Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0080100 Rhododendron simsii HOM05D007873 ORTHO05D008474 3.2e-110 401.7 198 100.0
RhsimUnG0137100 Rhododendron simsii HOM05D007873 ORTHO05D008474 3.5e-53 212.2 160 71.9
MD08G1097300 Malus domestica HOM05D007873 ORTHO05D008474 2.6e-27 126.3 158 50.0
Hma1.2p1_0383F.1_g140660 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 5.5e-22 108.6 145 49.0
Manes.04G007400 Manihot esculenta HOM05D007873 ORTHO05D008474 1.6e-21 107.1 140 45.0
Sed0019767 Sechium edule HOM05D007873 ORTHO05D008474 1.0e-20 104.4 144 42.4
Manes.04G007500 Manihot esculenta HOM05D007873 ORTHO05D008474 1.8e-20 103.6 140 43.6
ClCG08G004150 Citrullus lanatus HOM05D007873 ORTHO05D008474 2.6e-19 99.8 165 40.0
Manes.04G007700 Manihot esculenta HOM05D007873 ORTHO05D008474 4.4e-19 99.0 143 42.0
Manes.04G007600 Manihot esculenta HOM05D007873 ORTHO05D008474 3.7e-18 95.9 140 42.1
Prupe.1G294700 Prunus persica HOM05D007873 ORTHO05D008474 3.7e-18 95.9 123 43.1
Prupe.1G294500 Prunus persica HOM05D007873 ORTHO05D008474 6.3e-18 95.1 124 41.9
MD06G1085500 Malus domestica HOM05D007873 ORTHO05D008474 8.3e-18 94.7 123 47.2
Hma1.2p1_1730F.1_g299700 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 1.8e-17 93.6 160 40.6
Sed0008584 Sechium edule HOM05D007873 ORTHO05D008474 5.4e-17 92.0 143 42.0
Sed0002766 Sechium edule HOM05D007873 ORTHO05D008474 7.0e-17 91.7 146 39.7
Prupe.1G294800 Prunus persica HOM05D007873 ORTHO05D008474 1.6e-16 90.5 120 43.3
Hma1.2p1_1796F.1_g302770 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 2.7e-16 89.7 160 39.4
MD06G1085400 Malus domestica HOM05D007873 ORTHO05D008474 2.7e-16 89.7 91 51.6
Prupe.1G294900 Prunus persica HOM05D007873 ORTHO05D008474 2.7e-16 89.7 128 43.0
Sed0019792 Sechium edule HOM05D007873 ORTHO05D008474 7.7e-16 88.2 135 43.0
CsaV3_6G003670 Cucumis sativus L. HOM05D007873 ORTHO05D008474 1.3e-15 87.4 144 36.1
MELO3C011620.2 Cucumis melo HOM05D007873 ORTHO05D008474 2.2e-15 86.7 164 34.1
Hma1.2p1_0383F.1_g140670 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 2.2e-15 86.7 141 44.7
MD00G1065500 Malus domestica HOM05D007873 ORTHO05D008474 5.0e-15 85.5 129 40.3
Hma1.2p1_1489F.1_g286630 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 8.5e-15 84.7 153 39.9
ClCG08G004130 Citrullus lanatus HOM05D007873 ORTHO05D008474 2.7e-13 79.7 154 38.3
ClCG09G009010 Citrullus lanatus HOM05D007873 ORTHO05D008474 4.7e-13 79.0 148 33.8
Sed0015780 Sechium edule HOM05D007873 ORTHO05D008474 8.8e-12 74.7 149 38.3
ClCG11G001040 Citrullus lanatus HOM05D007873 ORTHO05D008474 2.0e-11 73.6 152 36.2
Sed0001232 Sechium edule HOM05D007873 ORTHO05D008474 2.6e-11 73.2 150 36.0
Gorai.013G087700 Gossypium raimondii HOM05D007873 ORTHO05D008474 3.4e-11 72.8 162 33.3
Gohir.D13G076700 Gossypium hirsutum HOM05D007873 ORTHO05D008474 5.7e-11 72.0 143 35.7
Sed0008796 Sechium edule HOM05D007873 ORTHO05D008474 9.8e-11 71.2 155 34.2
CANSAT11G2400 Cannabis sativa HOM05D019586 ORTHO05D008474 1.7e-10 70.5 137 33.6
CANSAT11G1894 Cannabis sativa HOM05D019586 ORTHO05D008474 6.3e-10 68.6 143 32.2
Sed0020612 Sechium edule HOM05D007873 ORTHO05D008474 1.4e-09 67.4 146 32.2
ClCG08G004120 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.8e-09 67.0 147 35.4
DCAR_007849 Daucus carota HOM05D007873 ORTHO05D008474 1.8e-09 67.0 154 34.4
DCAR_007850 Daucus carota HOM05D007873 ORTHO05D008474 1.8e-09 67.0 154 34.4
Gohir.A13G077500 Gossypium hirsutum HOM05D007873 ORTHO05D008474 2.4e-09 66.6 144 35.4
MELO3C025120.2 Cucumis melo HOM05D007873 ORTHO05D008474 9.2e-09 64.7 131 31.3
ClCG08G004200 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.6e-08 63.9 131 32.8
CsaV3_5G024290 Cucumis sativus L. HOM05D007873 ORTHO05D008474 2.7e-08 63.2 131 32.8
MELO3C029150.2 Cucumis melo HOM05D007873 ORTHO05D008474 3.5e-08 62.8 132 30.3
Sed0008206 Sechium edule HOM05D007873 ORTHO05D008474 4.5e-08 62.4 159 28.3
Sed0009445 Sechium edule HOM05D007873 ORTHO05D008474 1.7e-07 60.5 122 34.4
Sed0026151 Sechium edule HOM05D007873 ORTHO05D008474 1.7e-07 60.5 144 31.9
Gohir.A13G077400 Gossypium hirsutum HOM05D007873 ORTHO05D008474 1.9e-06 57.0 141 31.2
Aqoxy4G00463 Aquilegia oxysepala HOM05D007873 ORTHO05D008474 7.3e-06 55.1 143 34.3


User provided reference genes

Program Settings