii HOM05D008406 ORTHO05D010960 2.0e-77 293.9 426 48.4
Rhsim02G0192500 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.2e-74 284.6 346 50.0
Rhsim02G0063100 Rhododendron simsii HOM05D008406 ORTHO05D010960 4.4e-69 266.2 264 56.4
Rhsim07G0158000 Rhododendron simsii HOM05D008406 ORTHO05D010960 8.4e-68 261.9 482 42.3
RhsimUnG0083200 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.3e-65 254.6 416 45.7
Rhsim10G0097000 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.1e-62 243.4 281 50.9
Rhsim04G0043000 Rhododendron simsii HOM05D008406 ORTHO05D339498 7.6e-61 238.8 190 66.3
Rhsim03G0059300 Rhododendron simsii HOM05D008406 ORTHO05D339582 9.9e-61 238.4 268 54.1
Rhsim06G0074600 Rhododendron simsii HOM05D008406 ORTHO05D339876 4.6e-58 229.6 161 75.8
Rhsim01G0093200 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.9e-57 226.5 225 55.1
Rhsim06G0074500 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.9e-56 224.2 296 46.3
Rhsim13G0128300 Rhododendron simsii HOM05D008406 ORTHO05D339808 3.3e-56 223.4 300 50.0
RhsimUnG0052400 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.2e-53 214.9 216 55.6
Rhsim13G0128400 Rhododendron simsii HOM05D008406 ORTHO05D010960 5.8e-53 212.6 244 50.8
Rhsim11G0017200 Rhododendron simsii HOM05D008406 ORTHO05D010960 2.5e-51 207.2 439 36.4
Rhsim06G0145900 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.0e-49 201.8 442 40.5
Rhsim03G0059200 Rhododendron simsii HOM05D008406 ORTHO05D010960 2.9e-44 183.7 154 65.6
Rhsim01G0093300 Rhododendron simsii HOM05D010378 ORTHO05D011279 3.3e-40 170.2 254 45.7
Rhsim10G0121500 Rhododendron simsii HOM05D008406 ORTHO05D010960 4.2e-35 153.3 495 29.9
Rhsim02G0192600 Rhododendron simsii HOM05D008406 ORTHO05D340329 1.2e-34 151.8 125 67.2
Rhsim10G0118900 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.1e-30 137.1 160 48.8
Rhsim01G0168800 Rhododendron simsii HOM05D008406 ORTHO05D010960 8.5e-28 129.0 489 30.3
Rhsim05G0118300 Rhododendron simsii HOM05D008406 ORTHO05D010960 2.5e-27 127.5 166 44.6
Rhsim04G0042900 Rhododendron simsii HOM05D008406 ORTHO05D010960 6.1e-26 122.9 192 42.2
Rhsim05G0105000 Rhododendron simsii HOM05D008406 ORTHO05D010960 2.0e-24 117.9 106 57.5
Rhsim10G0077700 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.5e-21 107.1 170 44.1
vmacro21218 Vaccinium macrocarpon HOM05D015585 ORTHO05D010960 2.2e-15 87.8 102 42.2
Rhsim01G0120000 Rhododendron simsii HOM05D008406 ORTHO05D340286 6.3e-15 86.3 104 44.2
Rhsim05G0105100 Rhododendron simsii HOM05D008406 ORTHO05D338787 1.3e-12 78.6 85 51.8
Rhsim12G0098000 Rhododendron simsii HOM05D008406 ORTHO05D338771 1.6e-10 71.6 71 56.3
vmacro04996 Vaccinium macrocarpon HOM05D010755 ORTHO05D012899 8.0e-10 69.3 105 35.2
Rhsim03G0035300 Rhododendron simsii HOM05D008626 ORTHO05D010919 4.0e-09 67.0 147 29.9
Rhsim13G0157900 Rhododendron simsii HOM05D008626 ORTHO05D005393 8.8e-09 65.9 265 26.0
RhsimUnG0052300 Rhododendron simsii HOM05D008406 ORTHO05D010960 2.0e-08 64.7 37 83.8
Rhsim02G0063000 Rhododendron simsii HOM05D008406 ORTHO05D339226 5.7e-08 63.2 86 47.7
RhsimUnG0034200 Rhododendron simsii HOM05D008626 ORTHO05D010919 5.7e-08 63.2 128 32.0
Rhsim01G0111300 Rhododendron simsii HOM05D008626 ORTHO05D010919 1.3e-07 62.0 223 27.8
CSS0011259 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.2e-07 61.2 104 36.5
Rhsim08G0006800 Rhododendron simsii HOM05D008626 ORTHO05D010919 2.8e-07 60.8 219 27.4
RhsimUnG0052500 Rhododendron simsii HOM05D008406 ORTHO05D339657 2.8e-07 60.8 56 62.5
RhsimUnG0191600 Rhododendron simsii HOM05D008626 ORTHO05D010919 2.8e-07 60.8 198 29.3
Rhsim01G0087400 Rhododendron simsii HOM05D008626 ORTHO05D010919 3.7e-07 60.5 210 28.6
Rhsim04G0054700 Rhododendron simsii HOM05D008626 ORTHO05D010919 4.8e-07 60.1 219 27.4
Rhsim13G0183200 Rhododendron simsii HOM05D008626 ORTHO05D010919 4.8e-07 60.1 209 28.2
Rhsim03G0010200 Rhododendron simsii HOM05D008626 ORTHO05D010919 1.1e-06 58.9 308 24.7
Rhsim04G0103900 Rhododendron simsii HOM05D008626 ORTHO05D010919 1.1e-06 58.9 79 36.7
Rhsim05G0109000 Rhododendron simsii HOM05D008626 ORTHO05D010919 1.1e-06 58.9 308 24.7
Rhsim05G0211400 Rhododendron simsii HOM05D008626 ORTHO05D010919 1.1e-06 58.9 308 24.7
Rhsim11G0150700 Rhododendron simsii HOM05D008626 ORTHO05D010919 1.1e-06 58.9 308 24.7
RhsimUnG0076200 Rhododendron simsii HOM05D008626 ORTHO05D010919 1.1e-06 58.9 308 24.7
CSS0007901 Camellia sinensis var. sinensis HOM05D012151 ORTHO05D006018 1.4e-06 58.5 251 29.1
Rhsim02G0093100 Rhododendron simsii HOM05D008626 ORTHO05D010919 1.8e-06 58.2 228 26.8
Rhsim05G0184100 Rhododendron simsii HOM05D008626 ORTHO05D010919 1.8e-06 58.2 307 23.8
Rhsim12G0032000 Rhododendron simsii HOM05D008626 ORTHO05D010919 1.8e-06 58.2 172 31.4
Rhsim01G0019100 Rhododendron simsii HOM05D008626 ORTHO05D010919 2.4e-06 57.8 226 26.1
CSS0011457 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 5.3e-06 56.6 105 30.5
Rhsim05G0023800 Rhododendron simsii HOM05D008626 ORTHO05D010919 5.3e-06 56.6 210 28.6
Rhsim13G0131400 Rhododendron simsii HOM05D008406 ORTHO05D339820 5.3e-06 56.6 175 29.1
CSS0040911 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 7.0e-06 56.2 104 34.6
Rhsim08G0126400 Rhododendron simsii HOM05D008626 ORTHO05D010919 7.0e-06 56.2 180 27.8
CSS0025081 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 9.1e-06 55.8 119 31.1
CSS0031550 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 9.1e-06 55.8 108 30.6
Rhsim10G0201400 Rhododendron simsii HOM05D008626 ORTHO05D010919 9.1e-06 55.8 242 26.0
Rhsim11G0109400 Rhododendron simsii HOM05D008626 ORTHO05D010919 9.1e-06 55.8 210 27.1


User provided reference genes

Program Settings